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1.
Pediatr Surg Int ; 32(12): 1183-1191, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27651370

ABSTRACT

PURPOSE: The clinical application of autologous tissue-engineered skin analogs is an important strategy to cover large skin defects. Investigating biological dynamics, such as reinnervation after transplantation, is essential to improve the quality of such skin analogs. Previously, we have examined that our skin substitutes are reinnervated by host peripheral nerve fibers as early as 8 weeks after transplantation. Here, we wanted to investigate the presence and possible differences regarding myelinated and unmyelinated host nerve fibers 15 weeks after the transplantation of light and dark human tissue-engineered skin analogs. METHODS: Human epidermal keratinocytes, melanocytes, and dermal fibroblasts were isolated from human light and dark skin biopsies. Keratinocytes and melanocytes were seeded on fibroblast-containing collagen type I hydrogels after expansion in culture. After additional culturing, the tissue-engineered dermo-epidermal skin analogs were transplanted onto full-thickness skin wounds created on the back of immuno-incompetent rats. Skin substitutes were excised and analyzed 15 weeks after transplantation. Histological sections were examined with regard to the ingrowth pattern of myelinated and unmyelinated nerve fibers into the skin analogs using markers, such as Substance P, NF200, and S100-Beta. RESULTS: We found myelinated and unmyelinated peripheral host nerve fibers 15 weeks after transplantation in the dermal part of our human skin substitutes. In particular, we identified large-diameter-myelinated Aß- and Aδ-fibers, and small-diameter C-fibers. Furthermore, we observed myelinated nerves in close proximity to CD31-positive blood capillaries. In the long run, both types of ingrown host fibers showed an identical pattern in both light and dark skin analogs. CONCLUSION: Our data suggest that myelinated and unmyelinated peripheral nerves reinnervate human skin substitutes in a long-term in vivo transplantation assay. Our tissue-engineered skin analogs attract A- and C-fibers to supply both light and dark skin analogs. Potentially, this process restores skin sensitivity and has, therefore, a significant relevance with regard to future application of autologous pigmented dermo-epidermal skin substitutes onto patients.


Subject(s)
Dermis/innervation , Epidermis/innervation , Nerve Fibers, Myelinated/transplantation , Nerve Fibers, Unmyelinated/transplantation , Skin, Artificial , Tissue Engineering/methods , Adolescent , Animals , Cells, Cultured , Child , Child, Preschool , Dermis/transplantation , Epidermis/transplantation , Female , Humans , Infant , Male , Rats , Skin Transplantation/methods
2.
Curr Pharm Biotechnol ; 13(8): 1513-21, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22283763

ABSTRACT

INTRODUCTION: In linkage and association studies the DTNBP1 gene has been identified as a major susceptibility gene for schizophrenia. Reduced expression of DTNBP1 was found in the hippocampus and prefrontal cortex in post mortem brains of schizophrenic patients. In vitro and animal models provide evidence that the DTNBP1 gene product dysbindin modulates the activity of the neurotransmitter glutamate in hippocampal neurons and is crucial for cell functioning and synaptogenesis. This study is the first to investigate the effects of genetic variants of DTNBP1 on the status of the glutamate system as well as neuronal integrity (N-acetylaspartate, NAA) in the hippocampus and a cortical region, the anterior cingulate cortex (ACC), in humans. METHODS: In 79 healthy subjects, the association of single nucleotide polymorphisms (SNPs) rs760665 and rs909706 with absolute concentrations of glutamate and NAA in the left hippocampus and the ACC were investigated, using proton magnetic resonance spectroscopy (MRS) at 3 Tesla and a well established quantification procedure. RESULTS: Hippocampal glutamate concentration was significantly affected by genotype of rs760665 (F=4.406, df=2,p=0.016) and rs909706 (F=3.171,df=2,p=0.048). For the concentration of NAA, a weak association with rs760665 was observed in the contrast analysis. None of the metabolites measured in the ACC showed a significant connection with either genotype. CONCLUSION: The results support a role of DTNBP1 gene variants in the glutamate neurotransmission system in the human brain at least in the hippocampus. This is compatible to growing evidence of a crucial role of glutamate in the pathobiology of schizophrenia. In addition, the weak association between DTNBP1 genotype and NAA is in line with a regulatory influence of dysbindin on synaptogenesis and neuronal survival.


