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1.
J Phys Chem B ; 121(49): 11144-11162, 2017 12 14.
Article in English | MEDLINE | ID: mdl-29140701

ABSTRACT

The host-guest complexation of hydrocarbons (22 guest molecules) with cucurbit[7]uril was investigated in aqueous solution using the indicator displacement strategy. The binding constants (103-109 M-1) increased with guest size, pointing to the hydrophobic effect and dispersion interactions as driving forces. The measured affinities provide unique benchmark data for the binding of neutral guest molecules. Consequently, a computational blind challenge, the HYDROPHOBE challenge, was conducted to allow a comparison with state-of-the-art computational methods for predicting host-guest affinity constants. In total, three quantum-chemical (QM) data sets and two explicit-solvent molecular dynamics (MD) submissions were received. When searching for sources of uncertainty in predicting the host-guest affinities, the experimentally known hydration energies of the investigated hydrocarbons were used to test the employed solvation models (explicit solvent for MD and COSMO-RS for QM). Good correlations were obtained for both solvation models, but a rather constant offset was observed for the COSMO data, by ca. +2 kcal mol-1, which was traced back to a required reference-state correction in the QM submissions (2.38 kcal mol-1). Introduction of the reference-state correction improved the predictive power of the QM methods, particularly for small hydrocarbons up to C5.


Subject(s)
Hydrocarbons/chemistry , Macrocyclic Compounds/chemistry , Molecular Dynamics Simulation , Quantum Theory , Thermodynamics , Binding Sites , Molecular Structure , Water/chemistry
2.
J Phys Chem A ; 116(13): 3396-403, 2012 Apr 05.
Article in English | MEDLINE | ID: mdl-22409314

ABSTRACT

Cyanoformyl chloride and cyanoformyl bromide, XC(O)CN (X = Cl and Br), have been investigated in the gas phase by UV photoelectron and mid-infrared spectroscopies. The ground-state geometries of the neutral molecules have been obtained from quantum-chemical calculations at the B3LYP and CCSD(T) levels using the aug-cc-pVTZ basis set. The individual spectroscopies provide a detailed investigation into the vibrational and electronic character of the molecules and are supported by quantum-chemical calculations. The results are compared to data for structurally and chemically related molecules.

3.
J Am Chem Soc ; 124(38): 11349-57, 2002 Sep 25.
Article in English | MEDLINE | ID: mdl-12236750

ABSTRACT

The quenching of the n,pi*-excited azoalkane 2,3-diazabicyclo[2.2.2]oct-2-ene by 19 heteroatom-containing electron and hydrogen donors, that is, amines, sulfides, ethers, and alcohols, was investigated in the gas phase. Deuterium isotope effects were measured for 9 selectively deuterated derivatives. The data support the involvement of an excited charge-transfer complex, that is, an exciplex, for tertiary amines and sulfides, and a competitive direct hydrogen transfer from the C-H bonds of ethers or from the N-H or O-H bonds of secondary and primary amines or alcohols. The recently observed "inverted" solvent effect for the fluorescence quenching of azoalkanes by amines and sulfides in solution is supported by the observed rate constants in the gas phase, which are substantially larger than those in solution. A more pronounced inverted solvent effect for the weaker electron-donating sulfides and a presumably faster exciplex deactivation result in a switch-over in absolute reactivity relative to tertiary amines in the gas phase. Most importantly, the kinetic data demonstrate that the reactivity of the strongly dipolar O-H and N-H bonds in photoinduced hydrogen abstraction reactions shows a larger decrease upon solvation than that of the less polar C-H bonds. The azoalkane data are compared with previous studies on quenching of n,pi*-triplet-excited ketones in the gas phase.

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