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1.
Gynecol Minim Invasive Ther ; 10(1): 50-52, 2021.
Article in English | MEDLINE | ID: mdl-33747775

ABSTRACT

Ovarian leiomyomas are very rare. We report the case of a primary ovarian leiomyoma accompanied by multiple uterine leiomyomas. A 50-year-old woman was referred to our department for heavy menstruation, and a hot spot in the uterine lumen was observed on positron emission tomography-computed tomography (PET-CT). Cervical and endometrial cytology and tumor marker tests were negative. Pelvic magnetic resonance imaging revealed an endometrial polyp and submucosal leiomyoma in the uterine lumen and a 5-cm right ovarian tumor. Laparoscopic total hysterectomy, right salpingo-oophorectomy, and left salpingectomy were performed for radical treatment. Histopathology showed that ovarian tumors contained interlacing bundles of fusiform cells encircled by normal ovarian tissue. Immunohistochemical staining showed strong and diffuse positive staining for α-smooth muscle actin. We diagnosed the tumor as a primary ovarian leiomyoma because the leiomyoma was localized in the ovary and was larger than the size of uterine leiomyomas. No metastatic lesion was found on PET-CT. There was no tumor recurrence at the 6-month follow-up.

2.
Eval Rev ; 39(1): 82-101, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25601967

ABSTRACT

BACKGROUND: During the Meiji era, at the end of the 19th century, Japan introduced western systems into many fields, economically developing later than other industrially developed countries. Japan introduced a higher education system modeled on the German system, focusing not on education but on research. The historical background has shaped contemporary Japanese academia differently from that of the United States and the European Union. In addition, because of geographical and linguistic barriers in Asia, intercommunication with researchers in other developed countries has been much less than that between the United States and the European Union, leaving Japanese academia relatively isolated. METHOD: We survey the characteristics of the Japanese academic system in higher education, using the latest published data. RESULT: This article indicates a concentration of research at former imperial universities and a rigidity of movement among universities both internationally and domestically. Furthermore, small differences in salary levels have provided little incentive to perform research. However, while most universities in Japan have not introduced evaluation systems for promotion and salary that are heavily dependent on journal rankings, as in the European Union and United States, Japanese academic performance has not declined. CONCLUSION: This article suggests that in Japan, salary incentives, the impact factor, and so on have had little influence on academic performance. Even though cultural and historical differences between countries affect academic behaviors, we hope that this article might trigger consideration of other possible evaluation schemes for the future.


Subject(s)
Employment/organization & administration , Research/economics , Universities/organization & administration , Work Performance , Cost-Benefit Analysis , Cultural Characteristics , European Union , Faculty, Medical/organization & administration , Humans , Japan , Marketing , Motivation , Research/education , Surveys and Questionnaires , United States
3.
PLoS One ; 7(10): e46157, 2012.
Article in English | MEDLINE | ID: mdl-23071541

ABSTRACT

We are interested in identifying and characterizing various projection neurons that constitute the neocortical circuit. For this purpose, we developed a novel lentiviral vector that carries the tetracycline transactivator (tTA) and the transgene under the TET Responsive Element promoter (TRE) on a single backbone. By pseudotyping such a vector with modified rabies G-protein, we were able to express palmitoylated-GFP (palGFP) or turboFP635 (RFP) in corticothalamic, corticocortical, and corticopontine neurons of mice. The high-level expression of the transgene achieved by the TET-Off system enabled us to observe characteristic elaboration of neuronal processes for each cell type. At higher magnification, we were able to observe fine structures such as boutons and spines as well. We also injected our retrograde TET-Off vector to the marmoset cortex and proved that it can be used to label the long-distance cortical connectivity of millimeter scale. In conclusion, our novel retrograde tracer provides an attractive option to investigate the morphologies of identified cortical projection neurons of various species.