Subject(s)
Carrier Proteins/genetics , Glutamic Acid/physiology , Hippocampus/physiology , Synaptic Transmission/physiology , Adult , Dysbindin , Dystrophin-Associated Proteins , Female , Genotype , Humans , Magnetic Resonance Spectroscopy , Male , Polymorphism, Single Nucleotide , Young Adult
3.
Mol Cell Neurosci ; 46(2): 483-97, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21145970

ABSTRACT

The extracellular membrane-associated protein F-spondin has been implicated in cell-matrix and cell-cell adhesion and plays an important role in axonal pathfinding. We report here that F-spondin is expressed in non-neuronal cells in the embryonic chicken ciliary ganglion (CG) and robustly promotes survival of cultured CG neurons. Using deletion constructs of F-spondin we found that the amino-terminal Reelin/Spondin domain cooperates with thrombospondin type 1 repeat (TSR) 6, a functional TGFß-activation domain. In ovo treatment with blocking antibodies raised against the Reelin/Spondin domain or the TSR-domains caused increased apoptosis of CG neurons during the phase of programmed cell death and loss of about 30% of the neurons compared to controls. The Reelin/Spondin domain receptor - APP and its downstream signalling molecule disabled-1 are expressed in CG neurons. F-spondin induced rapid phosphorylation of disabled-1. Moreover, both blocking the central APP domain and interference with disabled-1 signalling disrupted the survival promoting effect of F-spondin. Taken together, our data suggest that F-spondin can promote neuron survival by a mechanism involving the Reelin/Spondin and the TSR domains.


Subject(s)
Adaptor Proteins, Signal Transducing/metabolism , Extracellular Matrix Proteins/metabolism , Ganglia, Parasympathetic/metabolism , Nerve Tissue Proteins/metabolism , Neurogenesis/physiology , Neurons/metabolism , Animals , Apoptosis/physiology , Cell Survival , Chick Embryo , Ganglia, Parasympathetic/embryology , Humans , Immunoblotting , Immunohistochemistry , In Situ Hybridization , In Situ Nick-End Labeling , Neurons/cytology , Reelin Protein , Transfection
4.
J Hum Hypertens ; 25(4): 256-61, 2011 Apr.
Article in English | MEDLINE | ID: mdl-20463749

ABSTRACT

Hypertension is associated with an increased risk of cognitive decline, which is generally regarded as a consequence of advanced cerebral atherosclerosis. Many hypertensive patients, however, suffer from cognitive decline long before they have any signs of cerebrovascular disease. Therefore, this study examines direct effects of blood pressure on neurotransmitter status in the hippocampus, a vulnerable cerebral structure relevant for memory consolidation. Absolute glutamate concentration and N-acetylaspartate (NAA) concentration as an alternative marker of neuronal integrity were determined in the hippocampus and the cerebral cortex (anterior cingulate cortex; ACC) by 3-T proton magnetic resonance spectroscopy in 16 probands without any history of cerebrovascular disease. Memory function was tested by the auditory verbal learning test (AVLT) and the rivermead behavioural memory test (RBMT). Arterial stiffness was assessed by augmentation index (AI). Mean arterial pressure showed a significant negative age-adjusted correlation to absolute glutamate concentrations in the hippocampus (R=-0.655, P=0.011), but not in the ACC. There was no significant correlation of mean arterial pressure and NAA in either hippocampus or ACC. AI did not affect hippocampal glutamate. Moreover, there was a significant negative correlation between mean arterial pressure and AVLT (r=-0.558, P=0.025) and RBMT score (r=-0.555, P=0.026). There is an inverse relation between blood pressure and the concentration of hippocampal glutamate. Glutamate is essential for long-term potentiation, the neurobiological correlate for memory formation in the hippocampus. Thus, hypertension-associated cognitive decline may not only be mediated by structural atherosclerotic wall changes, but also by functional changes in neurotransmission.


