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1.
Sci Rep ; 8(1): 2281, 2018 02 02.
Article in English | MEDLINE | ID: mdl-29396406

ABSTRACT

The scaffold protein DLGAP1 is localized at the post-synaptic density (PSD) of glutamatergic neurons and is a component of supramolecular protein complexes organized by PSD95. Gain-of-function variants of DLGAP1 have been associated with obsessive-compulsive disorder (OCD), while haploinsufficient variants have been linked to autism spectrum disorder (ASD) and schizophrenia in human genetic studies. We tested male and female Dlgap1 wild type (WT), heterozygous (HT), and knockout (KO) mice in a battery of behavioral tests: open field, dig, splash, prepulse inhibition, forced swim, nest building, social approach, and sucrose preference. We also used biochemical approaches to examine the role of DLGAP1 in the organization of PSD protein complexes. Dlgap1 KO mice were most notable for disruption of protein interactions in the PSD, and deficits in sociability. Other behavioral measures were largely unaffected. Our data suggest that Dlgap1 knockout leads to PSD disruption and reduced sociability, consistent with reports of DLGAP1 haploinsufficient variants in schizophrenia and ASD.


Subject(s)
Mice, Knockout , Neurons/pathology , Post-Synaptic Density/pathology , SAP90-PSD95 Associated Proteins/deficiency , Social Behavior , Animals , Behavior, Animal , Female , Male , Protein Binding
2.
Genes Brain Behav ; 16(4): 409-418, 2017 04.
Article in English | MEDLINE | ID: mdl-27886459

ABSTRACT

Behavioural analysis of mice carrying engineered mutations is widely used to identify roles of specific genes in components of the mammalian behavioural repertoire. The reproducibility and robustness of phenotypic measures has become a concern that undermines the use of mouse genetic models for translational studies. Contributing factors include low individual study power, non-standardized behavioural testing, failure to address confounds and differences in genetic background of mutant mice. We have examined the importance of these factors using a statistically robust approach applied to behavioural data obtained from three mouse mutations on 129S5 and C57BL/6J backgrounds generated in a standardized battery of five behavioural assays. The largest confounding effect was sampling variation, which partially masked the genetic background effect. Our observations suggest that strong interaction of mutation with genetic background in mice in innate and learned behaviours is not necessarily to be expected. We found composite measures of innate and learned behaviour were similarly impacted by mutations across backgrounds. We determined that, for frequently used group sizes, a single retest of a significant result conforming to the commonly used P < 0.05 threshold results in a reproducibility of 60% between identical experiments. Reproducibility was reduced in the presence of strain differences. We also identified a P-value threshold that maximized reproducibility of mutant phenotypes across strains. This study illustrates the value of standardized approaches for quantitative assessment of behavioural phenotypes and highlights approaches that may improve the translational value of mouse behavioural studies.


Subject(s)
Behavior, Animal/physiology , Mutation , Animals , Disease Models, Animal , Female , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Motor Activity/genetics , Phenotype , Reproducibility of Results , Social Behavior , Software
3.
Nat Commun ; 3: 900, 2012 Jun 12.
Article in English | MEDLINE | ID: mdl-22692543

ABSTRACT

Alternative promoter usage and alternative splicing enable diversification of the transcriptome. Here we demonstrate that the function of Synaptic GTPase-Activating Protein (SynGAP), a key synaptic protein, is determined by the combination of its amino-terminal sequence with its carboxy-terminal sequence. 5' rapid amplification of cDNA ends and primer extension show that different N-terminal protein sequences arise through alternative promoter usage that are regulated by synaptic activity and postnatal age. Heterogeneity in C-terminal protein sequence arises through alternative splicing. Overexpression of SynGAP α1 versus α2 C-termini-containing proteins in hippocampal neurons has opposing effects on synaptic strength, decreasing and increasing miniature excitatory synaptic currents amplitude/frequency, respectively. The magnitude of this C-terminal-dependent effect is modulated by the N-terminal peptide sequence. This is the first demonstration that activity-dependent alternative promoter usage can change the function of a synaptic protein at excitatory synapses. Furthermore, the direction and degree of synaptic modulation exerted by different protein isoforms from a single gene locus is dependent on the combination of differential promoter usage and alternative splicing.


