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1.
BMC Genomics ; 24(1): 667, 2023 Nov 06.
Article in English | MEDLINE | ID: mdl-37932698

ABSTRACT

BACKGROUND: The gut microbiota is considered a rich source for potential novel probiotics. Enterococcus genus is a normal component of a healthy gut microbiota, suggesting its vital role. Nosocomial infections caused mainly by E. facalis and E. faecium have been attributed to the plasticity of the Enterococcus genomes. In this study, we assessed the probiotic and safety characteristics of two E. lactis strains isolated from the human gut microbiota using in-vitro and in silico approaches. Additionally, the safety of the E. lactis species was evaluated using comparative genomics analysis. RESULTS: The two E. lactis strains 10NA and 50NA showed resistance to bile salts and acid tolerance with antibacterial activity against Escherichia coli, Salmonella typhi, and Clostridioides difficile. For safety assays, the two strains did not display any type of hemolysis on blood agar, and the survival of Caco-2 cells was not significantly different (P-value > 0.05) compared to the control using cell free supernatants at 100% (v/v), 50% (v/v), 10% (v/v), and 5% (v/v) concentrations. Regarding antibiotic susceptibility, both strains were sensitive to vancomycin, tetracycline, and chloramphenicol. Comprehensive whole-genome analysis revealed no concerning associations between virulence or antibiotic resistance genes and any of the identified mobile genetic elements. Comparative genome analysis with closely related E. faecium species genomes revealed the distinctive genomic safety of the E. lactis species. CONCLUSIONS: Our two E. lactis strains showed promising probiotic properties in-vitro. Their genomes were devoid of any transferable antibiotic resistance genes. In silico comparative analysis confirmed the safety of the E. lactis species. These results suggest that E. lactis species could be a potential source for safer Enterococcus probiotic supplements.


Subject(s)
Enterococcus faecium , Probiotics , Humans , Caco-2 Cells , Microbial Sensitivity Tests , Enterococcus/genetics , Anti-Bacterial Agents , Genomics , Enterococcus faecium/genetics
2.
Microb Drug Resist ; 29(9): 407-415, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37579256

ABSTRACT

Background: Shiga toxin-producing Escherichia coli (STEC) has been identified as an important etiologic agent of human disease in Egypt. Aims: To investigate the occurrence and describe the characterization as well as prevalence of STEC in Greater Cairo hospitals as well as molecular characterization of virulence and resistance genes. Methods: Four hundred seventy E. coli clinical isolates were collected from eight hospitals and analyzed by genotypic and phenotypic methods for STEC, followed by histopathological examination and scoring of different organs lesions. Results: The highest proportion of isolates was from urine (151 isolates), whereas the lowest was from splenic drain (3 isolates). In tandem, when serogrouping was performed, 15 serogroups were obtained where the most prevalent was O157 and the least prevalent was O151. All isolates were positive when screened for identity gene gad A, while only typable strains were screened for seven virulence genes stx1 (gene encoding Shiga toxin 1), stx2 (gene encoding Shiga toxin 2), tsh (gene encoding thermostable hemagglutinin), eaeA (gene encoding intimin), invE (gene encoding invasion protein), aggR (gene encoding aggregative adherence transcriptional regulator), and astA (aspartate transaminase) where the prevalence was 48%, 30%, 50%, 57%, 7.5%, 12%, and 58%, respectively. Of 254 typable isolates, 152 were STEC carrying stx1 or stx2 genes or both. Conclusions: Relying on in vivo comparison between different E. coli pathotypes via histopathological examination of different organs, E. coli pathotypes could be divided into mild virulent, moderate virulent, and high virulent strains. Statistical analysis revealed significant correlation between different serogroups and presence of virulence genes.


