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1.
FEBS Lett ; 592(13): 2248-2258, 2018 07.
Article in English | MEDLINE | ID: mdl-29862510

ABSTRACT

To date the only tRNAs containing nucleosides modified with a selenium (5-carboxymethylaminomethyl-2-selenouridine and 5-methylaminomethyl-2-selenouridine) have been found in bacteria. By using tRNA anticodon-stem-loop fragments containing S2U, Se2U, or geS2U, we found that in vitro tRNA 2-selenouridine synthase (SelU) converts S2U-RNA to Se2U-RNA in a two-step process involving S2U-RNA geranylation (with ppGe) and subsequent selenation of the resulting geS2U-RNA (with SePO33- ). No 'direct' S2U-RNA→Se2U-RNA replacement is observed in the presence of SelU/SePO33- only (without ppGe). These results suggest that the in vivo S2U→Se2U and S2U→geS2U transformations in tRNA, so far claimed to be the elementary reactions occurring independently in the same domain of the SelU enzyme, should be considered a combination of two consecutive events - geranylation (S2U→geS2U) and selenation (geS2U→Se2U).


Subject(s)
Escherichia coli/enzymology , Organoselenium Compounds/metabolism , Selenium/metabolism , Sulfurtransferases/physiology , Terpenes/metabolism , Uridine/analogs & derivatives , Binding Sites , Carbon/metabolism , Catalysis , Escherichia coli/genetics , Polyisoprenyl Phosphates/metabolism , Protein Processing, Post-Translational/genetics , RNA, Bacterial/chemistry , RNA, Bacterial/metabolism , RNA, Transfer/chemistry , RNA, Transfer/metabolism , Sulfurtransferases/genetics , Thiouridine/chemistry , Thiouridine/metabolism , Uridine/metabolism
2.
Langmuir ; 33(38): 9916-9925, 2017 09 26.
Article in English | MEDLINE | ID: mdl-28841326

ABSTRACT

An efficient method was developed enabling the synthesis of spheroidal polymer microparticles. Thorough physicochemical characteristics of the particles were acquired comprising the size, shape, electrophoretic mobility, and the diffusion coefficient. The particles were monodisperse, and their shape was well-fitted by prolate spheroids having the axis ratio equal to 4.17. Knowing the diffusion coefficient, their hydrodynamic diameter of 449 nm was calculated, which matched the value derived from Brenner's analytical expression. Particle deposition kinetics on mica and silicon/silica substrates, modified by poly(allylamine hydrochloride) (PAH) adsorption, was studied by optical microscopy and AFM imaging. The validity of the random sequential adsorption model was confirmed. Additionally, monolayers of the particles on these substrates were thoroughly characterized in situ by the streaming potential measurements for different ionic strengths. These measurements confirmed that the ζ potential change with the spheroidal particle coverage is less abrupt than for spheres and agrees with theoretical predictions. Exploiting these results, a useful analytical expression was derived that allows one to calculate the spheroidal particle coverage in situ via the streaming potential measurements. This expression, especially accurate for low coverage range, can be used for a quantitative interpretation of adsorption and desorption kinetics of anisotropic macromolecules, e.g., proteins on solid substrates.

3.
Biomed Mater ; 9(6): 065005, 2014 Oct 30.
Article in English | MEDLINE | ID: mdl-25358374

ABSTRACT

3D fine porous structures obtained by electrospinning a poly[(R,S)-3-hydroxybutyrate] (aPHB)/ poly[(R)-3-hydroxybutyrate] (PHB) (85/15 w/w) blend were successfully modified with human procollagen type I by simple immersion of the polyester scaffold in an aqueous solution of the protein. Effective modification of the scaffold with human procollagen I was confirmed by an immunodetection test, which revealed the presence of the procollagen type I as an outer layer even on inner structures of the porous matrixes. Biological tests of 3D fabrics made of the PHB blend provide support for the adhesion and proliferation of human fibroblasts, while their modification with procollagen type I increased the biocompatibility of the final scaffolds significantly, as shown by the notable increase in the number of attached cells during the early hours of their incubation. Based on these findings, human procollagen type I surface-modified aPHB/PHB scaffolds should be considered a promising material in regenerative medicine.


Subject(s)
Biocompatible Materials/chemistry , Collagen Type I/chemistry , Hydroxybutyrates/chemistry , Tissue Scaffolds/chemistry , Cell Adhesion , Cell Proliferation , Cells, Cultured , Fibroblasts/cytology , Fibroblasts/metabolism , Humans , Microscopy, Electron, Scanning , Peptides/chemistry , Polyesters/chemistry , Porosity , Prohibitins , Regeneration , Salts/chemistry , Spectroscopy, Fourier Transform Infrared , Surface Properties , Tissue Engineering/methods , Viscosity
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