Subject(s)
Protein Isoforms/metabolism , Synapses/metabolism , ras GTPase-Activating Proteins/metabolism , Amino Acid Sequence , Animals , Electrophysiology , Hippocampus/metabolism , Mass Spectrometry , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Neurons/enzymology , Protein Isoforms/chemistry , Protein Isoforms/genetics , ras GTPase-Activating Proteins/chemistry , ras GTPase-Activating Proteins/genetics
4.
Mol Psychiatry ; 17(2): 142-53, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22083728

ABSTRACT

A small number of rare, recurrent genomic copy number variants (CNVs) are known to substantially increase susceptibility to schizophrenia. As a consequence of the low fecundity in people with schizophrenia and other neurodevelopmental phenotypes to which these CNVs contribute, CNVs with large effects on risk are likely to be rapidly removed from the population by natural selection. Accordingly, such CNVs must frequently occur as recurrent de novo mutations. In a sample of 662 schizophrenia proband-parent trios, we found that rare de novo CNV mutations were significantly more frequent in cases (5.1% all cases, 5.5% family history negative) compared with 2.2% among 2623 controls, confirming the involvement of de novo CNVs in the pathogenesis of schizophrenia. Eight de novo CNVs occurred at four known schizophrenia loci (3q29, 15q11.2, 15q13.3 and 16p11.2). De novo CNVs of known pathogenic significance in other genomic disorders were also observed, including deletion at the TAR (thrombocytopenia absent radius) region on 1q21.1 and duplication at the WBS (Williams-Beuren syndrome) region at 7q11.23. Multiple de novos spanned genes encoding members of the DLG (discs large) family of membrane-associated guanylate kinases (MAGUKs) that are components of the postsynaptic density (PSD). Two de novos also affected EHMT1, a histone methyl transferase known to directly regulate DLG family members. Using a systems biology approach and merging novel CNV and proteomics data sets, systematic analysis of synaptic protein complexes showed that, compared with control CNVs, case de novos were significantly enriched for the PSD proteome (P=1.72 × 10⁻6. This was largely explained by enrichment for members of the N-methyl-D-aspartate receptor (NMDAR) (P=4.24 × 10⁻6) and neuronal activity-regulated cytoskeleton-associated protein (ARC) (P=3.78 × 10⁻8) postsynaptic signalling complexes. In an analysis of 18 492 subjects (7907 cases and 10 585 controls), case CNVs were enriched for members of the NMDAR complex (P=0.0015) but not ARC (P=0.14). Our data indicate that defects in NMDAR postsynaptic signalling and, possibly, ARC complexes, which are known to be important in synaptic plasticity and cognition, play a significant role in the pathogenesis of schizophrenia.


Subject(s)
DNA Copy Number Variations/genetics , Genetic Predisposition to Disease , Schizophrenia/genetics , Schizophrenia/pathology , Synapses/genetics , Synapses/pathology , AIDS-Related Complex/genetics , Bulgaria , Case-Control Studies , Family Health , Female , Gene Frequency , Genotype , Humans , Iceland , Japan , Male , Meta-Analysis as Topic , Microarray Analysis , Models, Biological , Post-Synaptic Density/genetics , Post-Synaptic Density/pathology , Psychiatric Status Rating Scales , Receptors, N-Methyl-D-Aspartate , Signal Transduction/genetics , Statistics, Nonparametric
5.
Ann Oncol ; 21(10): 2112-2118, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20332138

ABSTRACT

BACKGROUND: The objective of this study was to evaluate the age-based enrollment of cancer patients into registration trials of new drug applications or expanding the indications for use. MATERIALS AND METHODS: The data from 234 registration trials in Japan and overseas of 43 drugs, which were reviewed by the Pharmaceuticals and Medical Devices Agency and approved by the Ministry of Health, Labour and Welfare in Japan between 1999 and 2008, were retrospectively analyzed according to the age distribution of enrolled patients. The age distribution of the Japanese cancer population was derived from Cancer Statistics in Japan 2003 and Annual Report on Health, Labour and Welfare 2003-2004. RESULTS: In the Japanese cancer population, the estimated median age of cancer patients is 70 years, and 66% of cancer patients are aged 65 years or more. The estimated median age of cancer patients in all registration trials conducted in Japan was 59 years, whereas it was 55 years in the registration trials conducted overseas. The proportion of patients aged 65 years or more enrolled in registration trials conducted in Japan was 35%; this number was 28% in registration trials conducted overseas. CONCLUSION: Elderly patients are underrepresented in oncology registration trials in Japan.


