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1.
Transl Vis Sci Technol ; 12(2): 1, 2023 02 01.
Article in English | MEDLINE | ID: mdl-36723966

ABSTRACT

Purpose: This study assesses the repeatability of quantitative autofluorescence (qAF) in a multicenter setting and evaluates qAF as the end point for clinical trials in recessive Stargardt disease 1 (STGD1). Methods: A total of 102 patients with STGD1 underwent qAF imaging as part of the Stargardt Remofuscin Treatment Trial (STARTT; EudraCT No. 2018-001496-20). For 166 eyes, we obtained qAF imaging at 2 visits, with 2 recordings per visit. The qAF8 values were independently determined by the study site and a central reading center. Intra- and inter-visit reproducibility, as well as interobserver (study site versus reading center) reproducibility were obtained using intraclass correlation (ICC), one-sample t-test, and Bland-Altman coefficient of repeatability. Results: The qAF repeatability was ± 26.1% for intra-visit, ± 40.5% for inter-visit, and ± 20.2% for the interobserver reproducibility measures. Intra-visit repeatability was good to excellent for all sites (ICC of 0.88-0.96). Variability between visits was higher with an overall ICC of 0.76 (0.69-0.81). We observed no significant difference in qAF values across sites between visits (7.06 ± 93.33, P = 0.238). Conclusions: Real-life test-retest variability of qAF is higher in this set of data than previously reported in single center settings. With improved operator training and by selecting the better of two recordings for evaluation, qAF serves as a useful method for assessing changes in autofluorescence signal. Translational Relevance: The qAF can be adopted as a clinical trial end point, but steps to counterbalance variability should be considered.


Subject(s)
Optical Imaging , Retinal Pigment Epithelium , Humans , Stargardt Disease , Fundus Oculi , Ophthalmoscopy/methods , Reproducibility of Results
2.
Open Res Eur ; 1: 96, 2021.
Article in English | MEDLINE | ID: mdl-37645124

ABSTRACT

Background: This report describes the study design and baseline characteristics of patients with Stargardt disease (STGD1) enrolled in the STArgardt Remofuscin Treatment Trial (STARTT). Methods: In total, 87 patients with genetically confirmed STGD1 were randomized in a double-masked, placebo-controlled proof of concept trial to evaluate the safety and efficacy of 20 milligram oral remofuscin for 24 months. The primary outcome measure is change in mean quantitative autofluorescence value of an 8-segment ring centred on the fovea (qAF 8). Secondary efficacy variables are best corrected visual acuity (BCVA), low-luminance visual acuity (LLVA), mesopic microperimetry (mMP),  spectral domain optical coherence tomography (SD-OCT), reading speed on Radner reading charts, and patient-reported visual function as assessed by the National Eye Institute Visual Functioning Questionnaire 25 (NEI VFQ-25) and Functional Reading Independence (FRI) Index. Results: Mean age of participants was 35±11 years with 49 (56%) female. Median qAF 8 value was 438 Units (range 210-729). Median BCVA and LLVA in decimal units were 0.50 (range 0.13-0.80) and 0.20 (range 0.06-0.63), respectively. The median of the mean retinal sensitivity with mMP was 20.4 dB (range 0.0-28.8). SD-OCT showed median central subfield retinal thickness of 142 µm (range 72-265) and median macular volume of 1.65 mm 3 (range 1.13-2.19). Compared to persons without vision impairment, both reading performance and patient-reported visual function were significantly lower (p<0.001, one sample t-test). Mean reading speed was 108±39 words/minute with logRAD-score of 0.45±0.28. Mean VFQ-25 composite score was 72±13. Mean FRI Index score 2.8±0.6. Conclusions: This trial design may serve as reference for future clinical trials as it explores the utility of qAF 8 as primary outcome measure. The baseline data represent the largest, multi-national, STGD1 cohort to date that underwent standardized qAF imaging, reading speed assessment and vision-related quality of life measures which all contribute to the characterization of STGD1. EudraCT registration: 2018-001496-20 (09/05/2019).