Subject(s)
Cerebral Cortex/cytology , Genetic Vectors , Lentivirus/genetics , Neurons/cytology , Repressor Proteins/genetics , Animals , Fluorescent Dyes , Green Fluorescent Proteins/genetics , Mice , Promoter Regions, Genetic , Transgenes
4.
Cytometry A ; 79(8): 653-60, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21710641

ABSTRACT

The initiation of translation in hepatitis C virus (HCV) occurs at the internal ribosome entry site (IRES) located at the 5'-end of its genomic RNA. To study the function of HCV IRES, we constructed a reporter plasmid that generates a bicistronic mRNA encoding two fluorescent proteins: cap-dependent DsRed2 and IRES-dependent Azami Green (AG). We introduced the plasmid into Huh7.5.1 and HEK293 cells and measured the relative IRES activity from the ratio of AG's signal to DsRed2's in individual cells using flow cytometry. To compare our method and a conventional biochemical method, we constructed a structurally similar reporter in which Renilla and Firefly luciferases replace DsRed2 and AG, respectively. With these systems, we found that the IRES A164G substitution decreased its activity, that interferon alpha affected the IRES activity in a cell type-specific manner, and that a synthetic micro-RNA targeting IRES was able to suppress the gene expression. In conclusion, the two methods were comparable in sensitivity in the studies of IRES mutations and host cell types. We discussed the significance of our findings and potential advantage of the cytometric assay: application to the molecular study of the HCV translation and to screening anti-IRES drugs.


Subject(s)
Flow Cytometry/methods , Hepacivirus/metabolism , Luciferases, Firefly/metabolism , Luciferases, Renilla/metabolism , Protein Biosynthesis , Ribosomes/metabolism , Viral Proteins/biosynthesis , Gene Expression , Green Fluorescent Proteins , HEK293 Cells , Hepacivirus/genetics , Hepatocytes , Humans , Interferon-alpha/metabolism , Luminescent Proteins , MicroRNAs/genetics , Ribosomes/genetics
5.
J Virol Methods ; 169(2): 380-4, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20713089

ABSTRACT

Replication of infectious hepatitis C virus in Huh7 cells, a human hepatocyte cell line, has become possible due to the unique properties of the JFH1 isolate. Developing reporter virus systems for a simple titration has been attempted by integrating heterologous reporter genes into the JFH1 genome, resulting in a big infectivity reduction that limits the usefulness of such reporter systems. To overcome this problem, JFH1-infected Huh7 cells were cultured continuously for 2 years to obtain Huh7-adapted JFH1 variants capable of yielding up to 1000-fold higher titers. Sequence analysis of variant genome RNA suggested that this adapted population consisted mainly of two variants. By joining the 5'-half of the obtained representative viral complementary DNA (cDNA) fragments of the variants with the 3'-half of the wild-type's, two prototype clones, A/WT and B/WT, were constructed. Replication of A/WT and B/WT viruses in Huh7 cells showed up to 100-1000-fold higher titers than the wild-type. A Renilla luciferase cDNA was inserted into the Nonstructural Protein 5A region of the A/WT and B/WT cDNA to generate A/WT-Rluc and B/WT-Rluc, respectively. Transfection of Huh7 cells with in vitro-transcribed A/WT-Rluc and B/WT-Rluc RNA resulted in production of infectious viruses with approximately 15- and 25-fold higher titers, respectively, than the wild-type RNA. The replication of A/WT-Rluc and B/WT-Rluc viruses was more vigorous than the wild-type even with insertion of the luciferase cDNA showing a good correlation of luciferase activities with infectious titers. Furthermore, interferon-alpha inhibited the replication of A/WT-Rluc and B/WT-Rluc viruses in a dose-dependent manner as determined by a luciferase assay. These results imply that our system is potentially a tool useful for screening anti-hepatitis C virus drugs in a simple and time/cost-saving manner.


Subject(s)
Antiviral Agents/pharmacology , Drug Evaluation, Preclinical/methods , Hepacivirus/drug effects , Hepacivirus/physiology , Virus Replication/drug effects , Adaptation, Biological , Cell Line , Genes, Reporter , Hepatocytes/virology , Humans , Interferon-alpha/pharmacology , Luciferases, Renilla/genetics , Luciferases, Renilla/metabolism , Microbial Sensitivity Tests/methods , RNA, Viral/genetics , Sequence Analysis, DNA , Serial Passage , Staining and Labeling/methods , Virus Cultivation/methods
6.
Virus Res ; 152(1-2): 104-14, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20600392

ABSTRACT

Porcine reproductive and respiratory syndrome virus (PRRSV) open reading frame (ORF) 2a contains a small internal ORF (2b) capable of encoding a protein of 70 or 73 amino acids (aa), termed E protein. The function and biochemical information of the E protein are currently not clear. In the present investigation, it was shown that the E protein was mainly located in the endoplasmic reticulum (ER) and Golgi complex in MARC-145 cells. Deletion studies identified the N-terminal 15 residues as an ER localization sequence of the E protein, besides two other localization sequences within positions 23-50 and 50-73, and the N-myristoylation site significantly affected the subcellular localization of the N-terminal 15 residues. The membrane association assay demonstrated that the E protein was an integral membrane protein embedded in the phospholipid bilayer. However, neither the N-myristoylation site nor the hydrophilic C-terminal domain was essential to the membrane association of the E protein. The topology analysis revealed that this protein had N-terminus oriented toward the cytoplasm and C-terminus toward the ER lumen. Finally, immunofluorescence assay indicated that the E protein colocalized with GP2, GP3, GP4 and M protein in cotransfected cells, but not N protein.


