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1.
Phys Chem Chem Phys ; 17(31): 20308-21, 2015 Aug 21.
Article in English | MEDLINE | ID: mdl-26190017

ABSTRACT

Water oxidation by Ti(OH)4 in the ground and excited states was investigated using density functional (ΔSCF, TDDFT) methods gauged by the coupled cluster (CCSD, CCSD(T)) calculations. O2 and H2 are generated in a reaction sequence that starts with Ti(OH)4 reacting with H2O. This reaction can proceed by either nucleophilic attack by H2O or by H-atom abstraction from H2O. The nucleophilic attack has high energy barriers (40-120 kcal mol(-1)) in both the ground and excited states. On the other hand, H abstraction is effected by Ti(OH)4 in the excited state with a low energy barrier (4-8 kcal mol(-1)), generating OH˙. This is the rate-limiting barrier in the chain of O2 formation reactions proposed in this work. The production of free OH˙ radicals is not energetically feasible in the ground state. By absorbing two photons, two hydroxyl radicals are produced, which then form H2O2. By a stepwise H-abstraction from H2O2 and OOH˙, O2 is generated by absorbing two more photons. In each H-abstraction reaction a Ti(OH)4 is consumed and a Ti(OH)3H2O is produced. H2 production can proceed thermally from the latter in a very exothermic (68-105 kcal mol(-1)) bimolecular reaction. The solvent effects, modelled by explicit water molecules, have a limited influence on the reactivity.

2.
Phys Chem Chem Phys ; 16(16): 7315-23, 2014 Apr 28.
Article in English | MEDLINE | ID: mdl-24622994

ABSTRACT

Enantiomeric excess (ee) in asymmetric catalysis may be strongly dependent on the solvent. The reaction product may range from an almost racemic mixture to an ee of over 90% for different solvents. We study this phenomenon for the C-C coupling reaction between nitromethane and benzaldehyde (the Henry reaction) with cinchona thiourea as the catalyst, where solvents that are strong Lewis bases induce a high ee. We show that the effect of the solvent does not consist of a change in the reaction mechanism. Instead, the solvation "prepares" the molecule, which is very flexible, in a specific conformation. The reaction barriers in this conformer are not lower than for other conformers, but are sufficiently differentiated between the enantiomers to give rise to a large ee. It is the strong Lewis basicity of the solvent that leads to the clear preference in solution for the "asymmetric" conformer. Although general rules or predictions for how solvent effects could be harnessed to produce a desired ee in general would be hard to formulate, this study does show that it is in this case (and presumably in many other cases as well) specific solute-solvent interactions rather than effects of the dielectric continuum of the solvent that are the root cause of the solvent effect. This is in agreement with experiment for the Henry reaction.

3.
J Comput Chem ; 34(10): 870-8, 2013 Apr 05.
Article in English | MEDLINE | ID: mdl-23281098

ABSTRACT

We investigate basis set convergence for a series of density functional theory (DFT) functionals (both hybrid and nonhybrid) and compare to coupled-cluster with single and double excitations and perturbative triples [CCSD(T)] benchmark calculations. The case studied is the energetics of the water oxidation reaction by an iridium-oxo complex. Complexation energies for the reactants and products complexes as well as the transition state (TS) energy are considered. Contrary to the expectation of relatively weak basis set dependence for DFT, the basis set effects are large, for example, more than 10 kcal mol(-1) difference from converged basis for the activation energy with "small" basis sets (DZ/6-31G** for Ir/other atoms, or SVP) and still more than 6 kcal mol(-1) for def2-TZVPP/6-31G**. Inclusion of the dispersion correction in DFT-D3 schemes affects the energies of reactant complex (RC), TS, and product complex (PC) by almost the same amount; it significantly improves the complexation energy (the formation of RC), but has little effect on the activation energy with respect to RC. With converged basis, some pure GGAs (PBE-D3, BP86-D3) as well as the hybrid functional B3LYP-D3 are very accurate compared to benchmark CCSD(T) calculations.


Subject(s)
Iridium/chemistry , Organometallic Compounds/chemistry , Quantum Theory , Water/chemistry , Catalysis , Molecular Structure , Oxidation-Reduction
4.
J Chem Theory Comput ; 7(7): 2189-99, 2011 Jul 12.
Article in English | MEDLINE | ID: mdl-26606488

ABSTRACT

We report a theoretical study of the photoisomerization step in the operating cycle of a prototypical fluorene-based molecular rotary motor (1). The potential energy surfaces of the ground electronic state (S0) and the first singlet excited state (S1) are explored by semiempirical quantum-chemical calculations using the orthogonalization-corrected OM2 Hamiltonian in combination with a multireference configuration interaction (MRCI) treatment. The OM2/MRCI results for the S0 and S1 minima of the relevant 1-P and 1-M isomers and for the corresponding S0 transition state are in good agreement with higher-level calculations, both with regard to geometries and energetics. The S1 surface is characterized at the OM2/MRCI level by locating two S0-S1 minimum-energy conical intersections and nearby points on the intersection seam and by computing energy profiles for pathways toward these MECIs. Semiclassical Tully-type trajectory surface hopping (TSH) simulations with on-the-fly OM2/MRCI calculations are carried out to study the excited-state dynamics after photoexcitation to the S1 state. Fast relaxation to the ground state is observed through the conical intersection regions, predominantly through the lowest-energy one with a strongly twisted central C═C double bond and pyramidalized central carbon atom. The excited-state lifetimes for the direct and inverse photoisomerization reactions (1.40 and 1.79 ps) and the photostationary state ratio (2.7:1) from the TSH-OM2 simulations are in good agreement with the available experimental data (ca. 1.7 ps and 3:1). Excited-state lifetimes, photostationary state ratio, and dynamical details of the TSH-OM2 simulations also agree with classical molecular dynamics simulations using a reparametrized optimized potentials for liquid simulations (OPLS) all-atom force field with ad-hoc surface hops at predefined conical intersection points. The latter approach allows for a more extensive statistical sampling.