Subject(s)
Blood Pressure , Cognition Disorders/etiology , Cognition , Glutamic Acid/metabolism , Hippocampus/physiopathology , Hypertension/physiopathology , Memory , Adult , Aspartic Acid/analogs & derivatives , Aspartic Acid/metabolism , Cognition Disorders/metabolism , Cognition Disorders/physiopathology , Cognition Disorders/psychology , Female , Germany , Gyrus Cinguli/metabolism , Gyrus Cinguli/physiopathology , Hippocampus/metabolism , Humans , Hypertension/complications , Hypertension/metabolism , Hypertension/psychology , Linear Models , Magnetic Resonance Spectroscopy , Male , Middle Aged , Neuropsychological Tests , Young Adult
5.
Curr Opin Cell Biol ; 22(1): 81-7, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20022232

ABSTRACT

The asymmetric cell division process is required for cellular differentiation and embryonic development. Recent evidence obtained in Drosophila and C. elegans suggest that this process occurs by non-equivalent distribution of proteins or mRNA (intrinsic factors) to daughter cells, or by their differential exposure to cell extrinsic factors. In contrast, haploid fission yeast sister cells developmentally differ by inheriting sister chromatids that are differentiated by epigenetic means. Specifically, the act of DNA replication at the mating-type locus in yeast switches it's alternate alleles only in one specific member of chromosome 2 sister chromatids in nearly every chromosome replication cycle. To employ this kind of mechanism for cellular differentiation, strictly based on Watson-Crick structure of DNA in diploid organism, selective segregation mechanism is required to coordinate distribution of potentially differentiated sister chromatids to daughter cells. Genetic evidence to this postulate was fortuitously provided by the analysis of mitotic recombinants of chromosome 7 in mouse cells. Remarkably, the biased segregation occurs in some cell types but not in others and the process seems to be chromosome-specific. This review summarizes the discovery of selective chromatid segregation phenomenon and it suggests that such a process of Somatic Sister chromatid Imprinting and Selective chromatid Segregation (SSIS model) might explain development in eukaryotes, such as that of the body axis left-right visceral organs laterality specification in mice.


Subject(s)
Body Patterning/physiology , Cell Differentiation/physiology , Chromatids/physiology , Chromosome Segregation , Mitosis , Animals , Caenorhabditis elegans/cytology , Caenorhabditis elegans/embryology , Caenorhabditis elegans/growth & development , DNA Replication , Drosophila melanogaster/cytology , Drosophila melanogaster/embryology , Drosophila melanogaster/growth & development , Dyneins/genetics , Dyneins/metabolism , Mice , Spindle Apparatus/metabolism
6.
J Inherit Metab Dis ; 32(5): 651, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19728140

ABSTRACT

It has been suggested that the very low incidence of atherosclerosis in glycogen storage disease type Ia (GSD Ia) subjects might be attributed to elevated levels of uric acid, one of the potent low molecular- weight antioxidants found in plasma. The present communication describes a use of two analytical methods-cyclic voltammetry and ferric reducing ability of plasma-and also two chemiluminescence methods to evaluate the total oxidant-scavenging capacities (TOSC) of plasma from GSD Ia patients. Our results verified the elevation of TOSC in GSD Ia patients and we propose the inclusion of luminescence and cyclic voltammetry assays as reliable methods for estimating TOSC in a variety of clinical disorders. Our findings with the cyclic voltammetry method add support to the assumption that the elevated uric acid levels might be the main contributor to plasma antioxidant capacity and possible protection against atherosclerosis.