Subject(s)
Escherichia coli Infections , Escherichia coli Proteins , Shiga-Toxigenic Escherichia coli , Humans , Shiga-Toxigenic Escherichia coli/genetics , Virulence/genetics , Prevalence , Escherichia coli Proteins/genetics , Anti-Bacterial Agents/pharmacology , Microbial Sensitivity Tests , Virulence Factors/genetics , Escherichia coli Infections/drug therapy , Escherichia coli Infections/epidemiology , Feces
3.
Int J Mol Sci ; 24(13)2023 Jun 27.
Article in English | MEDLINE | ID: mdl-37445869

ABSTRACT

Polycyclic aromatic hydrocarbons, e.g., benzo[a]pyrene (BaP), are common dietary pollutants with potential carcinogenic activity, while polyphenols are potential chemopreventive antioxidants. Although several health benefits are attributed to polyphenol-rich pomegranate, little is known about its interaction with BaP. This study integrates histochemical, microbiomic, and metabolomic approaches to investigate the protective effects of pomegranate juice from BaP-induced pathologies. To this end, 48 Sprague-Dawley rats received, for four weeks, either pomegranate, BaP, both, or neither (n = 12 rats per group). Whereas histochemical examination of the colon indicated tissue damage marked by mucin depletion in BaP-fed animals, which was partially restored by administration of pomegranate juice, the fecal microbiome and metabolome retained their resilience, except for key changes related to pomegranate and BaP biotransformation. Meanwhile, dramatic microbiome restructuring and metabolome shift were observed as a consequence of the elapsed time (age factor). Additionally, the analysis allowed a thorough examination of fecal microbiome-metabolome associations, which delineated six microbiome clusters (marked by a differential abundance of Lactobacillaceae and Prevotellaceae, Rumincococcaceae, and Erysipelotrichaceae) and two major metabolome clusters (a sugar- and amino-acids-dominated metabotype vs. a cluster of fatty acids and hydrocarbons), with sugar alcohols maintaining a unique signature. In conclusion, using paired comparisons to minimize inter-individual animal variations allowed the dissection of temporal vs. treatment-derived variations. Microbiome-metabolome association clusters may be further exploited for metabotype prediction and gut-health biomarker discovery.


Subject(s)
Microbiota , Pomegranate , Rats , Animals , Rats, Sprague-Dawley , Metabolomics , Colon , Computational Biology , Pyrenes , Benzo(a)pyrene/toxicity
4.
Plast Reconstr Surg Glob Open ; 10(10): e4575, 2022 Oct.
Article in English | MEDLINE | ID: mdl-36299823

ABSTRACT

Soft tissue knee defects are frequently seen in surgical practice. The saphenous artery (SA)-based flap is a management option with variable suggested donor sites. The present study describes the use of an SA-based flap harvested from the posteromedial aspect of the leg in management of soft tissue knee defects. Methods: The present study recruited 30 patients with soft tissue knee defects due to miscellaneous causes. All patients were treated with an SA-based flap harvested from the posteromedial aspect of the leg. All patients were followed up for 6 months. Outcome parameters included flap survival, flap complications, and restoration of knee function. Results: After 6 months of follow-up, all flaps survived; the reported complications were distal flap necrosis (6.7%), wound dehiscence (6.7%), seroma (3.3%), and small contracture band (3.3%). All patients restored normal range of motion around the knee. Conclusion: An SA-based flap harvested from the posteromedial aspect of the leg is a feasible, safe, and effective option for management of soft tissue knee defects.

5.
World J Microbiol Biotechnol ; 38(11): 187, 2022 Aug 16.
Article in English | MEDLINE | ID: mdl-35972564

ABSTRACT

Ciprofloxacin (CIP) and levofloxacin (LEV), widely used fluoroquinolone antibiotics, are often found in sewage from the sewage treatment plants and marine environment. In this study, CIP and LEV biodegrading bacterial consortia were obtained from industrial wastewater. Microorganisms in these consortia were identified as Acinetobacter baumannii (A. baumannii), Klebsiella pneumoniae (K. pneumoniae) and Elizabethkingia miricola (E. miricola). The impacts of the critical operating parameters on the elimination of CIP and LEV by bacterial consortia have been investigated and optimized to achieve the maximum levels of CIP and LEV biodegradation. Using liquid chromatography with tandem mass spectrometry (LC-MS-MS), possible degradation pathways for CIP and LEV were suggested by analyzing the intermediate degradation products. The role of the enzymes fluoroquinolone-acetylating aminoglycoside (6'-N-acetyltransferase) and cytochrome P450 (CYP450) in the breakdown of fluoroquinolones (FQs) was investigated as well. According to our findings, various biodegradation mechanisms have been suggested, including cleavage of piperazine ring, substitution of F atom, hydroxylation, decarboxylation, and acetylation, as the main biotransformation reactions. This study discovers the ability of non-reported bacterial strains to biodegrade both CIP and LEV as a sole carbon source, providing new insights into the biodegradation of CIP and LEV.


