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1.
PLoS One ; 12(11): e0187758, 2017.
Article in English | MEDLINE | ID: mdl-29155841

ABSTRACT

Soil fungi associated with plant roots, notably ectomycorrhizal (EcM) fungi, are central in above- and below-ground interactions in Mediterranean forests. They are a key component in soil nutrient cycling and plant productivity. Yet, major disturbances of Mediterranean forests, particularly in the Southern Mediterranean basin, are observed due to the greater human pressures and climate changes. These disturbances highly impact forest cover, soil properties and consequently the root-associated fungal communities. The implementation of efficient conservation strategies of Mediterranean forests is thus closely tied to our understanding of root-associated fungal biodiversity and environmental rules driving its diversity and structure. In our study, the root-associated fungal community of Q. suber was analyzed using high-throughput sequencing across three major Moroccan cork oak habitats. Significant differences in root-associated fungal community structures of Q. suber were observed among Moroccan cork oak habitats (Maâmora, Benslimane, Chefchaoun) subjected to different human disturbance levels (high to low disturbances, respectively). The fungal community structure changes correlated with a wide range of soil properties, notably with pH, C:N ratio (P = 0.0002), and available phosphorus levels (P = 0.0001). More than 90 below-ground fungal indicators (P < 0.01)-either of a type of habitat and/or a soil property-were revealed. The results shed light on the ecological significance of ubiquitous ectomycorrhiza (Tomentella, Russula, Cenococcum), and putative sclerotia-associated/ericoid mycorrhizal fungal taxa (Cladophialophora, Oidiodendron) in the Moroccan cork oak forest, and their intraspecific variability regarding their response to land use and soil characteristics.


Subject(s)
Nitrogen Fixation/genetics , Phylogeny , Plant Roots/microbiology , Quercus/microbiology , Ascomycota/genetics , Ascomycota/metabolism , Basidiomycota/genetics , Basidiomycota/metabolism , Biodiversity , Ecosystem , Forests , High-Throughput Nucleotide Sequencing , Morocco , Phosphorus/metabolism , Plant Roots/growth & development , Plant Roots/metabolism , Quercus/growth & development , Quercus/metabolism , Soil/chemistry , Soil Microbiology
2.
C R Biol ; 340(5): 298-305, 2017 May.
Article in French | MEDLINE | ID: mdl-28506468

ABSTRACT

The cork oak forest is an ecosystem playing a major role in Moroccan socio-economy and biodiversity conservation. However, this ecosystem is negatively impacted by extensive human- and climate-driven pressures, causing a strong decrease in its distribution and a worsening of the desertification processes. This study aims at characterising the impact of cork oak forest management on a major actor of its functioning, the ectomycorrhizal (EcM) fungal community associated with Quercus suber, and the determination of EcM bio-indicators. The EcM fungal community has been monitored during spring and winter seasons in two sites of the Moroccan Mâamora forest, corresponding to a forest site either impacted by human activities or protected. A significant impact of cork oak forest management on the EcM fungal community has been revealed, with major differences during the summer season. The results confirmed the potential ecological significance of several EcM fungi (e.g., Cenococcum) in the sustainability of the cork oak forest functioning, but also the significant association of certain EcM fungi (Pachyphloeus, Russula, Tomentella) with a perturbation or a season, and consequently to the cork oak forest status or to climatic conditions, respectively. The development of study at the Mediterranean scale may improve the robustness of ecological models to predict the impact of global changes on this emblematic ecosystem of Mediterranean basin.


Subject(s)
Biodiversity , Ecosystem , Mycorrhizae , Quercus , Ascomycota , Basidiomycota , Conservation of Natural Resources , Forests , Humans , Morocco , Seasons
3.
Can J Microbiol ; 63(5): 450-463, 2017 May.
Article in English | MEDLINE | ID: mdl-28235183

ABSTRACT

A total of 51 bacterial strains were isolated from root nodules of Scorpiurus muricatus sampled from 6 regions of western Algeria. Strain diversity was assessed by rep-PCR amplification fingerprinting, which grouped the isolates into 28 different clusters. Partial nucleotide sequencing of the 16S rRNA gene and BLAST analysis revealed that root nodules of S. muricatus were colonized by different species close to Rhizobium vignae, Rhizobium radiobacter, Rhizobium leguminosarum, Phyllobacterium ifriqiyense, Phyllobacterium endophyticum, Starkeya sp., and Pseudomonas sp. However, none of these strains was able to form nodules on its host plant; even nodC was present in a single strain (SMT8a). The inoculation test showed a great improvement in the growth of inoculated plants compared with noninoculated control plants. A significant amount of indole acetic acid was produced by some strains, but only 2 strains could solubilize phosphate. In this report we described for the first time the diversity of bacteria isolated from root nodules of S. muricatus growing in different regions in western Algeria and demonstrated their potential use in promoting plant growth.


Subject(s)
Bacteria/isolation & purification , Fabaceae/microbiology , Algeria , Alphaproteobacteria/genetics , Alphaproteobacteria/isolation & purification , Bacteria/classification , Bacteria/genetics , Biodiversity , Indoleacetic Acids/metabolism , Phylogeny , Plant Development , Plant Roots/microbiology , RNA, Ribosomal, 16S , Rhizobium/genetics , Rhizobium/isolation & purification
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