Subject(s)
Fluorescence Recovery After Photobleaching , Free Radical Scavengers/blood , Glycogen Storage Disease Type I/blood , Luminescent Measurements/methods , Oxidants/blood , Adolescent , Adult , Case-Control Studies , Child , Child, Preschool , Electric Conductivity , Electrochemistry/methods , Free Radical Scavengers/analysis , Glycogen Storage Disease Type I/diagnosis , Humans , Luminol/chemistry , Oxidants/analysis , Oxidation-Reduction , Reproducibility of Results , Young Adult
7.
Gastroenterol Res Pract ; 2009: 623871, 2009.
Article in English | MEDLINE | ID: mdl-19587826

ABSTRACT

OBJECTIVE: Atrial Natriuretic Peptide (ANP) has natriuretic and diuretic effects, synthesized and stored in the atrial cells, released in response to stretch of the atrial muscle during increase venous return. Acute gastroenteritis (AGE) causes dehydration. We intend to determine whether the decrease in venous return due to dehydration would lead to a decrease in ANP levels. PATIENTS AND METHODS: This is a prospective observational controlled study. Blood collected from 30 children with AGE and ANP's levels were compared with 25 controls. ANP levels were determined by radioimmunoassay. RESULTS: The study group was in mild dehydration. As a significant difference was found in ANP levels between children in the 3mo-3y group and older children 3y-14y. We analyzed the results according to age. No difference was found between children with AGE and control, in the 3mo-3y, ANP was 12.1 +/- 11 pg/ml versus 13.4 +/- 12 pg/ml respectively, and 3 +/- 2 versus 3.8 +/- 3 pg/ml in the 3y-14y groups, respectively. CONCLUSION: Dehydration due to AGE does not change the ANP's plasma levels. A weak positive correlation between sodium levels and ANP was found r = 0.29. The significant finding of our study is the difference in ANP levels related to age, in the control as well as the GE group.

8.
Genetics ; 180(1): 27-39, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18723894

ABSTRACT

The molecular mechanisms mediating eukaryotic replication termination and pausing remain largely unknown. Here we present the molecular characterization of Rtf1 that mediates site-specific replication termination at the polar Schizosaccharomyces pombe barrier RTS1. We show that Rtf1 possesses two chimeric myb/SANT domains: one is able to interact with the repeated motifs encoded by the RTS1 element as well as the elements enhancer region, while the other shows only a weak DNA binding activity. In addition we show that the C-terminal tail of Rtf1 mediates self-interaction, and deletion of this tail has a dominant phenotype. Finally, we identify a point mutation in Rtf1 domain I that converts the RTS1 element into a replication barrier of the opposite polarity. Together our data establish that multiple protein DNA and protein-protein interactions between Rtf1 molecules and both the repeated motifs and the enhancer region of RTS1 are required for site-specific termination at the RTS1 element.


Subject(s)
DNA Replication , Enhancer Elements, Genetic , Saccharomyces cerevisiae Proteins/genetics , Schizosaccharomyces/genetics , TATA-Box Binding Protein/genetics , Amino Acid Motifs , Amino Acid Sequence , DNA/chemistry , DNA, Ribosomal/chemistry , Fungal Proteins/chemistry , Models, Genetic , Molecular Sequence Data , Point Mutation , Protein Structure, Tertiary , Sequence Homology, Amino Acid , Two-Hybrid System Techniques
9.
Arch Dis Child ; 93(8): 690-4, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18337275

ABSTRACT

OBJECTIVE: To assess the clinical and laboratory features of acute otitis media (AOM) in infants younger than 2 months, to look for factors predicting bacterial otitis, and to evaluate the accuracy of AOM diagnosis among paediatricians. METHODS: The study population comprised a cohort of 277 hospitalised infants up to 61 days old that were treated for the first episode of AOM in a paediatric department. We reviewed their medical records and analysed the demographic, clinical and laboratory data, and the diagnosis made by both paediatricians and otolaryngologists. RESULTS: Presenting symptoms were mainly respiratory (70.0%) and fever (62.5%). The most common pathogens were Streptococcus pneumoniae and Haemophilus influenzae. Gram-negative bacilli grew in 10.5% of the infants. Multivariate analysis revealed that AOM in the second month of life was associated with male gender, concurrent bronchiolitis and diarrhea. Although high leukocyte count was associated with bacterial pathogen, more than 70% of the patients with positive culture had normal white blood cell counts. The paediatrician diagnosed only 45% of the patients subsequently diagnosed with AOM by an otolaryngologist. CONCLUSIONS: The absence of predictors for bacterial infection in more than 70% of bacterial AOM suggests that empirical antibiotic treatment should be advised for the young infants with AOM even when afebrile and with normal laboratory profile. A low diagnostic rate of AOM by the paediatrician emphasizes the need for improvement in examination skills and instrumentation to allow a thorough ear evaluation in children of a very young age.