Subject(s)
Porcine Reproductive and Respiratory Syndrome/virology , Porcine respiratory and reproductive syndrome virus/metabolism , Viral Nonstructural Proteins/metabolism , Amino Acid Motifs , Amino Acid Sequence , Animals , Cell Line , Endoplasmic Reticulum/metabolism , Endoplasmic Reticulum/virology , Golgi Apparatus/metabolism , Golgi Apparatus/virology , Haplorhini , Molecular Sequence Data , Porcine Reproductive and Respiratory Syndrome/metabolism , Porcine respiratory and reproductive syndrome virus/chemistry , Porcine respiratory and reproductive syndrome virus/genetics , Protein Sorting Signals , Protein Transport , Sequence Alignment , Swine , Viral Nonstructural Proteins/chemistry , Viral Nonstructural Proteins/genetics
7.
Biochem Biophys Res Commun ; 393(4): 598-602, 2010 Mar 19.
Article in English | MEDLINE | ID: mdl-20152818

ABSTRACT

The dendritic cell-specific intercellular adhesion molecule-3-grabbing nonintegrin (DC-SIGN) and DC-SIGN-related (DC-SIGNR) molecules on the cell surface are known to enhance human immunodeficiency virus type 1 (HIV-1) infection by capturing the virions and transmitting them to CD4+ T-cell, a process termed trans-infection. The neck region and carbohydrate recognition domain of the two proteins are important for efficient binding to the HIV-1 envelope protein. DC-SIGNR is polymorphic in Exons 4 and 5 that encode the neck region and carbohydrate recognition domain, respectively; the former contains a variable number of tandem repeats, and the latter the SNP (rs2277998). Since it remains unclear whether the DC-SIGNR polymorphism is related to the risk of HIV-1 infection, we tested possible effects of the polymorphism on HIV-1 trans-infection efficiency, by constructing six kinds of cDNAs encoding DC-SIGNR variants with various numbers of repeat units and various SNP. We were able to express the variants on the surface of Raji cells, a human B cell line. Flow cytometry showed that all the tested DC-SIGNR molecules were efficiently expressed on the cell surface at various levels; the assay for HIV trans-infection efficacy showed that all the tested variants had that activity with different efficacy levels. We found a correlation between the HIV trans-infection efficiency and the mean fluorescent intensity of DC-SIGNR expression (R(2)=0.95). Thus, our results suggest that the variation of the tested DC-SIGNR genotypes affects the efficacy of trans-infection by affecting the amounts of the protein expressed on the cell surface.


Subject(s)
CD4-Positive T-Lymphocytes/virology , Cell Adhesion Molecules/genetics , HIV Infections/genetics , HIV-1/immunology , Lectins, C-Type/genetics , Receptors, Cell Surface/genetics , CD4-Positive T-Lymphocytes/immunology , Cell Adhesion Molecules/metabolism , Cell Line , Dendritic Cells/immunology , Exons , HIV Infections/immunology , Humans , Lectins, C-Type/metabolism , Polymorphism, Single Nucleotide , Receptors, Cell Surface/metabolism , Tandem Repeat Sequences
8.
J Gen Virol ; 91(Pt 4): 919-30, 2010 Apr.
Article in English | MEDLINE | ID: mdl-19955560