Subject(s)
Antineoplastic Agents/therapeutic use , Clinical Trials as Topic/statistics & numerical data , Neoplasms/drug therapy , Patient Selection , Research Subjects , Age Factors , Aged , Female , Follow-Up Studies , Humans , International Agencies , Japan , Male , Middle Aged , Neoplasms/epidemiology , Neoplasms/pathology , Prognosis
6.
BMC Neurosci ; 7: 47, 2006 Jun 12.
Article in English | MEDLINE | ID: mdl-16768796

ABSTRACT

BACKGROUND: Genetically manipulated embryonic stem (ES) cell derived neurons (ESNs) provide a powerful system with which to study the consequences of gene manipulation in mature, synaptically connected neurons in vitro. Here we report a study of focal adhesion kinase (FAK), which has been implicated in synapse formation and regulation of ion channels, using the ESN system to circumvent the embryonic lethality of homozygous FAK mutant mice. RESULTS: Mouse ES cells carrying homozygous null mutations (FAK-/-) were generated and differentiated in vitro into neurons. FAK-/- ESNs extended axons and dendrites and formed morphologically and electrophysiologically intact synapses. A detailed study of NMDA receptor gated currents and voltage sensitive calcium currents revealed no difference in their magnitude, or modulation by tyrosine kinases. CONCLUSION: FAK does not have an obligatory role in neuronal differentiation, synapse formation or the expression of NMDA receptor or voltage-gated calcium currents under the conditions used in this study. The use of genetically modified ESNs has great potential for rapidly and effectively examining the consequences of neuronal gene manipulation and is complementary to mouse studies.


Subject(s)
Cell Differentiation/genetics , Focal Adhesion Protein-Tyrosine Kinases/genetics , Mutation/genetics , Neurons/physiology , Pluripotent Stem Cells/metabolism , Animals , Calcium Channels/genetics , Calcium Channels/metabolism , Calcium Signaling/genetics , Cell Differentiation/drug effects , Cell Membrane/drug effects , Cell Membrane/genetics , Cell Membrane/metabolism , Cells, Cultured , Enzyme Inhibitors/pharmacology , Genes, Lethal/genetics , Genistein/pharmacology , Homozygote , Ion Channels/genetics , Ion Channels/metabolism , Membrane Potentials/drug effects , Membrane Potentials/genetics , Mice , Mice, Knockout , Neurites/metabolism , Neurites/ultrastructure , Neurons/cytology , Neurons/metabolism , Patch-Clamp Techniques , Pluripotent Stem Cells/cytology , Pluripotent Stem Cells/drug effects , Receptors, N-Methyl-D-Aspartate/genetics , Receptors, N-Methyl-D-Aspartate/metabolism , Synapses/drug effects , Synapses/genetics , Synapses/metabolism , Synaptic Transmission/drug effects , Synaptic Transmission/genetics , src-Family Kinases/drug effects , src-Family Kinases/metabolism
14.
Jpn Circ J ; 64(11): 842-7, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11110428

ABSTRACT

The study examined the association between aortic wall volume (AWV) detected by enhanced computed tomography and coronary artery atherosclerosis observed on angiography. In 180 cases, AWV was measured as the total wall volume of a 7-cm portion of the descending thoracic aorta distal from the tracheal bifurcation. Coronary artery atherosclerosis was angiographically quantified by both Gensini score, in terms of the severity of coronary artery stenosis, and Extent score, in terms of the severity of coronary artery involvement. Mean AWV values between the patients with significant coronary artery stenosis and those without significant stenosis were 9.83+/-4.04 cm3 and 8.09+/-2.39 cm3, respectively (p<0.001). AWV was a significantly independent variable for significant coronary artery disease (p=0.0097) and an Extent score > or = 60 (p=0.0092). Calcification of AWV, however, was not associated with coronary atherosclerosis. The quantification of aortic atherosclerosis was useful for diagnosing coronary artery disease.