Subject(s)
Acinetobacter baumannii , Fluoroquinolones , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Bacteria , Ciprofloxacin , Flavobacteriaceae , Klebsiella pneumoniae , Levofloxacin , Sewage , Wastewater
6.
Sci Rep ; 12(1): 5634, 2022 04 04.
Article in English | MEDLINE | ID: mdl-35379880

ABSTRACT

The effect of submerging geopolymer mortar samples in highly acidic solution for 7-, 28-, and 90-days on stability of mass and the development of compressive strength development was assessed experimentally. The mortar binder consisted of GGBS or blends of GGBS and fly ash activated using combinations of NaOH and Na2SiO3 solutions, and samples were cured in room temperature. It was found that maintaining mortar samples continuously under sulfuric acid doesn't cause reduction compressive strength or mass from one age to the other, up to 90 days. While decalcification, delaumination, and formation of calcium salts due to sulfate attack may have affected mass and strength, submerging samples under water supported formation of geopolymerization products C-A-S-H and N-A-S-H, and consequently increased the mass and compressive strength of cubic mortar samples with fly ash + GGBS blended binder. The resistance of mortar to sulfuric acid remained consistent when mortars were prepared using GGBS:fly ash ratio of 3:1, equal amounts of GGBS and fly ash, and GGBS as sole binder. When geopolymer mortar samples made with each of the three binders was left exposed to air after casting, compressive strength increased from 7- to 28-days after casting, but at 90-days, all mortar samples experienced decrease in compressive strength relative to the 28-day values. The relatively high content of GGBS (≥ 50%) and absence of curing water in relatively dry conditions caused shrinkage cracking and decrease in compressive strength.


Subject(s)
Construction Materials , Sulfuric Acids , Coal Ash , Compressive Strength
7.
Polymers (Basel) ; 14(3)2022 Feb 01.
Article in English | MEDLINE | ID: mdl-35160580

ABSTRACT

In this study, sorptivity, setting time, resistance to sulfuric acid, and compressive strength of mortars that use alkali-activated GGBS and fly ash as binders, were evaluated experimentally. The activation of binders, was achieved at room temperature of 22 ± 2 °C using combinations of sodium silicates (Na2SiO3) and sodium hydroxide (NaOH) solutions in ratios of 1.5, 2.0, and 2.5. The parameters considered in terms of their effects on fresh and hardened properties include: NaOH molarity, activator ratio Na2SiO3/NaOH, mortar sample age, and relative amount of GGBS/fly ash in binder combination. Sorptivity, change in mass, and compressive strength were determined for mortar samples that were submerged in 10% sulfuric acid solution for 7 days, 28 days, and 90 days. The binder for mortar samples tested at each of the specified ages consisted of 100% GGBS (G100), 75%GGBS+25% fly ash (G75F25), or 50% GGBS + 50% fly ash (G50F50). The binder was activated using Na2SiO3 solution, combined with 10 M, 12 M, 14 M, or 16 M NaOH solution. It was found that sorptivity decreases with increase in curing age, for all activator ratios, concentrations, and relative amounts of GGBS/fly ash. Binder consisting of 75%GGBS + 25% fly ash with NaOH concentration of 12 M had the lowest sorptivity. Exposure of alkali-activated GGBS/fly ash mortar samples to sulfate attack did not cause loss in mass nor visible signs of damage/deterioration. All binder combinations experienced increase in compressive strength after curing in 10%sufluric acid solution, with the optimum G75F25 mix achieving a 28-day strength of 80.53 MPa when NaOH molarity is 10 M, which increased to 91.06 MPa after 90 days. Variation in concentration of NaOH didn't cause significant change in the magnitudes of 28-day or 90-day compressive strengths of G50F50. However, despite slow dissolution of fly ash and immersion in 10% sulfuric acid solution, G50F50 developed 28-day compressive strength of 56.23 MPa and 90-day compressive of 86.73 MPa, which qualifies G50F50 as high strength mortar for practical purposes.