ABSTRACT

The haemagglutinin (HA) glycoprotein of influenza A virus is a major antigen that initiates humoral immunity against infection; however, the cellular immune response against HA is poorly understood. Furthermore, HA-derived cytotoxic T-lymphocyte (CTL) epitopes are relatively rare in comparison to other internal gene products. Here, CTL epitopes of the HA serotype H5 protein were screened. By using in silico prediction, in vitro refolding and a T2 cell-binding assay, followed by immunization of HLA-A2.1/K(b) transgenic mice, an HLA-A*0201-restricted decameric epitope, RI-10 (H5 HA205-214, RLYQNPTTYI), was shown to elicit a robust CTL epitope-specific response. In addition, RI-10 and its variant, KI-10 (KLYQNPTTYI), were also demonstrated to be able to induce a higher CTL epitope-specific response than the influenza A virus dominant CTL epitope GL-9 (GILGFVFTL) in peripheral blood mononuclear cells of HLA-A*0201-positive patients who had recovered from H5N1 virus infection. Furthermore, the crystal structures of RI-10-HLA-A*0201 and KI-10-HLA-A*0201 complexes were determined at 2.3 and 2.2 A resolution, respectively, showing typical HLA-A*0201-restricted epitopes. The conformations of RI-10 and KI-10 in the antigen-presenting grooves in crystal structures of the two complexes show significant differences, despite their nearly identical sequences. These results provide implications for the discovery of diagnostic markers and the design of novel influenza vaccines.


Subject(s)
Epitopes, T-Lymphocyte , HLA-A Antigens/immunology , Hemagglutinin Glycoproteins, Influenza Virus/immunology , Influenza A Virus, H5N1 Subtype/immunology , T-Lymphocytes, Cytotoxic/immunology , Animals , Female , HLA-A Antigens/chemistry , HLA-A2 Antigen , Hemagglutinin Glycoproteins, Influenza Virus/chemistry , Humans , Immunization , Influenza, Human/immunology , Interferon-gamma/biosynthesis , Mice , Mice, Transgenic , Peptides/immunology , Protein Folding , X-Ray Diffraction
9.
Arch Biochem Biophys ; 487(1): 49-53, 2009 Jul 01.
Article in English | MEDLINE | ID: mdl-19416721

ABSTRACT

Receptor activator of nuclear factor-kappa B (RANK) and its ligand, RANKL play critical roles in bone re-modeling, immune function, vascular disease and mammary gland development. To study the interaction of RANK and RANKL, we have expressed both extracellular domain of RANK and ectodomain of RANKL using Escherichia coli expression system. RANK was expressed as an inclusion body first which properly refolded later, while RANKL was initially produced as a GST fusion protein, after which the GST was removed by enzyme digestion. Soluble RANK existed as a monomer while RANKL was seen as a trimer in solution, demonstrated by gel filtration chromatography and cross-linking experiment. The recombinant RANK and RANKL could bind to each other and the binding affinity of RANKL for RANK was measured with surface plasmon resonance technology and K(D) value is about 1.09 x 10(-10) M.


Subject(s)
RANK Ligand/metabolism , Receptor Activator of Nuclear Factor-kappa B/metabolism , Base Sequence , DNA Primers/genetics , Escherichia coli/genetics , Humans , In Vitro Techniques , Kinetics , Ligands , Protein Interaction Domains and Motifs , Protein Structure, Tertiary , RANK Ligand/chemistry , RANK Ligand/genetics , Receptor Activator of Nuclear Factor-kappa B/chemistry , Receptor Activator of Nuclear Factor-kappa B/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Surface Plasmon Resonance
10.
Cell Microbiol ; 11(5): 730-41, 2009 May.
Article in English | MEDLINE | ID: mdl-19207730

ABSTRACT

Influenza A virus matrix protein (M1) is the most abundant conservative protein that regulates the replication, assembly and budding of the viral particles upon infection. Several host cell factors have been determined to interact with M1 possibly in regulating influenza virus replication. By yeast two-hybrid screening, the isomerase cyclophilin A (CypA) was identified to interact with the M1 protein. CypA specifically interacted with M1 both in vitro and in vivo. The mutagenesis results showed CypA bound to the functional middle (M) domain of M1. The depletion of endogenous CypA by RNA interference resulted in the increase of influenza virus infectivity while overexpression of CypA caused decreasing the infectivity in affected cells. The immunofluorescence assays indicated that overexpressed CypA deduced the infectivity and inhibited the translocation of M1 protein into the nucleus while did not affect nucleoprotein entering the nucleus. Further studies indicated that overexpression of CypA significantly increased M1 self-association. Western blot with purified virions confirmed that CypA was encapsidated within the virus particle. These results together indicated that CypA interacted with the M1 protein and affected the early stage of the viral replication.


