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1.
Zootaxa ; 4394(2): 270-278, 2018 Mar 13.
Article in English | MEDLINE | ID: mdl-29690376

ABSTRACT

Predatory mites from the Amblyseius (Neoseiulus) genus (Family Phytoseiidae, Order Parasitiformes) are widely used for protecting plants against pests, especially thrips. The differentiation of Amblyseius and Neoseiulus species by their morphological features is problematic despite the fact that they are taxonomically different genera. The Phytoseiidae family includes a lot of species that are extremely difficult to distinguish from each other. The discovery of new molecular genetic markers might considerably facilitate the express identification of commercial mite species. Despite their high morphological similarity, the three common commercial Amblyseius and Neoseiulus mite species (Neoseiulus cucumeris, Amblyseius swirskii, and Neoseiulus barkeri) differed significantly in the nucleotide sequences of DNA fragments containing the ITS1 and ITS2 internal transcribed spacers. We found that when PCR products of the amplified DNA fragments from A. swirskii, N. cucumeris, and N. barkeri were treated with a combination of AccB1I, AspLEI, and SspI endonucleases and the resulting products were separated by electrophoresis in agarose gel, the obtained picture was sufficiently specific to provide accurate identification of the analyzed mite species. The lengths of the digestion products were different enough to allow their resolution in agarose gels. The PCR-RFLP method developed by us allows the rapid and accurate identification of commercially used Amblyseius and Neoseiulus species without DNA sequencing. The combination of the three endonucleases (AccB1I, AspLEI, and SspI) and FaeI can be used for the differentiation of all other but less frequently commercially used Phytoseiidae mites.


Subject(s)
Mites , Animals , Pest Control, Biological , Plants , Predatory Behavior , Thysanoptera
2.
J Ind Microbiol Biotechnol ; 44(8): 1177-1190, 2017 08.
Article in English | MEDLINE | ID: mdl-28444480

ABSTRACT

The non-conventional yeast Kluyveromyces marxianus is an emerging industrial producer for many biotechnological processes. Here, we show the application of a biomass-linked stoichiometric model of central metabolism that is experimentally validated, and mass and charge balanced for assessing the carbon conversion efficiency of wild type and modified K. marxianus. Pairs of substrates (lactose, glucose, inulin, xylose) and products (ethanol, acetate, lactate, glycerol, ethyl acetate, succinate, glutamate, phenylethanol and phenylalanine) are examined by various modelling and optimisation methods. Our model reveals the organism's potential for industrial application and metabolic engineering. Modelling results imply that the aeration regime can be used as a tool to optimise product yield and flux distribution in K. marxianus. Also rebalancing NADH and NADPH utilisation can be used to improve the efficiency of substrate conversion. Xylose is identified as a biotechnologically promising substrate for K. marxianus.


Subject(s)
Industrial Microbiology , Kluyveromyces/metabolism , Acetates/metabolism , Biomass , Calibration , Culture Media/chemistry , Ethanol/metabolism , Glucose/chemistry , Glutamic Acid/metabolism , Glycerol/metabolism , Inulin/chemistry , Kluyveromyces/genetics , Lactates/metabolism , Lactose/chemistry , Metabolic Engineering , Models, Molecular , Oxygen Consumption , Phenylalanine/metabolism , Phenylethyl Alcohol/metabolism , Reproducibility of Results , Succinic Acid/metabolism , Xylose/chemistry
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