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Org Biomol Chem ; 15(24): 5109-5111, 2017 Jun 28.
Article in English | MEDLINE | ID: mdl-28470278

ABSTRACT

Various DNA conformational changes are in correlation with biological events. In particular, DNA B-Z equilibrium showed a high correlation with translation and transcription. In this study, we developed a DNA probe containing 5-trifluoromethylcytidine or 5-trifluoromethylthymidine to detect DNA B-Z equilibrium using 19F-NMR. Its probe enabled the quantitative detection of B-, Z-, and ss-DNA based on 19F-NMR chemical shift change.


Subject(s)
DNA, B-Form/analysis , DNA, B-Form/chemistry , DNA, Single-Stranded/analysis , DNA, Single-Stranded/chemistry , DNA, Z-Form/analysis , DNA, Z-Form/chemistry , Fluorine , Magnetic Resonance Spectroscopy/standards , Nucleic Acid Conformation , Reference Standards
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