Subject(s)
Cyclophilin A/metabolism , Viral Matrix Proteins/metabolism , Animals , Binding Sites , Cell Line , Dogs , Humans , Influenza A Virus, H1N1 Subtype/metabolism , Influenza A Virus, H3N2 Subtype/metabolism , Influenza A Virus, H9N2 Subtype/metabolism , Mutagenesis, Site-Directed , Protein Interaction Mapping , Two-Hybrid System Techniques , Virion/physiology
11.
J Clin Virol ; 44(2): 141-4, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19083267

ABSTRACT

BACKGROUND: H3N2 is one of the main subtypes of influenza virus which circulates in human and swine population throughout the world. OBJECTIVES: To investigate the genetic correlation between H3N2 human and swine influenza viruses from the same region during the same season. STUDY DESIGN: Five H3N2 human and four H3N2 swine influenza viruses were isolated from Guangdong province of China in the winter of 2005. The molecular evolution of eight gene segments was analyzed. RESULTS: In the phylogenetic trees of gene segments, all H3N2 human isolates along with the 2000's human isolates formed a cluster, and most of the H3N2 swine isolates along with the 1990's human isolates formed another cluster except that the M and NS gene of A/Swine/Guangdong/01/2005 and the PA gene of A/Swine/Guangdong/02/2005 fell into the cluster of the classical swine influenza virus, indicating the reassortment between H3N2 human and H1N1 swine influenza viruses. CONCLUSIONS: In this study, H3N2 swine influenza viruses in 2005 did not originate from the 2000's H3N2 human influenza viruses, but from the 1990's H3N2 human isolates. In addition, the reassortment of H3N2 human and H1N1 swine influenza virus in pigs was common in recent years.


Subject(s)
Influenza A Virus, H3N2 Subtype/genetics , Influenza, Human/virology , Orthomyxoviridae Infections/veterinary , Swine Diseases/virology , Animals , China , Cluster Analysis , Evolution, Molecular , Humans , Influenza A Virus, H1N1 Subtype/genetics , Influenza A Virus, H3N2 Subtype/isolation & purification , Molecular Sequence Data , Orthomyxoviridae Infections/virology , Phylogeny , RNA, Viral/genetics , Reassortant Viruses/genetics , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid , Swine
12.
Biochem Biophys Res Commun ; 377(1): 7-11, 2008 Dec 05.
Article in English | MEDLINE | ID: mdl-18786508

ABSTRACT

The hepatitis C virus (HCV) production system consists of transfecting the human hepatoma cell line Huh7 with genomic HCV RNA (JFH1). To monitor HCV replication by fluorescence microscopy, we constructed a recombinant HCV clone expressing Azami-Green (mAG), a bright green fluorescent protein, by inserting the mAG gene into the nonstructural protein 5A (NS5A) gene; the resultant clone was designated JFH1-hmAG. The Huh-7.5.1 (a subclone of Huh7) cells transfected with JFH1-hmAG RNA were found to produce cytoplasmic NS5A-mAG, as readily visualized by fluorescence microscopy, and infectious virus, as assayed with the culture supernatant, indicating that JFH1-hmAG is infectious and replication-competent. Furthermore, the replication of this virus was inhibited by interferon alpha in a dose-dependent manner. These results suggest that JFH1-hmAG is useful for studying HCV life cycle and the mechanism of interferon's anti-HCV action and for screening and testing new anti-HCV drugs.


Subject(s)
Green Fluorescent Proteins/analysis , Hepacivirus/physiology , Microscopy, Fluorescence/methods , Virus Replication , Amino Acid Sequence , Cell Line , Green Fluorescent Proteins/genetics , Hepacivirus/drug effects , Hepacivirus/genetics , Humans , Interferon-alpha/pharmacology , Transfection , Virus Replication/drug effects
13.
Biol Pharm Bull ; 31(3): 386-90, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18310897

ABSTRACT

Alveolar epithelial cell death plays a crucial role in the progression of acute lung injury. We have demonstrated up-regulation of Fas expression on alveolar epithelial cells, and soluble Fas ligand secretion from inflammatory cells upon acute lung injury. Here we show that the lipopolysaccharide-stimulated human monocyte cell line THP-1 releases Fas ligand, and that conditioned medium from lipopolysaccharide-stimulated THP-1 cells induces apoptosis of the human pulmonary adenocarcinoma cell line A549. Activation of caspase-3 and -8 is associated with the apoptosis. Gene targeting on Fas in A549 cells by specific small interfering RNA impairs apoptosis induced by conditioned medium from activated THP-1, while that on Fas ligand in THP-1 cells impairs the apoptosis-inducing activity of the conditioned medium produced by lipopolysaccharide-stimulated cells. These results suggest that Fas ligand released by monocytes causes alveolar epithelial cell death through a Fas-dependent apoptotic mechanism in the development of acute lung injury.


