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1.
Anaerobe ; 15(4): 145-54, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19655426

ABSTRACT

The impact of continuous sub-therapeutic chlortetracycline on community structure, composition and abundance of tetracycline resistance genes in the rat fecal community was investigated. Rats were fed a standard diet containing chlortetracycline at 15 microg g(-1) diet for 28 days, followed by 30 microg g(-1) diet to completion of the study on day-56. These levels are similar to those administered to swine during the grow-out phase. Sub-therapeutic chlortetracycline affected the fecal community as determined through change in the cultivable anaerobic community and through molecular-based analyses including denaturing gradient gel electrophoresis profiles of the variable 2-3 region community 16S rRNA genes over time and through comparative sequence analysis of 16S rRNA gene community libraries. Significant decreases in fecal phylotype diversity occurred in response to sub-therapeutic chlortetracycline, although total bacterial output remained constant over the entire feeding trial. Chlortetracycline at 15 microg g(-1) diet resulted in significant change in community composition, but only modest change to the fecal community structure in terms of the distribution of individual phylotypes among the major fecal lineages. Chlortetracycline at 30 microg g(-1) diet significantly altered the distribution of phylotypes among the major fecal lineages shifting the overall community such that Gram-negative phylotypes aligning within the phylum Bacteroidetes became the dominant lineage (>60% of total community). While chlortetracycline impacted both fecal community structure and composition, there was no significant effect on the abundance of community tetracycline resistance genes [tet(Q), tet(W), tet(O)] or on the emergence of a new putative tetracycline resistance gene identified within the fecal community. While sub-therapeutic chlortetracycline provides sufficient selective pressure to significantly alter the fecal community, the primary outcome appears to be the development of a community which may have a higher inherent tolerance to sub-therapeutic levels of chlortetracycline rather than an overgrowth of the tetracycline resistant bacteria already present within the community.


Subject(s)
Animal Feed , Bacteria/drug effects , Chlortetracycline/administration & dosage , Ecosystem , Feces/microbiology , Tetracycline Resistance/genetics , Animals , Anti-Bacterial Agents/pharmacology , Bacteria/classification , Bacteria/genetics , Bacteria/growth & development , Bacterial Proteins/genetics , Chlortetracycline/pharmacology , Colony Count, Microbial , Culture Media , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction/methods , RNA, Ribosomal, 16S/genetics , Rats , Ribosomes/metabolism , Sequence Analysis, DNA
2.
Can J Microbiol ; 52(10): 924-33, 2006 Oct.
Article in English | MEDLINE | ID: mdl-17110960

ABSTRACT

The effect of fructans on the cultivable faecal community of Bio Breeding rats fed diets containing 5% (m/v) food-grade fructooligosaccharide (FOS) was investigated. Culturing of faecal material using chicory inulin as the sole carbohydrate source revealed the presence of a greater diversity of inulin-utilizing bacterial species in FOS-fed rats as compared with the control rats, although both contained species which effectively utilized inulin. The majority of cultivable inulin-utilizing species fell within the Clostridium coccoides group and Clostridium leptum subgroup, some of which were related to previously cultured butyrate-producing bacteria from the intestines of various animals. The impact of FOS on the growth of the indigenous bifidobacteria community and three inulin-utilizing isolates was assessed using real-time polymerase chain reaction. While dietary FOS was found to stimulate the growth of all three inulin-utilizing isolates, no growth stimulation of the indigenous bifidobacteria community occurred over the duration of the feeding trial.


Subject(s)
Bifidobacterium/growth & development , Dietary Carbohydrates/administration & dosage , Feces/microbiology , Intestines/microbiology , Oligosaccharides/administration & dosage , Oligosaccharides/metabolism , Animals , Bifidobacterium/isolation & purification , Cichorium intybus/metabolism , Colony Count, Microbial , Culture Media/chemistry , Diet , Digestion , Gram-Positive Bacteria/classification , Gram-Positive Bacteria/growth & development , Gram-Positive Bacteria/isolation & purification , Inulin/metabolism , Random Allocation , Rats , Rats, Inbred BB , Reverse Transcriptase Polymerase Chain Reaction
3.
Can J Microbiol ; 51(3): 197-208, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15920617

ABSTRACT

Biofilm formation may be important in the colonization of the food-processing environment by the food-borne pathogen Listeria monocytogenes. Listeria monocytogenes 568 formed adherent multicellular layers on a variety of test surfaces following growth at 37 degrees C with multiple transfers of the test surface into fresh medium. Microscopic examination of these adherent layers suggest that the cells were surrounded by extracellular material. The presence of a carbohydrate containing extracellular polymeric matrix was confirmed by labelling hydrated adherent layers with fluorescein-conjugated concanavalin A, indicating that these adherent layers are biofilms. To gain insight into the physiological state of cells in these biofilms, the proteomes from biofilm- and planktonic-grown cells from the same cultures were compared using 2-dimensional polyacrylamide gel electrophoresis. Nineteen proteins, which exhibited higher levels of expression in biofilm-grown cells, were successfully identified from the 2-D gels using a combination of MALDI-TOF and MS/MS. Proteins that were found to be more highly expressed in biofilm-grown cells were involved in stress response, envelope and protein synthesis, biosynthesis, energy generation, and regulatory functions. In biofilm-grown cells, many proteins in the pH range 4-6 ran as multiple spots arranged horizontally across the 2-D gels.


Subject(s)
Bacterial Proteins/metabolism , Biofilms/growth & development , Gene Expression Regulation, Bacterial , Listeria monocytogenes/growth & development , Listeria monocytogenes/ultrastructure , Proteome , Bacterial Adhesion , Culture Media , Electrophoresis, Gel, Two-Dimensional , Listeria monocytogenes/metabolism , Mass Spectrometry , Microscopy, Electron, Scanning , Microscopy, Fluorescence , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
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