8.
Iran J Microbiol ; 14(6): 850-862, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36721450

ABSTRACT

Background and Objectives: Dental caries is a breakdown of the teeth enamel due to harmful bacteria, lack of oral hygiene, and sugar consumption. The acid-producing bacterium Streptococcus mutans is the leading cause of dental caries. Dextranase is an enzyme that can degrade dextran to low molecular weight fractions, which have many therapeutic and industrial applications. The purpose of the present study was to isolate a novel dextranase-producing bacteria from a source (molasses). The cell-free extracts containing dextranases were tested as antibiofilm agents. Materials and Methods: Dextranase-producing bacteria were identified using phenotypic and genotypic methods such as 16S rRNA gene sequencing and enzymatic characterization. Results: The highest six dextranase-producing bacterial isolates were Bacillus species. The best conditions for dextranase productivity were obtained after 72 hours of culture time at pH 7. The addition of glucose to the medium enhanced the production of the enzymes. The cell-free extract of the six most active isolates showed remarkable activity against biofilm formation by Streptococcus mutans ATCC 25175. The highest inhibition activities reached 60% and 80% for Bacillus velezensis and Pseudomonas stutzeri, respectively. Conclusion: Therefore, our study added to the current dextranase-producing bacteria with potential as a source of dextranases.

9.
Microb Drug Resist ; 27(10): 1420-1432, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34042527

ABSTRACT

The biological fitness cost of antibiotic resistance is a key parameter in determining the rate of appearance and spread of antibiotic-resistant bacteria in Egypt. Our study aimed to investigate the prevalence of antibiotic resistance among Escherichia coli clinical isolates from Greater Cairo area hospitals. A total of 537 clinical isolates were recovered from samples of urine, diarrheal specimen, pus, wound culture, gastric wound, blood, drain culture, sputum, high vaginal swab, abscess, amniotic fluid, ventilator, burn swab, splenic drain culture, and unknown site of infection during different seasons. All isolates were subjected to phenotypic and genotypic susceptibility testing for colistin, nitrofurantoin, fosfomycin, and trimethoprim, quinolones, and ß-lactam resistance. Our results revealed that 42.7% of the isolates harbored at least one resistance encoding gene, 10% harboring 2, 0.6% harboring 3, and 0.85% harboring 4 resistance-encoding genes. PCR reported the prevalence of resistance genes as follows: bla-SHV 13.4%, mcr-1 0.6%, qnr-A 23.8%, fos-A 1.06%, nfs-A 3.6%, and dfr-A 25.5%. We reported that three isolates carried the mcr-1 gene encoding colistin resistance from three different hospitals. Upon performing sequencing and phylogenetic analysis on the three positive mcr-1 isolates (MT890587, MT890588, and MT890589), the three isolates showed 100% identity with themselves, with some strains from Egypt and Japan, and 99.9% identity with an isolate from China.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Escherichia coli/drug effects , Escherichia coli/genetics , Genes, Bacterial/genetics , Egypt , Escherichia coli/isolation & purification , Genotype , Hospitals , Humans , Microbial Sensitivity Tests , Phenotype , Plasmids
10.
Int J Ophthalmol ; 14(5): 666-675, 2021.
Article in English | MEDLINE | ID: mdl-34012880