Subject(s)
Apoptosis/drug effects , Epithelial Cells/pathology , Fas Ligand Protein/metabolism , Lung Diseases , Lung/pathology , Monocytes/metabolism , Acute Disease , Apoptosis/genetics , Cell Line, Tumor , Culture Media, Conditioned , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Fas Ligand Protein/genetics , Fas Ligand Protein/physiology , Humans , Lipopolysaccharides/pharmacology , Lung/cytology , Lung/drug effects , Lung Diseases/etiology , Lung Diseases/metabolism , Lung Diseases/pathology , Monocytes/cytology , Monocytes/drug effects , RNA Interference , RNA, Small Interfering/genetics , Transfection , fas Receptor/biosynthesis , fas Receptor/genetics
14.
J Med Virol ; 80(3): 373-82, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18205221

ABSTRACT

Immuno-genetherapy using dendritic cells (DCs) can be applied to human immunodeficiency virus type 1 (HIV-1) infection. Sendai virus (SeV) has unique features such as cytoplasmic replication and high protein expression as a vector for genetic manipulation. In this study, we compared the efficiency of inducing green fluorescent protein (GFP) and HIV-1 gene expression in human monocyte-derived DCs between SeV and adenovirus (AdV). Human monocyte-derived DCs infected with SeV showed the maximum gene expression 24 hr after infection at a multiplicity of infection (MOI) of 2. Although SeV vector showed higher cytopathic effect on DCs than AdV, SeV vector induced maximum gene expression earlier and at much lower MOI. In terms of cell surface phenotype, both SeV and AdV vectors induced DC maturation. DCs infected with SeV as well as AdV elicited HIV-1 specific T-cell responses detected by interferon gamma (IFN-gamma) enzyme-linked immunospot (Elispot). Our data suggest that SeV could be one of the reliable vectors for immuno-genetherapy for HIV-1 infected patients.


Subject(s)
Adenoviridae/genetics , Dendritic Cells/immunology , Dendritic Cells/virology , Genetic Vectors , HIV-1/genetics , HIV-1/immunology , Sendai virus/genetics , AIDS Vaccines/immunology , Adenoviridae/physiology , Animals , Dendritic Cells/metabolism , Gene Transfer Techniques , Genetic Therapy , Green Fluorescent Proteins/metabolism , HIV Infections/immunology , HIV Infections/virology , HIV-1/metabolism , Humans , Sendai virus/physiology , T-Lymphocytes/immunology , Transduction, Genetic , Vaccines, DNA/immunology
15.
Virus Res ; 131(2): 299-303, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18006100

ABSTRACT

A velogenic Newcastle disease virus (NDV) strain, designated as SRZ03, was isolated from an egg layer flock with NDV vaccine immunization failure in China in 2003. Recombination was found in the F gene of SRZ03. Complete genome sequences analysis indicated that the N-terminal of SRZ03 F gene originated from a genotype II NDV strain, whereas the C-terminal of F gene and the rest of the genes originated from a prevalent velogenic genotype VII NDV strain. It provides us valuable information for understanding the recombination of nonsegmented negative-sense RNA viruses.


Subject(s)
Newcastle disease virus/genetics , Recombination, Genetic , Viral Fusion Proteins/genetics , Animals , Base Sequence , Chick Embryo , China , Genotype , Molecular Sequence Data , Newcastle disease virus/isolation & purification , Phylogeny , RNA, Viral/genetics , Sequence Alignment , Sequence Analysis, DNA
16.
PLoS One ; 2(6): e526, 2007 Jun 13.
Article in English | MEDLINE | ID: mdl-17565379