Subject(s)
Bacterial Infections/diagnosis , Clinical Competence/standards , Otitis Media/diagnosis , Pediatrics/standards , Acute Disease , Diagnosis, Differential , Female , Humans , Infant , Infant, Newborn , Male , Otitis Media/microbiology , Otolaryngology/standards
10.
J Pediatr Endocrinol Metab ; 18(4): 385-93, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15844473

ABSTRACT

BACKGROUND: POU1F1, a pituitary-specific transcription factor of the class 1 POU family, is crucial for the development and differentiation of the anterior pituitary gland. Mutations in the POU1F1 gene have been shown to be responsible for a syndrome of combined pituitary hormone deficiency (CPHD), including prolactin, growth hormone and thyroid-stimulating hormone deficiencies. METHODS: Five patients with CPHD from three families were evaluated. The clinical and biochemical data were taken from the medical records. DNA was analyzed by polymerase chain reaction (PCR), denaturing gradient gel electrophoresis (DGGE), and sequencing. RESULTS: Molecular analysis yielded three novel mutations in POU1F1: W193X, Q242R (-2 bp), and F262L. CONCLUSIONS: Three novel POU1F1 mutations were detected in Israeli patients with CPHD. Two of them, a W193X missense mutation and a deletion of two adenine bases at position 242Q, may lead to the production of a truncated protein that lacks the entire POU homeodomain or part of it, respectively. The third mutation, F262L, resides in the POU homeodomain and hence might change the activity of the protein.


Subject(s)
DNA-Binding Proteins/genetics , Mutation , Pituitary Hormones/deficiency , Transcription Factors/genetics , Arginine , Child , Child, Preschool , Female , Gene Deletion , Glutamine , Humans , Israel , Leucine , Male , Middle Aged , Mutation, Missense , Phenylalanine , Protein Structure, Tertiary/genetics , Transcription Factor Pit-1 , Tryptophan
13.
Genet Med ; 3(5): 343-8, 2001.
Article in English | MEDLINE | ID: mdl-11545687

ABSTRACT

PURPOSE: Niemann-Pick disease type C (NP-C) is an autosomal recessive lipid storage disease manifested by an impairment in cellular cholesterol homeostasis. The clinical phenotype of NP-C is extremely variable, ranging from an acute neonatal form to an adult late-onset presentation. To facilitate phenotype-genotype studies, we have analyzed multiple Israeli NP-C families. METHODS: The severity of the disease was assessed by the age at onset, hepatic involvement, neurological deterioration, and cholesterol esterification studies. Screening of the entire NPC1 coding sequence allowed for molecular characterization and identification of disease causing mutations. RESULTS: A total of nine NP-C index cases with mainly neurovisceral involvement were characterized. We demonstrated a possible link between the severity of the clinical phenotype and the cholesterol esterification levels in fibroblast cultures following 24 hours of in vitro cholesterol loading. In addition, we identified eight novel mutations in the NPC1 gene. CONCLUSIONS: Our results further support the clinical and allelic heterogeneity of NP-C and point to possible association between the clinical and the biochemical phenotype in distinct affected Israeli families.


