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1.
Environ Microbiome ; 18(1): 82, 2023 Nov 21.
Article in English | MEDLINE | ID: mdl-37990336

ABSTRACT

BACKGROUND: Cave biotopes are characterized by stable low temperatures, high humidity, and scarcity of organic substrates. Despite the harsh oligotrophic conditions, they are often inhabited by rich microbial communities. Abundant fouling with a wide range of morphology and coloration of colonies covers the walls of the Shulgan-Tash cave in the Southern Urals. This cave is also famous for the unique Paleolithic painting discovered in the middle of the last century. We aimed to investigate the diversity, distribution, and potential impact of these biofilms on the cave's Paleolithic paintings, while exploring how environmental factors influence the microbial communities within the cave. RESULTS: The cave's biofilm morphotypes were categorized into three types based on the ultrastructural similarities. Molecular taxonomic analysis identified two main clusters of microbial communities, with Actinobacteria dominating in most of them and a unique "CaveCurd" community with Gammaproteobacteria prevalent in the deepest cave sections. The species composition of these biofilms reflects changes in environmental conditions, such as substrate composition, temperature, humidity, ventilation, and CO2 content. Additionally, it was observed that cave biofilms contribute to biocorrosion on cave wall surfaces. CONCLUSIONS: The Shulgan-Tash cave presents an intriguing example of a stable extreme ecosystem with diverse microbiota. However, the intense dissolution and deposition of carbonates caused by Actinobacteria pose a potential threat to the preservation of the cave's ancient rock paintings.

2.
Sci Rep ; 9(1): 17241, 2019 11 21.
Article in English | MEDLINE | ID: mdl-31754160

ABSTRACT

The formation of snow-dirt sludge (SDS) via the mixing of snow and surface-deposited sediment by vehicles and pedestrians is one of the least studied sedimentation processes in urban areas. The aim of this study was to analyse the material, mineral, particle size, and chemical compositions of the SDS solid phase. The study was conducted using Ekaterinburg, Russia, as an example city with an intense anthropogenic impact and a long cold snowy period. The average content of the SDS solid phase was approximately 35 g L-1 of meltwater on heavy traffic roads, of which the dust fraction (<0.1 mm) accounted for 23 g L-1. On driveways and lawns, the contents of the SDS solid phase were 12 and 6.6 g L-1, respectively. The mineral composition of the SDS solid phase was generally similar to the geology of the surrounding area, which is composed of a mosaicked combination of felsic and mafic complexes. The presence of building material fragments and other anthropogenic particles confirms the significant anthropogenic impact. The chemical composition contained major and minor elements specific to the minerals and materials that constitute the SDS solid phase. There was significant variability in the concentrations of Pb, Cu, and Zn in the granulometric fractions, indicating pollution. Intensive melting of SDS with a high particulate matter (PM) content is an important factor influencing the environmental quality of the urban environment.

3.
Int J Mol Sci ; 20(10)2019 May 15.
Article in English | MEDLINE | ID: mdl-31096563

ABSTRACT

High immunogenicity and systemic toxicity are the main obstacles limiting the clinical use of the therapeutic agents based on Pseudomonas aeruginosa exotoxin A. In this work, we studied the immunogenicity, general toxicity and antitumor effect of the targeted toxin DARPin-LoPE composed of HER2-specific DARPin and a low immunogenic exotoxin A fragment lacking immunodominant human B lymphocyte epitopes. The targeted toxin has been shown to effectively inhibit the growth of HER2-positive human ovarian carcinoma xenografts, while exhibiting low non-specific toxicity and side effects, such as vascular leak syndrome and liver tissue degradation, as well as low immunogenicity, as was shown by specific antibody titer. This represents prospects for its use as an agent for targeted therapy of HER2-positive tumors.


Subject(s)
Epitopes, B-Lymphocyte/immunology , Heterografts , Immunotoxins/immunology , Immunotoxins/pharmacology , Muscle Proteins/immunology , Nuclear Proteins/immunology , Ovarian Neoplasms/drug therapy , Receptor, ErbB-2/immunology , ADP Ribose Transferases/immunology , ADP Ribose Transferases/pharmacology , Amino Acid Sequence , Animals , Antineoplastic Agents/immunology , Antineoplastic Agents/pharmacology , Bacterial Toxins/immunology , Bacterial Toxins/pharmacology , Biomarkers, Tumor , Carcinoma/drug therapy , Cell Line, Tumor , Cell Survival/drug effects , Disease Models, Animal , Epitopes, B-Lymphocyte/genetics , Exotoxins/immunology , Exotoxins/pharmacology , Female , Humans , Inhibitory Concentration 50 , Liver/pathology , Mice , Mice, Inbred BALB C , Mice, Nude , Molecular Targeted Therapy , Muscle Proteins/genetics , Nuclear Proteins/genetics , Ovarian Neoplasms/pathology , Recombinant Fusion Proteins/immunology , Recombinant Fusion Proteins/therapeutic use , Spleen/pathology , Virulence Factors/immunology , Virulence Factors/pharmacology , Xenograft Model Antitumor Assays , Pseudomonas aeruginosa Exotoxin A
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