ABSTRACT

AIM: To detect the quantitative expression levels of the pro-inflammatory interleukin-8 (IL8), antimicrobial peptides human beta defense-2 (HBD2), and human beta defense-3 (HBD3) genes in bacterial conjunctivitis. METHODS: The human conjunctival epithelial cells were obtained using the impression cytology technique from healthy controls and patients. The genes expression levels were determined utilizing a reverse transcription quantitative polymerase chain reaction (RT-qPCR). The contribution of causative agent type, the number of isolates and severity of clinical features, in the increase of genes expression was also determined. RESULTS: The RT-qPCR showed that IL8, HBD2, and HBD3 expression increased in bacterial conjunctivitis as compared to healthy control (P<0.001). In gram-negative bacterial conjunctivitis, HBD2 was highly up-regulated (P<0.001) compared to other types of bacterial conjunctivitis. In mixed bacterial conjunctivitis, a direct correlation between HBD2 up-regulation and HBD3 up-regulation was observed (P<0.05). The severity of clinical features was related to the up-regulation of IL8 and HBD2 (P<0.05). CONCLUSION: IL8, HBD2, and HBD3 are immune-effectors in infectious conjunctivitis. HBD2 is active during different bacterial conjunctivitis but is more released with gram-negative bacteria compared to gram-positive bacteria. HBD3 is an obvious defender in different bacterial conjunctivitis.

11.
J Cosmet Dermatol ; 20(10): 3257-3263, 2021 Oct.
Article in English | MEDLINE | ID: mdl-33880860

ABSTRACT

BACKGROUND: Chronic venous leg ulcer reduces the patients' activities and their overall quality of life. Platelet-rich plasma (PRP) was previously investigated as promising less invasive management for leg ulcers. THIS STUDY AIMS: To re-assess the efficacy and safety of PRP in the management of chronic leg ulcers due to venous factors. PATIENTS/METHODS: RCT enrolled 80 patients who clinically presented with chronic venous leg ulcers. Forty patients were allocated randomly for the treatment with autologous platelet-rich plasma (PRP). Intradermal and subdermal injection of PRP by 27guage syringe weekly, in all edges and in the granular floor of the ulcer for 4-6 sessions. Another 40 patients managed by conventional treatment by compression and dressing for the same period were allocated as Group B. Objective assessment achieved by the percentage of reduction of the size of the ulcer area, rate of healing, incidence of recurrence, and if side effects have been reported. RESULTS: PRP therapy showed better results and high p value significance when compared to conventional therapy. CONCLUSION: This study shows that PRP is effective and significant in promoting the wound healing process in chronic leg venous ulcers. PRP is simple, safe, and has a short learning curve technique.


Subject(s)
Leg Ulcer , Platelet-Rich Plasma , Varicose Ulcer , Bandages , Humans , Leg Ulcer/etiology , Leg Ulcer/therapy , Quality of Life , Varicose Ulcer/therapy
12.
Article in English | MEDLINE | ID: mdl-32552645

ABSTRACT

BACKGROUND: Spontaneous bacterial peritonitis is a common bacterial infection of ascitic fluid, mainly in ascites due to liver cirrhosis. Mannose-binding lectin (MBL) can activate phagocytosis and the complement system. Spontaneous bacterial peritonitis was detected to be higher in MBL deficiency. This study aimed to assess ascitic fluid MBL in liver cirrhosis and spontaneous bacterial peritonitis. METHODS: Ninety patients with cirrhotic ascites were included. Forty five of them had SBP. Child- Pugh score, Model for End Stage Liver Disease (MELD) and its update (uMELD) scores were used to assess the severity of liver cirrhosis. Ascitic fluid samples were obtained for differentiation of leucocytic count, estimation of albumin, protein, glucose, and serum-ascitic albumin gradient. Ascitic fluid levels of MBL were measured for all patients. SBP was documented if polymorphonuclear leucocytic count ≥250/mm in ascitic fluid. RESULTS: Ascitic fluid MBL level was significantly lower in patients with SBP. MBL had a significant negative correlation with ascitic total leukocytic count (TLC), also with serum creatinine, bilirubin, PT, INR and MELD score among SBP patients. However, it had a significant positive correlation with ascitic protein and with platelets. According to multivariate analysis, fever, TLC, platelets, creatinine, MBL, glucose and polymorphs were independent predictors for SBP development. CONCLUSION: Ascitic fluid MBL could be a good predictive and prognostic marker in patients with cirrhosis and spontaneous bacterial peritonitis.