Subject(s)
Aorta, Thoracic/pathology , Aortic Diseases/pathology , Arteriosclerosis/pathology , Coronary Angiography , Coronary Artery Disease/pathology , Iopamidol/analogs & derivatives , Tomography, X-Ray Computed/methods , Aged , Alcohol Drinking/epidemiology , Aorta, Thoracic/diagnostic imaging , Aortic Diseases/diagnostic imaging , Aortic Diseases/epidemiology , Arteriosclerosis/diagnostic imaging , Arteriosclerosis/epidemiology , Comorbidity , Contrast Media , Coronary Artery Disease/diagnostic imaging , Coronary Artery Disease/epidemiology , Diabetes Mellitus/epidemiology , Female , Humans , Hyperlipidemias/epidemiology , Hypertension/epidemiology , Male , Middle Aged , Risk Factors , Severity of Illness Index
15.
Jpn Circ J ; 64(11): 883-5, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11110435

ABSTRACT

After placing a stent in the main vessel of a bifurcation lesion, it is sometimes necessary to perform further balloon inflation in order to treat an ostial lesion in a side branch. The stent struts may prevent full balloon expansion at the ostium of a side branch, resulting in residual ostial stenosis. The degree of completeness of balloon inflation may vary significantly depending on the stent design and structure. A model of a bifurcation lesion with an angle of 45 degrees was created from acrylic resin. The diameters of the main vessel and the side branch were both 3.5 mm. Deployment of the Palmaz-Schatz stent (n=5), NIR stent (n=5) or Multi-Link stent (n=5) was performed in the main vessel with a 3.5-mm balloon catheter inflated to 12 atm. A 3.5-mm balloon catheter was then inflated to 12 atm through the stent struts of the main vessel and into the ostium of the side branch. The degree of completeness of balloon inflation (% balloon expansion) was calculated as (smallest diameter of balloon catheter/reference diameter of balloon catheter) x 100%. The minimal lumen diameter (MLD) and cross-sectional area (CSA) at the ostium of the side branch created with the stent struts were also measured. Limited balloon expansion through the struts was observed with the Palmaz-Schatz stent and the NIR stent, but almost full balloon expansion was observed with the Multi-Link stent (% balloon expansion: Palmaz-Schatz stent 80%, NIR stent 60%, Multi-Link stent 94%, p<0.01). The MLD and CSA of the dilated struts, representing the ostium of the side branch, of the Palmaz-Schatz stent (2.2+/-0.1 mm, 4.5+/-0.3 mm2) and the NIR stent (1.8+/-0.1 mm, 3.1+/-0.3 mm2) were significantly smaller compared with those of the Multi-Link stent (3.0+/-0.2 mm, 8.4+/-0.6 mm2) (p<0.01). The struts of the Palmaz-Schatz stent and the NIR stent deployed in the main vessel of a bifurcation prevent full expansion of a balloon catheter inflated at the side branch ostium. In contrast, almost full balloon expansion through the struts of the Multi-Link stent is achieved.


Subject(s)
Catheterization , Stents , Coronary Disease/pathology , Coronary Disease/therapy , Equipment Design , Models, Anatomic
16.
Thromb Res ; 100(1): 61-72, 2000 Oct 01.
Article in English | MEDLINE | ID: mdl-11053618

ABSTRACT

To obtain better insight into the pathogenesis of verotoxin-producing Escherichia coli-associated diseases, in this study, we explored the effect of verotoxin 2 (VT2) on coagulation in an animal model. After being given VT2 (50 ng/kg, lethal dose), C57BL/6 mice showed progressively increasing expression of TF mRNA in the kidney and brain and elevated plasma levels of thrombin-antithrombin III complex (TAT), normotest, fibrinogen, and PAI-1 paralleling the disease course over 24 hours; platelet counts were decreased at 48 hours with hemorrhage in the kidney and brain. Co-administration of lipopolysaccharide (LPS, 0.5 mg/kg) with VT2 (50 ng/kg) exhibited more prominant and/or prolonged increase in not only expression of TF and PAI-1 mRNAs in the kidney and brain but also plasma levels of TAT, fibrinogen, and PAI-1 and was associated with more remarkable hemorrhage in the tissues. Although VT2 (5 ng/kg) was not a lethal dose, co-administration of LPS (0.5 mg/kg) with VT2 (5 ng/kg) enhanced the susceptibility to VT2, resulting in more prolonged elevation of TAT levels during the first 24 hours than that in the LPS group and a second elevation at 72 hours, followed by death. Plasma IL-1beta level reached a maximum at 24 hours after VT2 (50 ng/kg) injection prior to the increase in TAT levels, whereas the increase in TNFalpha level immediately after injection was associated with the increase in PAI-1 mRNA. These observations indicate that the activation of coagulation by VT2 may occur through a mechanism different from that used by LPS, since plasma TAT levels rose in the mice immediately after LPS injection and returned to normal over 36 hours.