ABSTRACT

Porcine reproductive and respiratory syndrome (PRRS) is a severe viral disease in pigs, causing great economic losses worldwide each year. The causative agent of the disease, PRRS virus (PRRSV), is a member of the family Arteriviridae. Here we report our investigation of the unparalleled large-scale outbreaks of an originally unknown, but so-called "high fever" disease in China in 2006 with the essence of PRRS, which spread to more than 10 provinces (autonomous cities or regions) and affected over 2,000,000 pigs with about 400,000 fatal cases. Different from the typical PRRS, numerous adult sows were also infected by the "high fever" disease. This atypical PRRS pandemic was initially identified as a hog cholera-like disease manifesting neurological symptoms (e.g., shivering), high fever (40-42 degrees C), erythematous blanching rash, etc. Autopsies combined with immunological analyses clearly showed that multiple organs were infected by highly pathogenic PRRSVs with severe pathological changes observed. Whole-genome analysis of the isolated viruses revealed that these PRRSV isolates are grouped into Type II and are highly homologous to HB-1, a Chinese strain of PRRSV (96.5% nucleotide identity). More importantly, we observed a unique molecular hallmark in these viral isolates, namely a discontinuous deletion of 30 amino acids in nonstructural protein 2 (NSP2). Taken together, this is the first comprehensive report documenting the 2006 epidemic of atypical PRRS outbreak in China and identifying the 30 amino-acid deletion in NSP2, a novel determining factor for virulence which may be implicated in the high pathogenicity of PRRSV, and will stimulate further study by using the infectious cDNA clone technique.


Subject(s)
Disease Outbreaks , Genetic Variation , Porcine Reproductive and Respiratory Syndrome/epidemiology , Porcine respiratory and reproductive syndrome virus/genetics , Porcine respiratory and reproductive syndrome virus/pathogenicity , Amino Acid Sequence , Animals , Animals, Newborn/genetics , Animals, Newborn/virology , China/epidemiology , Genes, Viral , Genome, Viral , Immunoenzyme Techniques , Molecular Sequence Data , Porcine Reproductive and Respiratory Syndrome/genetics , Sequence Homology, Amino Acid , Swine/genetics , Swine/virology
17.
AIDS Res Hum Retroviruses ; 23(5): 686-92, 2007 May.
Article in English | MEDLINE | ID: mdl-17530994

ABSTRACT

Dendritic cell-specific intercellular adhesion molecule-3 (ICAM-3) grabbing nonintegrin (DC-SIGN) and its homologue DC-SIGNR (DC-SIGN related) have been thought to play an important role in establishing HIV infection by enhancing trans-infection of CD4(+)T cells in the regional lymph nodes. To identify polymorphisms associated with HIV-exposed seronegative (ESN) individuals in Thais, genomic DNA from 102 HIV-seronegative individuals of HIV-seropositive spouses, 305 HIV-seropositive individuals, and 290 HIV-seronegative blood donors was genotyped for two single nucleotide polymorphisms (SNPs) in DC-SIGN promoter (-139A/G and 336A/G), a repeat number of 69 bp in Exon 4 of DC-SIGN and DC-SIGNR, and one SNP in Exon 5 of DC-SIGNR (rs2277998A/G). We found that the proportion of individuals possessing a heterozygous 7/5 and 9/5 repeat and A allele at rs2277998 of DC-SIGNR in HIV-seronegative individuals of HIV-seropositive spouses was significantly higher than HIV-seropositive individuals [p = 0.0373, OR (95% CI) = 0.57 (0.32,1.01); p = 0.0232, OR (95% CI) = 0.38 (0.15,0.98); and p = 0.0445, OR (95% CI) = 0.61 (0.37,1.02), respectively]. Analysis after stratifying by gender showed that these associations were observed only in females but not in males. Moreover, HIV-seropositive females tend to have a homozygous 7/7 repeat more frequently than HIV-seronegative females with a marginal level of significance [p = 0.0556, OR (95% CI) = 1.79 (0.94,3.40)]. Haplotype analysis showed that the proportion of individuals possessing the 5A haplotype in HIV-seronegative females was significantly higher than HIV-seropositive females [p = 0.0133, OR = 0.50 (0.27,0.90)]. These associations suggest that DC-SIGNR may affect susceptibility to HIV infection by a mechanism that is different in females and males. Further studies are warranted to investigate the mechanisms of their function.