3.
PLoS One ; 13(12): e0208641, 2018.
Article in English | MEDLINE | ID: mdl-30543669

ABSTRACT

The SRP-Sec61 targeting/translocation pathway of eukaryotic cells targets nascent protein chains to the membrane of the endoplasmic reticulum. Using this machinery, secretory proteins are translocated across this membrane whereas membrane proteins are integrated into the lipid bilayer. One of the key players of the pathway is the protein-conducting Sec61 (translocon) complex of the endoplasmic reticulum. The Sec61 complex has no enzymatic activity, is expressed only intracellularly and is difficult to purify and to reconstitute. Screening for small molecule inhibitors impairing its functions is thus notoriously difficult. Such inhibitors may not only be valuable tools for cell biology, they may also represent novel anti-tumor drugs. Here we have developed a two-step, sequential screening assay for inhibitors of the whole SRP-Sec61 targeting/translocation pathway which might include molecules affecting Sec61 complex functions. The resulting hit compounds were analyzed using a whole cell biosynthesis assay and a cell free transcription/translation/translocation assay. Using this methodology, we identified novel compounds inhibiting this pathway. Following structure-based back screening, one of these substances was analyzed in more detail and we could show that it indeed impairs translocation at the level of the Sec61 complex. A slightly modified methodology may be used in the future to screen for substances affecting SecYEG, the bacterial ortholog of the Sec61 complex in order to derive novel antibiotic drugs.


Subject(s)
High-Throughput Screening Assays/methods , SEC Translocation Channels/metabolism , Cell-Free System , Endoplasmic Reticulum/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , HEK293 Cells , Humans , Inhibitory Concentration 50 , Pyrazoles/chemistry , Pyrazoles/metabolism , Pyrimidines/chemistry , Pyrimidines/metabolism , SEC Translocation Channels/antagonists & inhibitors , SEC Translocation Channels/genetics
4.
Prog Mol Biol Transl Sci ; 132: 267-87, 2015.
Article in English | MEDLINE | ID: mdl-26055063

ABSTRACT

Signal sequences play a key role during the first steps of the intracellular transport of G protein-coupled receptors (GPCRs). They are involved in targeting of the nascent chains to the membrane of the endoplasmic reticulum (ER) and initiate integration of the newly synthesized receptors into this compartment. Two classes of signal sequences are known: N-terminal signal peptides, which are usually cleaved-off following ER insertion and internal signal sequences, the so-called signal anchor sequences, which form part of the mature proteins. About 5-10% of the GPCRs contain N-terminal signal peptides; the vast majority possesses signal anchor sequences. The reason why only a subset of GPCRs require signal peptides for ER targeting/insertion was addressed in the past decade by a limited number of studies indicating that the presence of signal peptides facilitates N-tail translocation at the ER membrane. Interestingly, recent work showed that signal peptides of GPCRs do not only serve "classical" functions in the early secretory pathway. Uncleaved pseudo signal peptides may regulate receptor densities in the plasma membrane, receptor dimerization, and G protein coupling selectivity. On the other hand, even cleaved and released peptides may have post-ER functions. In this review, we summarize the current knowledge about cleavable signal peptides of GPCRs and address also the question whether these sequences may serve as future drug targets in pharmacology.


Subject(s)
Protein Sorting Signals/physiology , Receptors, G-Protein-Coupled/biosynthesis , Receptors, G-Protein-Coupled/metabolism , Signal Transduction , Animals , Cell Membrane/metabolism , Cytosol/metabolism , Endoplasmic Reticulum/metabolism , Glycosylation , Humans , Protein Binding , Protein Structure, Tertiary , Protein Transport , Ribosomes/chemistry
5.
PLoS One ; 10(3): e0120886, 2015.
Article in English | MEDLINE | ID: mdl-25806945

ABSTRACT

The cyclodepsipeptide cotransin was described to inhibit the biosynthesis of a small subset of proteins by a signal sequence-discriminatory mechanism at the Sec61 protein-conducting channel. However, it was not clear how selective cotransin is, i.e. how many proteins are sensitive. Moreover, a consensus motif in signal sequences mediating cotransin sensitivity has yet not been described. To address these questions, we performed a proteomic study using cotransin-treated human hepatocellular carcinoma cells and the stable isotope labelling by amino acids in cell culture technique in combination with quantitative mass spectrometry. We used a saturating concentration of cotransin (30 micromolar) to identify also less-sensitive proteins and to discriminate the latter from completely resistant proteins. We found that the biosynthesis of almost all secreted proteins was cotransin-sensitive under these conditions. In contrast, biosynthesis of the majority of the integral membrane proteins was cotransin-resistant. Cotransin sensitivity of signal sequences was neither related to their length nor to their hydrophobicity. Instead, in the case of signal anchor sequences, we identified for the first time a conformational consensus motif mediating cotransin sensitivity.


Subject(s)
Peptides, Cyclic/analysis , Proteomics , Amino Acid Sequence , Aquaporin 2/genetics , Aquaporin 2/metabolism , Carbon Isotopes/chemistry , Chromatography, High Pressure Liquid , HEK293 Cells , Hep G2 Cells , Humans , Isotope Labeling , Microscopy, Confocal , Molecular Sequence Data , Mutagenesis, Site-Directed , Nitrogen Isotopes/chemistry , Peptides, Cyclic/chemistry , Peptides, Cyclic/metabolism , Protein Structure, Secondary , Protein Structure, Tertiary , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Sequence Alignment , Tandem Mass Spectrometry
6.
Sports Health ; 6(5): 427-33, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25177420

ABSTRACT

CONTEXT: Postural stability assessment is included as part of the diagnostic and monitoring process for sports-related concussions. Particularly, the relatively simple Balance Error Scoring System (BESS) and more sophisticated force plate measures like the Sensory Organization Test (SOT) are suggested. EVIDENCE ACQUISITION: RELEVANT STUDIES WERE IDENTIFIED VIA THE FOLLOWING ELECTRONIC DATABASES: PubMed, MEDLINE, EMBASE, Web of Science, ScienceDirect, and CINAHL (1980 to July 2013). Inclusion was based on the evaluation of postural sway or balance in concussed athletes of any age or sex and investigating the reliability or validity of the included tests. STUDY DESIGN: Clinical review. LEVEL OF EVIDENCE: Level 4. RESULTS: Both the SOT and the BESS show moderate reliability, but a learning effect due to repetitive testing needs to be considered. Both tests indicate that postural stability returns to baseline by day 3 to 5 in most concussed athletes. While the BESS is a simple and valid method, it is sensitive to subjectivity in scoring and the learning effect. The SOT is very sensitive to even subtle changes in postural sway, and thus, more accurate than the BESS; however, it is a rather expensive method of balance testing. CONCLUSION: Both tests serve the purpose of monitoring balance performance in the concussed athlete; however, neither may serve as a stand-alone diagnostic or monitoring tool. STRENGTH OF RECOMMENDATION TAXONOMY: B.

7.
Br J Sports Med ; 48(2): 102-6, 2014 Jan.
Article in English | MEDLINE | ID: mdl-23645831

ABSTRACT

BACKGROUND: The fast, random nature and characteristics of ice hockey make injury prevention a challenge as high-velocity impacts with players, sticks and boards occur and may result in a variety of injuries, including concussion. METHODS: Five online databases (January 1970 and May 2012) were systematically searched followed by a manual search of retrieved papers. RESULTS: Seventeen studies met the inclusion criteria. The heterogeneous diagnostic procedures and criteria for concussion prevented a pooling of data. When comparing the injury data of European and North American or Canadian leagues, the latter show a higher percentage of concussions in relation to the overall number of injuries (2-7% compared with 5.3-18.6%). The incidence ranged from 0.2/1000 to 6.5/1000 game-hours, 0.72/1000 to 1.81/1000 athlete-exposures and was estimated at 0.1/1000 practice-hours. DISCUSSION AND CONCLUSIONS: The included studies indicate a high incidence of concussion in professional and collegiate ice hockey. Despite all efforts there is no conclusive evidence that rule changes or other measures lead to a decrease in the actual incidence of concussions over the last few decades. This review supports the need for standardisation of the diagnostic criteria and reporting protocols for concussion to allow interstudy comparisons in the future.


Subject(s)
Brain Concussion/epidemiology , Hockey/injuries , Athletic Injuries/epidemiology , Canada/epidemiology , Data Collection , Europe/epidemiology , Hockey/legislation & jurisprudence , Humans , Incidence
8.
Health Phys ; 99(4): 577-80, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20838102

ABSTRACT

Biokinetic models for the assessment of individual internal doses represent the physiological processes of a standardized human, which affect the internal distribution of the radionuclide of interest. The flow from one compartment into another is specified by transfer rates, which may vary from person to person. The rate constants are then representing the mean values for the population as a whole, around which individual parameters fluctuate according to given probability densities. Analytical distribution propagation can be calculated only for very simple models. The influence of inter-individual variation can be studied with Monte Carlo simulations, which compare the simulated compartment content distributions using different initial distributions for the parameters. The simulations indicate that the form of test distributions affect the distributions of compartment contents only for very simple models in the early stages. Later on, the distributions converge to a lognormal shape. The coefficients of variation of the initial distributions can be adjusted so that the resulting distributions resemble each other. Due to the lack of significant differences, lognormal distributions--which are found in most measurable body parameters--were used for further studies. The range of inter-subject variability can be estimated by comparing data generated with Monte Carlo simulations with observed data. For the plutonium model, data retrieved long times post intake are most suitable for this purpose when the redistribution of the radionuclide in the compartments is in a state of quasi-equilibrium and the ratio of plutonium in different compartments is nearly constant. For the estimation of inter-individual variability, the ratios of the main excretion paths and the organs of main burden can be used. The comparison of observed and simulated standard deviations indicates a value of 0.6 for the coefficient of variation for all transfer rates. The generated distributions show good agreement with the available data and thus confirm that the simulations can represent the inter-individual variation in the biokinetic plutonium model.


Subject(s)
Environmental Exposure/analysis , Models, Biological , Plutonium/pharmacokinetics , Radiation Dosage , Biological Assay , Computer Simulation , Humans , Monte Carlo Method , Probability , Risk Assessment
9.
J Neurol ; 253 Suppl 4: IV29-31, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16944354

ABSTRACT

Insidious onset of mild, unspecific, sensitive, vegetative, psychopathological, cognitive and perceptive disturbances, i. e., visual and olfactory dysfunction, with a resulting change of personal behavior, i. e., reduced stress tolerance, precede the initially intermittently occurring motor symptoms in patients with Parkinson's disease (PD). Novel neuropathological findings suggest an expansion pattern of the neurodegenerative process beyond the nigral dopaminergic neurons with the initial event located outside the brain. This underlines the clinical concept of an initial premotor phase, which starts in nondopaminergic areas in PD. Moreover a more global general understanding of chronic neurodegeneration enables the performance of clinical trials on neuroprotection, since there is increasing evidence that diagnosis of PD at the threshold of onset of motor symptoms or cognitive symptoms in Alzheimer's disease is too late. Such an earlier diagnosis of chronic neurodegeneration will allow a more convincing demonstration of the efficacy of a neuroprotective or disease modifying compound. It will also support the concept of a clinically effective pharmacological intervention on a disease process, which is also more and more demanded by the health authorities for drug approval.


Subject(s)
Parkinson Disease/diagnosis , Parkinson Disease/physiopathology , Antiparkinson Agents/therapeutic use , Brain/pathology , Cognition Disorders , Depression , Humans , Levodopa/therapeutic use , Parkinson Disease/drug therapy , Parkinson Disease/psychology , Perceptual Disorders
10.
Nephrol Dial Transplant ; 21(2): 383-8, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16204288

ABSTRACT

BACKGROUND: It has been hypothesized that in renal failure, exogenous glycation compounds from food accumulate and play a major pathogenetic role when renal excretion is impaired. METHODS: To address this, a diet containing a defined amount of the lysine Amadori product (AP) lactuloselysine was used. Plasma concentrations and cumulative urinary excretion of AP were assessed in 16 healthy subjects, 12 renal failure patients and 6 continuous ambulatory peitoneal dialysis (CAPD) patients. Amadori product was measured as furosine using reverse phase high performance liquid chromatography (RP-HPLC) after acid hydrolysis. RESULTS: A diet low in glycation compounds significantly decreased excretion of APs in healthy subjects. In healthy individuals, ingestion of lactuloselysine bound to food proteins caused only a minor acute increase (8.24+/-1.11 mg/day, 2% of the administered dose) of AP excretion in the urine; in patients with renal failure not yet on dialysis, the increase in AP excretion in the urine was significantly less (4.0+/-0.51 mg/day) and the same was true in CAPD patients (0.21+/-0.09 mg/day). The plasma concentration of total APs, i.e. the sum of APs as free amino acids and residues bound to plasma proteins, did not change in any of the three groups, however. CONCLUSION: Dietary APs do not accumulate in the blood even in advanced renal failure. The amount of APs measured as furosine excreted in the urine is significantly less, however, in renal failure and CAPD patients compared with healthy subjects. Although the findings exclude accumulation of lactuloselysine in renal failure, they do not generally exclude accumulation of other food-derived advanced glycation end products (AGEs).


Subject(s)
Lactulose/analogs & derivatives , Renal Insufficiency/blood , Uremia/blood , Administration, Oral , Glycosylation , Humans , Lactulose/administration & dosage , Lactulose/blood , Lactulose/metabolism , Peritoneal Dialysis, Continuous Ambulatory , Renal Insufficiency/complications , Renal Insufficiency/metabolism , Renal Insufficiency/therapy , Uremia/etiology , Uremia/metabolism
11.
Infect Control Hosp Epidemiol ; 26(8): 726-31, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16156331

ABSTRACT

OBJECTIVE: To assess data on the epidemiology of nosocomial infection (NI) among neurologic intensive care patients. DESIGN: Prospective periodic surveillance study. SETTING: An 8-bed neurologic intensive care unit (ICU). PATIENTS: All those admitted for more than 24 hours during five 3-month periods between January 1999 and March 2003. METHODS: Standardized surveillance within the German infection surveillance system. RESULTS: Three hundred thirty-eight patients with a total of 2,867 patient-days and a mean length of stay of 8.5 days were enrolled during the 15-month study period. A total of 71 NIs were identified among 52 patients. Urinary tract infections (UTIs) were the most frequent NI (36.6%), followed by pneumonia (29.6%) and bloodstream infections (BSIs) (15.5%). The overall incidence and incidence density of NIs were 21.0 per 100 patients and 24.8 per 1,000 patient-days, respectively. Incidence densities were 9.8 UTIs per 1,000 urinary catheter-days (CI95, 6.4-14.4), 5.6 BSIs per 1,000 central venous catheter-days (CI9s, 2.8-10.0), and 12.8 cases of pneumonia per 1,000 ventilation-days (Cl95, 8.0-19.7). Device-associated UTI and pneumonia rates were in the upper range of national and international reference data for medical ICUs, despite the intensive infection control and prevention program in operation in the hospital. CONCLUSION: Neurologic intensive care patients have relatively high rates of device-associated nosocomial pneumonia and UTI. For a valid comparison of surveillance data and implementation of targeted prevention strategies, we would strongly recommend provision of national benchmarks for the neurologic ICU setting.


Subject(s)
Cross Infection/epidemiology , Intensive Care Units , Neurosurgery , Sentinel Surveillance , Germany/epidemiology , Hospitals, University , Humans , Prospective Studies , Surgical Instruments/microbiology
13.
J Mol Microbiol Biotechnol ; 4(3): 323-9, 2002 May.
Article in English | MEDLINE | ID: mdl-11931565

ABSTRACT

Microorganisms use a number of small basic proteins for organization and compaction of their DNA. By their interaction with the genome, these proteins do have a profound effect on gene expression, growth behavior, and viability. It has to be distinguished between indirect effects as a consequence of the state of chromosome condensation and relaxation that influence the rate of RNA polymerase action as represented by the histone-like proteins, and direct effects by specific binding of proteins to defined DNA segments predominantly located around promoter sequences. This latter class is represented by the transition-state regulators that are involved in integrating various global stimuli and orchestrating expression of the genes under their regulation for a better adaptation to changes in growth rate. In this article we will focus on two different but abundant DNA binding proteins of the gram-positive model organism Bacillus subtilis, the histone-like HBsu as a member of the unspecific and the transition state regulator AbrB as a member of specific classes of DNA binding proteins.


Subject(s)
Bacillus subtilis/metabolism , Bacterial Proteins , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , Gene Expression Regulation, Bacterial , Transcription Factors/chemistry , Transcription Factors/metabolism , Amino Acid Sequence , Bacillus subtilis/genetics , DNA, Bacterial/metabolism , DNA-Binding Proteins/genetics , Models, Molecular , Molecular Sequence Data , Structure-Activity Relationship , Transcription Factors/genetics
14.
J Neurol ; 249 Suppl 3: III/40-8, 2002 Oct.
Article in English | MEDLINE | ID: mdl-12522572

ABSTRACT

In idiopathic Parkinson's disease (IPD) approximately 60 % of the nigrostriatal neurons of the substantia nigra (SN) are degenerated before neurologists can establish the diagnosis according to the widely accepted clinical diagnostic criteria. It is conceivable that neuroprotective therapy starting at such an 'advanced stage' of the disease will fail to stop the degenerative process. Therefore, the identification of patients at risk and at earlier stages of the disease appears to be essential for any successful neuroprotection. The discovery of several genetic mutations associated with IPD raises the possibility that these, or other biomarkers, of the disease may help to identify persons at risk of IPD. Transcranial ultrasound have shown susceptibility factors for IPD related to an increased iron load of the substantia nigra. In the early clinical phase, a number of motor and particularly non-motor signs emerge, which can be identified by the patients and physicians years before the diagnosis is made, notably olfactory dysfunction, depression, or 'soft' motor signs such as changes in handwriting, speech or reduced ambulatory arm motion. These signs of the early, prediagnostic phase of IPD can be detected by inexpensive and easy-to-administer tests. As one single instrument will not be sensitive enough, a battery of tests has to be composed measuring independent parameters of the incipient disease. Subjects with abnormal findings in this test battery should than be submitted to nuclear medicine examinations to quantify the extent of dopaminergic injury and to reach the goal of a reliable, early diagnosis.


Subject(s)
Mood Disorders/etiology , Movement Disorders/etiology , Olfaction Disorders/etiology , Parkinson Disease/diagnosis , Peripheral Nervous System Diseases/etiology , 3-Iodobenzylguanidine , Affect , Biomarkers/analysis , Handwriting , Heart/innervation , Humans , Iron/metabolism , Mood Disorders/diagnosis , Movement Disorders/diagnosis , Mutation , Olfaction Disorders/diagnosis , Parkinson Disease/complications , Parkinson Disease/diagnostic imaging , Parkinson Disease/physiopathology , Peripheral Nervous System Diseases/diagnosis , Psychomotor Performance , Radiopharmaceuticals , Risk Assessment , Risk Factors , Speech , Substantia Nigra/diagnostic imaging , Tomography, Emission-Computed , Tomography, Emission-Computed, Single-Photon , Ultrasonography , Vision, Ocular
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