Subject(s)
Blood Coagulation/drug effects , Lipopolysaccharides/pharmacology , Mice, Inbred C57BL/blood , Shiga Toxin 2/pharmacology , Animals , Antithrombin III/drug effects , Blood Coagulation Tests , Brain/drug effects , Brain/metabolism , Brain/pathology , Cytokines/blood , Cytokines/drug effects , Dose-Response Relationship, Drug , Drug Therapy, Combination , Fibrinogen/drug effects , Fibrinogen/metabolism , Hemorrhage/chemically induced , Hemorrhage/pathology , Intracranial Hemorrhages/chemically induced , Intracranial Hemorrhages/pathology , Kidney/drug effects , Kidney/metabolism , Kidney/pathology , Lipopolysaccharides/toxicity , Male , Mice , Models, Animal , Neutrophils/cytology , Peptide Hydrolases/drug effects , Plasminogen Activator Inhibitor 1/blood , Plasminogen Activator Inhibitor 1/genetics , Platelet Count , RNA, Messenger/metabolism , Shiga Toxin 2/toxicity , Shock/chemically induced , Thromboplastin/genetics , Time Factors , Tissue Distribution
17.
Am Heart J ; 140(4): 565-74, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11011329

ABSTRACT

BACKGROUND: Conventional gray-scale images of intravascular ultrasound (IVUS) cannot accurately differentiate histologic subtypes of sonolucent coronary plaques with or without a lipid core. METHODS: We analyzed radiofrequency signals obtained in vitro from 24 regions of interest (ROI) of noncalcified (sonolucent) plaques in 10 atherosclerotic coronary artery specimens pressure-fixed by formalin. Radiofrequency signals were sampled with a 30-MHz IVUS catheter and digitized at 500 MHz in 8-bit resolution. The ROIs were histologically categorized into 12 plaques with a lipid core and 12 plaques without it. Integrated backscatter and statistical parameters of the radiofrequency envelope (mean/SD ratio [MSR], skewness, and kurtosis) within the ROI were calculated offline, and their ability to detect a lipid core was compared with visual analysis of the IVUS video images. In the group with lipid cores, percent area of a lipid core in each ROI was measured in a digitized histologic image by a computerized planimeter. RESULTS: Sensitivity and specificity of MSR, skewness, and kurtosis for lipid core detection were substantially greater than visual video image analysis (83.3% and 91.7%, 100% and 91.7%, 100% and 91.7% vs 53.3% and 71.7%). Furthermore, the parameters of integrated backscatter, MSR, skewness, and kurtosis were significantly correlated to percent of core area (r = -0.64, -0.73, 0.78, and 0.63, respectively; P<.05). CONCLUSIONS: Compared with IVUS video images, the parameters of radiofrequency signal analysis may be used to aid in more accurate detection and quantitative evaluation of a lipid core, which is one of the major factors of a vulnerable coronary plaque.


Subject(s)
Coronary Artery Disease/diagnostic imaging , Coronary Vessels/diagnostic imaging , Ultrasonography, Interventional , Humans , Image Processing, Computer-Assisted , In Vitro Techniques , Sensitivity and Specificity , Severity of Illness Index , Video Recording
18.
Jpn Circ J ; 64(3): 161-4, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10732845

