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Nat Genet ; 49(9): 1326-1335, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28759004

ABSTRACT

Previous genome-wide association studies have identified a melanoma-associated locus at 1q42.1 that encompasses a ∼100-kb region spanning the PARP1 gene. Expression quantitative trait locus (eQTL) analysis in multiple cell types of the melanocytic lineage consistently demonstrated that the 1q42.1 melanoma risk allele (rs3219090[G]) is correlated with higher PARP1 levels. In silico fine-mapping and functional validation identified a common intronic indel, rs144361550 (-/GGGCCC; r2 = 0.947 with rs3219090), as displaying allele-specific transcriptional activity. A proteomic screen identified RECQL as binding to rs144361550 in an allele-preferential manner. In human primary melanocytes, PARP1 promoted cell proliferation and rescued BRAFV600E-induced senescence phenotypes in a PARylation-independent manner. PARP1 also transformed TERT-immortalized melanocytes expressing BRAFV600E. PARP1-mediated senescence rescue was accompanied by transcriptional activation of the melanocyte-lineage survival oncogene MITF, highlighting a new role for PARP1 in melanomagenesis.


Subject(s)
Cell Proliferation/genetics , Introns/genetics , Melanocytes/metabolism , Microphthalmia-Associated Transcription Factor/genetics , Poly (ADP-Ribose) Polymerase-1/genetics , Polymorphism, Single Nucleotide , Base Sequence , Cell Line, Tumor , Cell Transformation, Neoplastic/genetics , Cells, Cultured , Cellular Senescence/genetics , Gene Expression Profiling/methods , Gene Expression Regulation, Neoplastic , Humans , INDEL Mutation , Immunoblotting , Melanoma/genetics , Melanoma/metabolism , Melanoma/pathology , Microphthalmia-Associated Transcription Factor/metabolism , Microscopy, Confocal , Poly (ADP-Ribose) Polymerase-1/metabolism , Proto-Oncogene Proteins B-raf/genetics , Proto-Oncogene Proteins B-raf/metabolism , Risk Factors , Telomerase/genetics , Telomerase/metabolism
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