5.
Phys Chem Chem Phys ; 12(37): 11238-44, 2010 Oct 07.
Article in English | MEDLINE | ID: mdl-20676414

ABSTRACT

Rhodamine B (RhB) is widely used in chemistry and biology due to its high fluorescence quantum yield. In high concentrations, the quantum yield of fluorescence decreases considerably which is attributed to the formation of RhB dimers. In the present work, a possible mechanism of fluorescence quenching in RhB dimers is investigated with the use of time-dependent density functional theory (TD-DFT). The excited states of monomeric and dimeric RhB species have been studied both in the gas phase and in solution with the use of the TD-BLYP/6-311G* method. Results of the calculations suggest that quenching can occur via an internal conversion to the charge-transfer singlet excited states, which can be followed by an intersystem crossing with the charge-transfer triplet states. A possibility to reduce the loss of the fluorescence quantum yield is discussed.

6.
J Phys Chem A ; 114(15): 5058-67, 2010 Apr 22.
Article in English | MEDLINE | ID: mdl-20349978

ABSTRACT

Light-driven molecular rotary motors derived from chiral overcrowded alkenes represent a broad class of compounds for which photochemical rearrangements lead to large scale motion of one part of the molecule with respect to another. It is this motion/change in molecular shape that is employed in many of their applications. A key group in this class are the molecular rotary motors that undergo unidirectional light-driven rotation about a double bond through a series of photochemical and thermal steps. In the present contribution we report a combined quantum chemical and molecular dynamics study of the mechanism of the rotational cycle of the fluorene-based molecular rotary motor 9-(2,4,7-trimethyl-2,3-dihydro-1H-inden-1-ylidene)-9H-fluorene (1). The potential energy surfaces of the ground and excited singlet states of 1 were calculated, and it was found that conical intersections play a central role in the mechanism of photo conversion between the stable conformer of 1 and its metastable conformer. Molecular dynamics simulations indicate that the average lifetime of the fluorene motor in the excited state is 1.40 +/- 0.10 ps when starting from the stable conformer, which increases to 1.77 +/- 0.13 ps for the reverse photoisomerization. These simulations indicate that the quantum yield of photoisomerization of the stable conformer is 0.92, whereas it is only 0.40 for the reverse photoisomerization. For the first time, a theoretical understanding of the experimentally observed photostationary state of 1 is reported that provides a detailed picture of the photoisomerization dynamics in overcrowded alkene-based molecular motor 1. The analysis of the electronic structure of the fluorene molecular motor holds considerable implications for the design of molecular motors. Importantly, the role of pyramidalization and conical intersections offer new insight into the factors that dominate the photostationary state achieved in these systems.


Subject(s)
Fluorenes/chemistry , Light , Photochemical Processes , Rotation , Isomerism , Molecular Conformation , Molecular Dynamics Simulation , Quantum Theory
7.
J Phys Chem A ; 113(43): 11630-4, 2009 Oct 29.
Article in English | MEDLINE | ID: mdl-19627111

ABSTRACT

Potential energy surfaces of the ground and the first excited singlet states of the (3R,3'R)-(P,P)-trans-1,1',2,2',3,3',4,4'-octahydro-3,3'-dimethyl-4,4'-biphenanthrylidene rotary molecular motor have been investigated along the central C(4)=C(4') double bond twisting mode starting from the (P,P)-trans and from the (P,P)-cis conformations occurring in the photoisomerization cycle of this compound. The potential energy profiles obtained with the help of the state average spin restricted ensemble-referenced Kohn-Sham (SA-REKS) method feature minima on the excited state surface, the positions of which are displaced with respect to the barriers on the ground state surface toward the isomerization products, the (M,M)-cis and the (M,M)-trans conformations, respectively. The origin of these minima is analyzed and explained. The results of the present study suggest that the experimentally observed unidirectionality of photoinduced rotation in the above compound can be corroborated by the obtained profiles of the ground and excited state potential energy surfaces.

8.
J Phys Chem A ; 112(50): 12980-8, 2008 Dec 18.
Article in English | MEDLINE | ID: mdl-18616234

ABSTRACT

A time-independent density functional approach to the calculation of excitation energies from the ground states of molecules typified by the strong nondynamic electron correlation is suggested. The new method is based on the use of the spin-restricted ensemble-referenced Kohn-Sham formalism [Filatov, M.; Shaik, S. Chem. Phys. Lett. 1999, 304, 429] for the calculation of the ground state. In the new method, the average energy of the ground state and a state created by a single excitation thereof is minimized with respect to the Kohn-Sham orbitals and their fractional occupation numbers. The lowest singlet excitation energies obtained with the help of the new formalism for a number of model systems, such as the hydrogen molecule with stretched bond, twisted ethylene, and twisted hexa-1,3,5-triene, are compared with the results of the time-dependent density functional theory, with the results of ab initio CASSCF/CASPT2 calculations, and with the experimental data. Applicability of the new method to the description of photochemical reactions is discussed.

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