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1.
J Biol Chem ; 294(28): 10746-10757, 2019 07 12.
Article in English | MEDLINE | ID: mdl-31076509

ABSTRACT

In eukaryotes, ribosome assembly is a rate-limiting step in ribosomal biogenesis that takes place in a distinctive subnuclear organelle, the nucleolus. How ribosomes get assembled at the nucleolar site by forming initial preribosomal complexes remains poorly characterized. In this study, using several human and murine cell lines, we developed a method for isolation of native mammalian preribosomal complexes by lysing cell nuclei through mild sonication. A sucrose gradient fractionation of the nuclear lysate resolved several ribonucleoprotein (RNP) complexes containing rRNAs and ribosomal proteins. Characterization of the RNP complexes with MS-based protein identification and Northern blotting-based rRNA detection approaches identified two types of preribosomes we named here as intermediate preribosomes (IPRibs) and composed preribosome (CPRib). IPRib complexes comprised large preribosomes (105S to 125S in size) containing the rRNA modification factors and premature rRNAs. We further observed that a distinctive CPRib complex consists of an 85S preribosome assembled with mature rRNAs and a ribosomal biogenesis factor, Ly1 antibody-reactive (LYAR), that does not associate with premature rRNAs and rRNA modification factors. rRNA-labeling experiments uncovered that IPRib assembly precedes CPRib complex formation. We also found that formation of the preribosomal complexes is nutrient-dependent because the abundances of IPRib and CPRib decreased substantially when cells were either deprived of amino acids or exposed to an mTOR kinase inhibitor. These findings indicate that preribosomes form via dynamic and nutrient-dependent processing events and progress from an intermediate to a composed state during ribosome maturation.


Subject(s)
RNA Precursors/metabolism , Ribosomes/metabolism , Animals , Cell Line , DNA-Binding Proteins/metabolism , Humans , Mice , N-Terminal Acetyltransferases/metabolism , RNA Processing, Post-Transcriptional , RNA, Ribosomal/metabolism , Ribonucleoproteins/chemistry , Ribonucleoproteins/metabolism , Ribosomal Proteins/metabolism , TOR Serine-Threonine Kinases/antagonists & inhibitors , TOR Serine-Threonine Kinases/metabolism
2.
Korean J Parasitol ; 56(3): 267-274, 2018 Jun.
Article in English | MEDLINE | ID: mdl-29996630

ABSTRACT

Aim of the present study was to provide presence of opisthorchiid metacercariae in cyprinid fish Leuciscus idus in Nura-Sarysu river, Kazakhstan. Infection rate of the ides by the metacercariae was 42%. The metacercariae, similar morphologically to those of the liver flukes, were found: elliptical in shape, 0.19-0.25×0.15-0.22 mm, oral and ventral suckers nearly equal size, and excretory bladder O-shape with black content, occupying posterior part of the body. The metacercariae were divided into 2 groups with differences in size and thickness of cyst wall. Adult flukes were recovered from the Syrian hamsters infected with the opisthorch metacercariae and identified with morphological characters to Opisthorchis felineus and Metorchis bilis. DNA sequences of ITS1, ITS2, and cox1 supported the taxonomic assignment.


Subject(s)
Cyprinidae/parasitology , Metacercariae/isolation & purification , Opisthorchis/isolation & purification , Rivers , Trematoda/isolation & purification , Animals , Cricetinae , DNA, Helminth/genetics , Helminth Proteins/genetics , Kazakhstan , Mesocricetus , Metacercariae/anatomy & histology , Opisthorchis/anatomy & histology , Opisthorchis/classification , Opisthorchis/genetics , Sequence Analysis, DNA , Trematoda/anatomy & histology , Trematoda/classification , Trematoda/genetics
3.
Folia Parasitol (Praha) ; 632016 Jul 14.
Article in English | MEDLINE | ID: mdl-27507639

ABSTRACT

Monoclonal antibody specific for an epitope of cretory-secretory antigen protein of Opisthorchis felineus (Rivolta, 1884) (Trematoda: Opisthorchiidae) with a molecular weight of 28 kDa was used in a sandwich enzyme-linked immunosorbent assay (ELISA) for immobilisation of liver fluke specific antigen to the solid phase. Examination of human sera by this ELISA compared with commercial assays demonstrated that the monoclonal antibody epitope is located within this significant parasite protein. Anti-idiotypic antibody specific for the paratope of this monoclonal antibody was obtained by a hybridoma technique. Mimicking an epitope of excretory-secretory antigen of O. felineus, it had the capacity to bind specific antibody and elicit an antibody response. The value of anti-idiotypic antibody as a substitute for the liver fluke antigen was tested by ELISA using serum samples of infected dogs. Anti-idiotypic antibody proved to be of value in both an indirect-ELISA and a competitive-ELISA for diagnosis of opisthorchiasis. Mature trematodes were isolated from all infected animals. The faecal egg counts were negative in dogs with a relatively small number of parasites, despite finding antibodies in serum by ELISA. Substitution of parasite antigen with anti-idiotype avoids the use of experimental animals and also reduces time-consuming steps of antigen preparation.


Subject(s)
Antibodies, Anti-Idiotypic/metabolism , Enzyme-Linked Immunosorbent Assay , Opisthorchiasis/blood , Animals , Humans , Opisthorchiasis/diagnosis , Opisthorchis , Sensitivity and Specificity
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