Subject(s)
Ascitic Fluid/chemistry , Liver Cirrhosis/pathology , Mannose-Binding Lectin/analysis , Peritonitis/pathology , Adult , Ascitic Fluid/cytology , Female , Humans , Male , Middle Aged , Peritonitis/microbiology
13.
Infect Disord Drug Targets ; 21(3): 358-362, 2021.
Article in English | MEDLINE | ID: mdl-32433010

ABSTRACT

The 2019 coronavirus pandemic (COVID-19) continues to expand worldwide. Although the number of cases and the death rate among children and adolescents are reported to be low compared to adults, limited data have been reported. We urgently need to find the treatment and vaccine to stop the epidemic. Vaccine development is in progress, but any approved and effective vaccine for COVID-19 will take at least 12 to 18 months. The World Health Organization (WHO), the Center for Disease Control and Prevention (CDC), and the Food and Agriculture Organization (FAO) have issued instructions and strategies for controlling COVID-19 outbreak to the general public, physicians, travelers and injured patients to follow so that the transmission to a healthy population can be prevented. In this review, we summarize demographic data, clinical characteristics, complications and outcomes and finally prevention and control strategies for this serious pandemic.


Subject(s)
COVID-19 , Pandemics , COVID-19/prevention & control , Humans
14.
Eur J Clin Microbiol Infect Dis ; 40(1): 49-58, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32729058

ABSTRACT

There are increasing demands for biogenic synthesis of silver nanoparticles (AgNPs) due to their unique properties and their numerous applications especially in biomedical field. Direct sunlight irradiation on aqueous garlic extract (AGE) represent fast, applicable, non-toxic, cheap, and ecofriendly method for (AgNPs) synthesis, with potentials to compete multi-drug-resistant (MDR) and biofilm-forming pathogens causing otitis media (OM). The aim of this study was to establish an eco-friendly method for synthesis of AgNPs, using aqueous garlic extract and sunlight, and moreover, detect its potential to inhibit MDR OM microbes. Obtained AgNPs were characterized by UV-visible spectral analysis, TEM, DLS, XRD, and FTIR. The effect of biosynthesized AgNPs on microbial growth, as well as biofilm productivity, was assessed against five resistant OM-causing strains, namely Bacillus cereus, Pseudomonas aeruginosa, Penicillium chrysogenum, Aspergillus niger, and Aspergillus flavus. Kirby-Bauer disc diffusion method was used to assess the inhibitory effect of 100, 50, 25, 12.5, and 6.25 µg/ml of AgNPs compared with tetracycline or nystatin and AGE. Additionally, the effect of 25 µg/ml of AgNPs on biofilm productivity of such strains was qualitatively assessed using Congo red agar (CRA) and TEM used to capture the changes inside the selected strains. The obtained AgNPs showed a highly significant (p value < 0.001) antimicrobial and antibiofilm activities against tested strains. TEM images of Pseudomonas aeruginosa and Aspergillus flavus treated with 25 µg/ml AgNPs showed shrinkage in the cytoplasmic materials and rupture of cell walls.


Subject(s)
Anti-Bacterial Agents/pharmacology , Otitis Media/drug therapy , Silver/pharmacology , Anti-Bacterial Agents/administration & dosage , Anti-Bacterial Agents/chemistry , Aspergillus flavus/drug effects , Biofilms/drug effects , Humans , Metal Nanoparticles , Microbial Sensitivity Tests , Otitis Media/microbiology , Pseudomonas aeruginosa/drug effects , Silver/administration & dosage , Silver/chemistry
15.
Arch Virol ; 165(12): 3087, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32915314

ABSTRACT

Unfortunately, the affiliation of author "Rania Abdelmonem Khattab" was published incorrectly in the original publication. The correct version of affiliation is updated here.

16.
Arch Virol ; 165(10): 2361-2365, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32743697

ABSTRACT

In this study, we investigated the seroprevalence of anti-hepatitis D virus (HDV) antibodies in hepatitis B surface antigen (HBsAg)-positive children after 25 years of obligatory vaccination of infants against hepatitis B virus. This cross-sectional study included 120 treatment-naïve HBsAg-positive children, with a male-to-female ratio of 1.8:1 and a mean age of 7.8 ± 3.8 years (range, 1-17 years). Mothers were positive for HBsAg in 96.6% of the cases. HBeAg-positive chronic infection was observed in 60% of the cases, HBeAg-positive chronic hepatitis in 12.5%, and HBeAg-negative chronic infection in 26.7%. Anti-HDV antibodies were not detected in any of the cases. Thus, there is a lack of anti-HDV antibodies in HBsAg-positive children, despite the current burden in adults.