ABSTRACT

The present study evaluated the cost of coronary stenting compared with conventional balloon angioplasty in Japan. Procedural cost was estimated as the sum of the procedural fee and the cost of devices such as angioplasty balloon and stent. The data such as the number of balloon catheters and stents used, and the rate of crossovers that was shown by the Stent Restenosis Study (STRESS) were applied to calculate the costs of stenting and conventional balloon angioplasty. For the estimation of hospital room and nursing costs, the length of the in-hospital stay was estimated at 7 days. The costs of procedures such as laboratory and radiological tests were determined based on routine coronary intervention at Chiba University Hospital. The rates of target lesion revascularization in the STRESS trial (conventional balloon angioplasty: 21%, stenting: 15%) were used to calculate the cost during follow up. The in-hospital costs of conventional balloon angioplasty and stenting were estimated to be Yens 982,300 and Yens 1,416,893, respectively. The overall costs, including follow-up cost, of conventional balloon angioplasty and stenting were estimated to be Yens 1,188,583 and Yens 1,564,238, respectively. The in-hospital cost of stenting is higher compared with conventional balloon angioplasty because of greater balloon use and direct stent cost. Lower target lesion revascularization reduces the cost difference between conventional balloon angioplasty and stenting, but the higher initial cost of stenting is not fully offset.


Subject(s)
Angioplasty, Balloon/economics , Coronary Disease/economics , Stents/economics , Coronary Disease/therapy , Costs and Cost Analysis , Female , Humans , Male
19.
Circulation ; 100(21): 2127-30, 1999 Nov 23.
Article in English | MEDLINE | ID: mdl-10571969

ABSTRACT

BACKGROUND: Unprocessed ultrasound radiofrequency (RF) signal analysis has been shown to distinguish different tissue structures more reliably than gray-scale interpretation of conventional ultrasound images. METHODS AND RESULTS: The objective of this study was to test the feasibility of in vivo intravascular ultrasound (IVUS) RF signal analysis in an animal model of allograft rejection. Six cynomolgus monkeys underwent transplantation of 3-cm aortic allograft segments distal to the renal arteries from immunologically mismatched donors. IVUS imaging with a 30-MHz system was performed 84 to 105 days after the operation. RF signals were acquired from cross sections of the recipient and the allograft aortas in real time with a digitizer at 500 MHz with 8-bit resolution. Sixty-five cross sections and 68 regions of interest (31 in host aorta and 37 in allograft) were analyzed in the adventitial layer with a total number of 8568 vectors processed. For each region of interest, a weighted-average attenuation was calculated on the basis of the attenuation and length for each individual vector. Histological examination was performed at every cross section imaged by IVUS. When the gray-scale images of conventional IVUS scored by an independent observer were compared, no distinction between adventitia of the native aorta and allograft was possible. Analysis of the average RF backscatter power also showed no significant difference (70.32+/-3.55 versus 70.72+/-3.38 dB). However, the average attenuation of allografts was significantly lower than that of the host aortas (2.64+/-1.38 versus 4.02+/-1.16 dB/mm, P<0.001). Histology demonstrated a marked adventitial inflammatory response in all allografts, with no inflammation observed in the host aortas. CONCLUSIONS: In vivo IVUS tissue characterization can be performed during routine imaging. In this model of transplant vasculopathy, RF attenuation measurements were more sensitive than visual or quantitative gray-scale analysis.


Subject(s)
Aorta/transplantation , Graft Rejection/diagnostic imaging , Animals , Aorta/diagnostic imaging , Collagen/analysis , Macaca fascicularis , Radio Waves , Transplantation, Homologous , Ultrasonography
20.
Biochem Biophys Res Commun ; 263(1): 166-71, 1999 Sep 16.
Article in English | MEDLINE | ID: mdl-10486272

ABSTRACT

The second major allergen of Chamaecyparis obtusa (Japanese cypress) pollen, Cha o 2, has been purified and its cDNA cloned. Of patients with pollinosis caused by C. obtusa, 82.5% produce IgE antibodies which react with purified Cha o 2. The purified protein has a molecular mass of 46 kDa and its 12 N-terminal amino acid sequence displays a high homology with that of Cry j 2, the second major allergen of Cryptomeria japonica pollen. cDNA clones coding for Cha o 2 have been isolated using Cry j 2 cDNA as a probe. Cha o 2 cDNA clones were sequenced and found to code a putative 50-residue signal sequence and a 464-residue mature protein with a molecular weight of 50 kDa. Two possible N-linked glycosylation sites were found in the sequence. The deduced amino acid sequence of Cha o 2 shows 74.3% identity with that of Cry j 2. In its primary structure, Cha o 2 shows significant identity with those of the polygalacturonases of avocado, tomato, and maize as well as Cry j 2.


Subject(s)
Allergens/genetics , Allergens/isolation & purification , DNA, Complementary/genetics , Pollen/genetics , