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1.
Integr Biol (Camb) ; 9(3): 238-247, 2017 03 01.
Article in English | MEDLINE | ID: mdl-28164205

ABSTRACT

Adaptive immune cells, such as T cells, integrate information from their extracellular environment through complex signaling networks with exquisite sensitivity in order to direct decisions on proliferation, apoptosis, and cytokine production. These signaling networks are reliant on the interplay between finely tuned secondary messengers, such as Ca2+ and H2O2. Frequency response analysis, originally developed in control engineering, is a tool used for discerning complex networks. This analytical technique has been shown to be useful for understanding biological systems and facilitates identification of the dominant behaviour of the system. We probed intracellular Ca2+ dynamics in the frequency domain to investigate the complex relationship between two second messenger signaling molecules, H2O2 and Ca2+, during T cell activation with single cell resolution. Single-cell analysis provides a unique platform for interrogating and monitoring cellular processes of interest. We utilized a previously developed microfluidic device to monitor individual T cells through time while applying a dynamic input to reveal a natural frequency of the system at approximately 2.78 mHz stimulation. Although our network was much larger with more unknown connections than previous applications, we are able to derive features from our data, observe forced oscillations associated with specific amplitudes and frequencies of stimuli, and arrive at conclusions about potential transfer function fits as well as the underlying population dynamics.


Subject(s)
Calcium Signaling/immunology , Calcium/immunology , Hydrogen Peroxide/immunology , Lab-On-A-Chip Devices , Models, Biological , T-Lymphocytes/immunology , Biological Clocks/drug effects , Biological Clocks/immunology , Cell Separation/instrumentation , Computer Simulation , Equipment Design , Flow Injection Analysis/instrumentation , Humans , Hydrogen Peroxide/administration & dosage , Jurkat Cells , Oscillometry/methods , Systems Integration , T-Lymphocytes/drug effects
2.
PLoS One ; 11(8): e0159248, 2016.
Article in English | MEDLINE | ID: mdl-27526200

ABSTRACT

T cells reach a state of replicative senescence characterized by a decreased ability to proliferate and respond to foreign antigens. Calcium release associated with TCR engagement is widely used as a surrogate measure of T cell response. Using an ex vivo culture model that partially replicates features of organismal aging, we observe that while the amplitude of Ca2+ signaling does not change with time in culture, older T cells exhibit faster Ca2+ rise and a faster decay. Gene expression analysis of Ca2+ channels and pumps expressed in T cells by RT-qPCR identified overexpression of the plasma membrane CRAC channel subunit ORAI1 and PMCA in older T cells. To test whether overexpression of the plasma membrane Ca2+ channel is sufficient to explain the kinetic information, we adapted a previously published computational model by Maurya and Subramaniam to include additional details on the store-operated calcium entry (SOCE) process to recapitulate Ca2+ dynamics after T cell receptor stimulation. Simulations demonstrated that upregulation of ORAI1 and PMCA channels is not sufficient to explain the observed alterations in Ca2+ signaling. Instead, modeling analysis identified kinetic parameters associated with the IP3R and STIM1 channels as potential causes for alterations in Ca2+ dynamics associated with the long term ex vivo culturing protocol. Due to these proteins having known cysteine residues susceptible to oxidation, we subsequently investigated and observed transcriptional remodeling of metabolic enzymes, a shift to more oxidized redox couples, and post-translational thiol oxidation of STIM1. The model-directed findings from this study highlight changes in the cellular redox environment that may ultimately lead to altered T cell calcium dynamics during immunosenescence or organismal aging.


Subject(s)
CD8-Positive T-Lymphocytes/cytology , CD8-Positive T-Lymphocytes/metabolism , Calcium/metabolism , Adult , Aging/metabolism , Biological Transport , Calcium Signaling , Cell Membrane/metabolism , Cytoplasm/metabolism , Gene Expression Regulation , Humans , Jurkat Cells , Models, Biological , Oxidation-Reduction , Protein Processing, Post-Translational , RNA, Messenger/genetics , RNA, Messenger/metabolism , Stromal Interaction Molecule 1/metabolism , Sulfhydryl Compounds/metabolism , Young Adult
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