Subject(s)
Cell Adhesion Molecules/genetics , Genetic Predisposition to Disease , HIV Infections/epidemiology , HIV Infections/genetics , HIV-1 , Lectins, C-Type/genetics , Polymorphism, Single Nucleotide , Receptors, Cell Surface/genetics , Adult , Cells, Cultured , Dendritic Cells , Female , Genotype , Haplotypes , Humans , Male , Reverse Transcriptase Polymerase Chain Reaction , Thailand/epidemiology
18.
Psychiatry Clin Neurosci ; 60(6): 645-51, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17109697

ABSTRACT

The authors studied the localization of P300 magnetic sources using the multiple signal classification (MUSIC) algorithm. Six healthy subjects (aged 24-34 years old) were investigated with 148-channel whole-head type magnetencephalography using an auditory oddball paradigm in passive mode. The authors also compared six stimulus combinations in order to find the optimal stimulus parameters for P300 magnetic field (P300m) in passive mode. Bilateral MUSIC peaks were located on the mesial temporal, superior temporal and parietal lobes. Interestingly, all MUSIC peaks in these regions emerged earlier in the right hemisphere than in the left hemisphere, suggesting that the right hemisphere has predominance over the left in the processing activity associated with P300m. There were no significant differences among the six stimulus combinations in evoking those P300m sources. The results of the present study suggest that the MUSIC algorithm could be a useful tool for analysis of the time-course of P300m.


Subject(s)
Electroencephalography/classification , Electroencephalography/statistics & numerical data , Event-Related Potentials, P300/physiology , Magnetoencephalography/classification , Magnetoencephalography/statistics & numerical data , Adult , Algorithms , Data Interpretation, Statistical , Electromagnetic Fields , Female , Humans , Male
19.
Acta Med Okayama ; 60(1): 51-8, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16508689

ABSTRACT

Previous EEG studies have shown that transcendental meditation (TM) increases frontal and central alpha activity. The present study was aimed at identifying the source of this alpha activity using magnetoencephalography (MEG) and electroencephalography (EEG) simultaneously on eight TM practitioners before, during, and after TM. The magnetic field potentials corresponding to TM-induced alpha activities on EEG recordings were extracted, and we attempted to localize the dipole sources using the multiple signal classification (MUSIC) algorithm, equivalent current dipole source analysis, and the multiple spatio-temporal dipole model. Since the dipoles were mapped to both the medial prefrontal cortex (mPFC) and anterior cingulate cortex (ACC), it is suggested that the mPFC and ACC play an important role in brain activity induced by TM.


Subject(s)
Alpha Rhythm , Gyrus Cinguli/physiology , Magnetoencephalography , Meditation , Prefrontal Cortex/physiology , Adult , Algorithms , Electroencephalography , Female , Gyrus Cinguli/anatomy & histology , Humans , Male , Middle Aged , Prefrontal Cortex/anatomy & histology
20.
Antivir Chem Chemother ; 16(6): 363-73, 2005.
Article in English | MEDLINE | ID: mdl-16329284

ABSTRACT

The integration of reverse transcribed proviral DNA into a host genome is an essential event in the human immunodeficiency virus type 1 (HIV-1) replication life cycle. Therefore, the viral enzyme integrase (IN), which plays a crucial role in the integration event, has been an attractive target of anti-retroviral drugs. Several IN inhibitory compounds have been reported previously, yet none has been successful in clinical use. To find a new, more successful IN inhibitor, we screened a diverse library of 12 000 small molecular weight compounds randomly by in vitro strand-transfer assay. We identified a series of substituted carbazoles that exhibit strand-transfer inhibitory activity at low micromolar concentrations. Of these, the most potent compound exhibited an IC50 of 5.00+/-3.31 microM (CA-0). To analyse the structural determinants of strand-transfer inhibitory activity of the carbazole derivatives, we selected 23 such derivatives from our compound library and performed further analyses. Of these 23 compounds, six showed strong strand-transfer inhibition. The inhibition kinetics analyses and ethidium bromide displacement assays indicated that the carbazole derivatives are competitive inhibitors and not intercalators. An HeLa4.5/LTR-nEGFP cell line was employed to evaluate in vitro virus replication inhibition of the carbazole derivatives, and IC50 levels ranged from 0.48-1.52 microM. Thus, it is possible that carbazole derivatives, which possess structures different from previously-reported IN inhibitors, may become novel lead compounds in the development of IN inhibitors.


Subject(s)
Anti-HIV Agents/pharmacology , Carbazoles/therapeutic use , Enzyme Inhibitors/therapeutic use , HIV Integrase/metabolism , HIV-1/drug effects , Anti-HIV Agents/chemistry , Anti-HIV Agents/therapeutic use , Base Sequence , Carbazoles/chemistry , Carbazoles/pharmacology , Drug Design , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Gene Transfer Techniques , Humans , Microbial Sensitivity Tests , Oligodeoxyribonucleotides , Structure-Activity Relationship
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