Subject(s)
Carrier Proteins/genetics , Membrane Glycoproteins/genetics , Mutation/genetics , Niemann-Pick Diseases/genetics , Niemann-Pick Diseases/physiopathology , Age of Onset , Cell Line , Child, Preschool , Cholesterol/metabolism , Consanguinity , Esterification , Fibroblasts , Gene Frequency/genetics , Genotype , Humans , Intracellular Signaling Peptides and Proteins , Israel , Niemann-Pick C1 Protein , Niemann-Pick Diseases/epidemiology , Niemann-Pick Diseases/metabolism , Phenotype
14.
15.
Genes Dev ; 15(16): 2060-8, 2001 Aug 15.
Article in English | MEDLINE | ID: mdl-11511538

ABSTRACT

Mating-type switching in Schizosaccharomyces pombe involves a strand-specific, alkali-labile imprint at the mat1 (mating-type) locus. The imprint is synthesized during replication in a swi1, swi3, and polymerase alpha (swi7) dependent manner and is dependent on mat1 being replicated in a specific direction. Here we show that the direction of replication at mat1 is controlled by a cis-acting polar terminator of replication (RTS1). Two-dimensional gel analysis of replication intermediates reveals that RTS1 only terminates replication forks moving in the centromere-distal direction. A genetic analysis shows that RTS1 optimizes the imprinting process. Transposing the RTS1 element to the distal side of mat1 abolishes imprinting of the native mat1 allele but restores imprinting of an otherwise unimprinted inverted mat1 allele. These data provide conclusive evidence for the "direction of replication model" that explains the asymmetrical switching pattern of S. pombe, and identify a DNA replication-arrest element implicated in a developmental process. Such elements could play a more general role during development and differentiation in higher eukaryotes by regulating the direction of DNA replication at key loci.


Subject(s)
DNA Replication/genetics , DNA, Bacterial/biosynthesis , Fungal Proteins/physiology , Genomic Imprinting/genetics , Repressor Proteins/physiology , Saccharomyces cerevisiae Proteins , Schizosaccharomyces/genetics , Transcription Factors , Base Sequence , Basic Helix-Loop-Helix Transcription Factors , DNA, Bacterial/analysis , Molecular Sequence Data , Terminator Regions, Genetic/genetics
16.
Eur Respir J ; 17(6): 1208-15, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11491166

ABSTRACT

The diagnosis of cystic fibrosis (CF) is based on characteristic clinical and laboratory findings. However, a subgroup of patients present with an atypical phenotype that comprises partial CF phenotype, borderline sweat tests and one or even no common cystic fibrosis transmembrane conductance regulator (CFTR) mutations. The aim of this study was to evaluate the role of nasal potential difference (PD) measurements in the diagnosis of CF patients with an atypical presentation and in a population of patients suspected to have CF. Nasal PD was measured in 162 patients from four different groups: patients with classical CF (n = 31), atypical phenotype (n = 11), controls (n = 50), and patients with questionable CF (n = 70). The parameter, or combination of nasal PD parameters was calculated in order to best discriminate all CF patients (including atypical CF) from the non-CF group. The patients with atypical CF disease had intermediate values of PD measurements between the CF and non-CF groups. The best discriminate model that assigned all atypical CF patients as CF used: e(response to chloride-free and isoproterenol/response to amiloride) with a cut-off >0.70 to predict a CF diagnosis. When this model was applied to the group of 70 patients with questionable CF, 24 patients had abnormal PD similar to the atypical CF group. These patients had higher levels of sweat chloride concentration and increased rate of CFTR mutations. Nasal potential difference is useful in diagnosis of patients with atypical cystic fibrosis. Taking into account both the sodium and chloride transport elements of the potential difference allows for better differentiation between atypical cystic fibrosis and noncystic fibrosis patients. This calculation may assist in the diagnostic work-up of patients whose diagnosis is questionable.


Subject(s)
Cystic Fibrosis/diagnosis , Membrane Potentials/physiology , Nasal Mucosa/physiopathology , Adolescent , Adult , Cystic Fibrosis/genetics , Cystic Fibrosis/physiopathology , Cystic Fibrosis Transmembrane Conductance Regulator/genetics , Female , Genotype , Humans , Male , Phenotype , Predictive Value of Tests , Reference Values
17.
J Bacteriol ; 183(15): 4614-25, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11443097

ABSTRACT

Five histone deacetylase genes (HDA1, RPD3, HOS1, HOS2, and HOS3) have been cloned from Candida albicans and characterized. Sequence analysis and comparison with 17 additional deacetylases resulted in a phylogenetic tree composed of three major groups. Transcription of the deacetylases HDA1 and RPD3 is down-regulated in the opaque phase of the white-opaque transition in strain WO-1. HOS3 is selectively transcribed as a 2.5-kb transcript in the white phase and as a less-abundant 2.3-kb transcript in the opaque phase. HDA1 and RPD3 were independently deleted in strain WO-1, and both switching between the white and opaque phases and the downstream regulation of phase-specific genes were analyzed. Deletion of HDA1 resulted in an increase in the frequency of switching from the white phase to the opaque phase, but had no effect on the frequency of switching from the opaque phase to the white phase. Deletion of RPD3 resulted in an increase in the frequency of switching in both directions. Deletion of HDA1 resulted in reduced white-phase-specific expression of the EFG1 3.2-kb transcript, but had no significant effect on white-phase-specific expression of WH11 or opaque-phase-specific expression of OP4, SAP1, and SAP3. Deletion of RPD3 resulted in reduced opaque-phase-specific expression of OP4, SAP1, and SAP3 and a slight reduction of white-phase-specific expression of WH11 and 3.2-kb EFG1. Deletion of neither HDA1 nor RPD3 affected the high level of white-phase expression and the low level of opaque-phase expression of the MADS box protein gene MCM1, which has been implicated in the regulation of opaque-phase-specific gene expression. In addition, there was no effect on the phase-regulated levels of expression of the other deacetylase genes. These results demonstrate that the two deacetylase genes HDA1 and RPD3 play distinct roles in the suppression of switching, that the two play distinct and selective roles in the regulation of phase-specific genes, and that the deacetylases are in turn regulated by switching.


Subject(s)
Fungal Proteins/physiology , Histone Deacetylases/physiology , Intracellular Signaling Peptides and Proteins , Nuclear Proteins , Plant Proteins , Repressor Proteins , Saccharomyces cerevisiae Proteins , Schizosaccharomyces pombe Proteins , Amino Acid Sequence , Candida albicans/genetics , Candida albicans/physiology , Carrier Proteins/genetics , Cloning, Molecular , DNA-Binding Proteins/genetics , Fungal Proteins/genetics , Gene Expression , Histone Deacetylases/genetics , Minichromosome Maintenance 1 Protein , Molecular Sequence Data , Mutagenesis , Sequence Homology, Amino Acid , Transcription Factors/genetics
18.
EMBO J ; 20(11): 2857-66, 2001 Jun 01.
Article in English | MEDLINE | ID: mdl-11387218

ABSTRACT

In the fission yeast Schizosaccharomyces pombe, transcriptional silencing at the mating-type region, centromeres and telomeres is epigenetically controlled, and results from the assembly of higher order chromatin structures. Chromatin proteins associated with these silenced loci are believed to serve as molecular bookmarks that help promote inheritance of the silenced state during cell division. Specifically, a chromodomain protein Swi6 is believed to be an important determinant of the epigenetic imprint. Here, we show that a mutation in DNA polymerase alpha (pol(alpha)) affects Swi6 localization at the mating-type region and causes a 45-fold increase in spontaneous transition from the silenced epigenetic state to the expressed state. We also demonstrate that pol(alpha) mutant cells are defective in Swi6 localization at centromeres and telomeres. Genetic analysis suggests that Polalpha and Swi6 are part of the same silencing pathway. Interestingly, we found that Swi6 directly binds to Pol(alpha) in vitro. Moreover, silencing-defective mutant Pol(alpha) displays reduced binding to Swi6 protein. This work indicates involvement of a DNA replication protein, Pol(alpha), in heterochromatin assembly and inheritance of epigenetic chromatin structures.


Subject(s)
DNA Polymerase I/genetics , DNA Polymerase I/metabolism , Fungal Proteins/chemistry , Fungal Proteins/metabolism , Gene Silencing , Saccharomyces cerevisiae Proteins , Schizosaccharomyces/genetics , Transcription Factors/chemistry , Transcription Factors/metabolism , Transcription, Genetic , Amino Acid Sequence , Animals , Chromatin/metabolism , Chromosomal Proteins, Non-Histone/metabolism , Conserved Sequence , DNA Polymerase I/chemistry , Gene Expression Regulation, Fungal , Humans , Molecular Sequence Data , Restriction Mapping , Schizosaccharomyces/enzymology , Sequence Alignment , Sequence Homology, Amino Acid
19.
Genetics ; 158(2): 919-24, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11404352

ABSTRACT

Most strains of Candida albicans undergo high frequency phenotypic switching. Strain WO-1 undergoes the white-opaque transition, which involves changes in colony and cellular morphology, gene expression, and virulence. We have hypothesized that the switch event involves heritable changes in chromatin structure. To test this hypothesis, we transiently exposed cells to the histone deacetylase inhibitor trichostatin-A (TSA). Treatment promoted a dramatic increase in the frequency of switching from white to opaque, but not opaque to white. Targeted deletion of HDA1, which encodes a deacetylase sensitive to TSA, had the same selective effect. These results support the model that the acetylation of histones plays a selective role in regulating the switching process.


Subject(s)
Candida albicans/genetics , Histone Deacetylase Inhibitors , Mutation , Antifungal Agents/pharmacology , Candida albicans/drug effects , Candida albicans/physiology , Cell Division/drug effects , Hydroxamic Acids/pharmacology , Phenotype , Up-Regulation
20.
J Biol Chem ; 276(30): 28233-41, 2001 Jul 27.
Article in English | MEDLINE | ID: mdl-11359777

ABSTRACT

Serine proteases are implicated in a variety of processes during neurogenesis, including cell migration, axon outgrowth, and synapse elimination. Tissue-type plasminogen activator and urokinase-type activator are expressed in the floor plate during embryonic development. F-spondin, a gene also expressed in the floor plate, encodes a secreted, extracellular matrix-attached protein that promotes outgrowth of commissural axons and inhibits outgrowth of motor axons. F-spondin is processed in vivo to yield an amino half protein that contains regions of homology to reelin and mindin, and a carboxyl half protein that contains either six or four thrombospondin type I repeats (TSRs). We have tested F-spondin to see whether it is subjected to processing by plasmin and to determine whether the processing modulates its biological activity. Plasmin cleaves F-spondin at its carboxyl terminus. By using nested deletion proteins and mutating potential plasmin cleavage sites, we have identified two cleavage sites, the first between the fifth and sixth TSRs, and the second at the fifth TSR. Analysis of the extracellular matrix (ECM) attachment properties of the TSRs revealed that the fifth and sixth TSRs bind to the ECM, but repeats 1-4 do not. Structural functional experiments revealed that two basic motives are required to elicit binding of TSR module to the ECM. We demonstrate further that plasmin releases the ECM-bound F-spondin protein.


Subject(s)
Extracellular Matrix/metabolism , Fibrinolysin/chemistry , Fibrinolysin/physiology , Growth Substances , Neural Cell Adhesion Molecules/chemistry , Neural Cell Adhesion Molecules/metabolism , Peptides , Amino Acid Sequence , Binding Sites , Cell Division , Cell Line , Cell Movement , DNA/metabolism , Dose-Response Relationship, Drug , Extracellular Matrix Proteins , Fibrinolysin/metabolism , Gene Deletion , Humans , Molecular Sequence Data , Mutation , Plasmids/metabolism , Protein Binding , Protein Structure, Tertiary , Reelin Protein , Sequence Homology, Amino Acid , Structure-Activity Relationship , Tissue Plasminogen Activator/metabolism , Transfection
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