Subject(s)
Hepatitis Antibodies/blood , Hepatitis B Surface Antigens/blood , Hepatitis B Vaccines/administration & dosage , Hepatitis B virus/immunology , Hepatitis B/epidemiology , Hepatitis D, Chronic/epidemiology , Hepatitis Delta Virus/immunology , Adolescent , Child , Child, Preschool , Coinfection , Cross-Sectional Studies , Egypt/epidemiology , Female , Hepatitis B/immunology , Hepatitis B/prevention & control , Hepatitis B/virology , Hepatitis B virus/drug effects , Hepatitis B virus/pathogenicity , Hepatitis D, Chronic/blood , Hepatitis D, Chronic/immunology , Hepatitis D, Chronic/virology , Hepatitis Delta Virus/pathogenicity , Humans , Infant , Male , Seroepidemiologic Studies
17.
Anaerobe ; 63: 102206, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32339663

ABSTRACT

Clostridium difficile infection (CDI) is a common cause of morbidity and mortality in hospitalized patients worldwide. The major problem facing current treatment is multiple recurrences, prompting the need for alternative therapies. In this study we isolated bacterial species, from Egyptian individuals' stool, with antimicrobial activity against clinical isolates of C. difficile and tried to examine the nature of the produced antimicrobials. In vitro antibacterial activity against C. difficile was initially screened in 123 fecal samples cultures using an agar overlay method. The isolates with antimicrobial activity against C. difficile in addition to Clostridium isolates were identified using partial 16S rDNA gene sequencing analysis. The isolates acting against C. difficile belonged to Lactobacillus, Enterococcus and Clostridium genera. The concentrated cell-free supernatants (CFSs) from these bacterial isolates were examined for antimicrobial activity against C. difficile growth by broth dilution method. 10 x concentrated CFSs of five isolates showed inhibition for C. difficile growth which was significantly different (p < 0.001) from control. Lactobacillus agilis T99A and Clostridium butyricum T58A isolates were selected for further evaluation of the produced antimicrobials. The antimicrobial activity of 10x CFSs of the two isolates was stable after enzymatic treatment with proteinase K or heating treatments up to 90 °C or neutralizing pH. The spectrum of activity of the two isolates was evaluated using different gram-positive and gram-negative bacterial species and did not show antimicrobial activity against these species. Our results showed two unconventional bacterial isolates: L. agilis T99A and C. butyricum T58A producing extracellular thermo stable antimicrobial agents against C. difficile clinical isolates.


Subject(s)
Anti-Bacterial Agents , Bacteria, Anaerobic/metabolism , Clostridioides difficile , Clostridium Infections , Anti-Bacterial Agents/metabolism , Anti-Bacterial Agents/pharmacology , Clostridioides difficile/drug effects , Clostridioides difficile/growth & development , Clostridioides difficile/isolation & purification , Clostridium Infections/drug therapy , Clostridium Infections/microbiology , Clostridium butyricum/metabolism , Feces/microbiology , Humans , Lactobacillus/metabolism , Microbial Interactions
18.
Polymers (Basel) ; 12(3)2020 Mar 19.
Article in English | MEDLINE | ID: mdl-32204432

ABSTRACT

Reinforced concrete flat slabs or flat plates continue to be among the most popular floor systems due to speed of construction and inherent flexibility it offers in relation to locations of partitions. However, flat slab/plate floor systems that are deficient in two-way shear strength are susceptible to brittle failure at a slab-column junction that may propagate and lead to progressive collapse of a larger segment of the structural system. Deficiency in two-way shear strength may be due to design/construction errors, material under-strength, or overload. Fiber reinforced polymer (FRP) composite laminates in the form of sheets and/or strips are used in structurally deficient flat slab systems to enhance the two-way shear capacity, flexural strength, stiffness, and ductility. Glass FRP (GFRP) has been used successfully but carbon FRP (CFRP) sheets/strips/laminates are more commonly used as a practical alternative to other expensive and/or challenging methods such column enlargement. This article reviews the literature on the methodology and effectiveness of utilizing FRP sheets/strips and laminates at the column/slab intersection to enhance punching shear strength of flat slabs.

19.
Infect Disord Drug Targets ; 20(6): 840-847, 2020.
Article in English | MEDLINE | ID: mdl-31721718

ABSTRACT

BACKGROUND & AIMS: Hepatitis B is a potentially life-threatening liver infection and it is a major global health problem. Over the past decade, numerous studies have reported that patients with CLD, especially HCV-positive and HBV-positive patients, have decreased 25(OH) D levels. The current study was designed to assess the serum levels of vitamin D [25(OH) D3] in chronic hepatitis B patients, before and during treatment with antiviral therapy. METHODS: It was a prospective study in which 80 subjects were enrolled between December 2017 and June 2018. A total of 50 treatment-naïve chronic HBV patients and 30 healthy subjects were recruited. The studied cases received treatment in the form of Lamivudine 100 mg tablet, once daily. Full routine laboratory investigations, HBV DNA measurement by real-time PCR were conducted once before initiation of antiviral treatment and again at least 6 months later. Serum vitamin D level [25(OH)D3 was assessed twice, once before initiation of antiviral treatment and again at least 6 months later. This was done for all the patients enrolled in the study. RESULTS: The studied cases showed a significantly low mean serum Vitamin D level when assessed before treatment (21.6 ± 5.8 ng/ml), compared to the level after 6 ms of treatment (31.1 ± 7.3 ng/ml) which was comparable to that of the control group (33.4 ± 5 ng/ml). CONCLUSION: The present study highlights the impact of antiviral therapy on vitamin D deficiency in CHB patients, where effective therapy improves vitamin D levels. Meanwhile, it is recommended to study the impact of vitamin D replacement and correction on the disease progression or regression.


Subject(s)
Hepatitis B, Chronic , Antiviral Agents/therapeutic use , Hepatitis B virus , Hepatitis B, Chronic/drug therapy , Humans , Lamivudine/therapeutic use , Prospective Studies , Vitamin D
20.
Int J Infect Dis ; 92: 13-18, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31863879

ABSTRACT

OBJECTIVES: Egypt ranks first regarding the prevalence of hepatitis C virus (HCV) infection. Many patients have concomitant diseases like kidney disorders requiring hemodialysis, a procedure carrying the hazard of transmitting other hepatitis viruses. The purpose of this study was to investigate for occult hepatitis B virus (HBV), SEN virus (SENV), and torque teno virus (TTV) among chronic HCV patients on maintenance hemodialysis to identify their impacts. METHODS: A total of 325 hemodialysis patients were enrolled and divided into two groups based on HCV RNA testing results. Blood samples were collected before hemodialysis. Sera were tested for hepatitis B core antibodies (anti-HBc) and hepatitis B surface antibodies (anti-HBs) using ELISA. HBV, SENV, and TTV DNA were detected by PCR. The serum alanine aminotransferase (ALT) level was measured. RESULTS: Anti-HBc and HBV DNA were detected in 73.1% and 50.8% of group 1 versus 36.4% and 22.6% of group 2. The serum ALT level was higher in group 1 than group 2. SENV was detected in 11.5% of group 1 versus 8.2% of group 2. TTV was detected in 29% of group 1 versus 27% of group 2. CONCLUSIONS: There is an increased prevalence of occult HBV in our locality among chronic HCV patients undergoing hemodialysis. The existence of SENV and TTV viremia has no clinical impact.


Subject(s)
Hepatitis B virus , Hepatitis C, Chronic/virology , Renal Dialysis , Torque teno virus , Adult , Alanine Transaminase/blood , Egypt , Enzyme-Linked Immunosorbent Assay , Female , Hepacivirus , Hepatitis B Antibodies/blood , Hepatitis B virus/isolation & purification , Hepatitis C, Chronic/complications , Humans , Male , Middle Aged , Polymerase Chain Reaction , Prevalence , Torque teno virus/isolation & purification
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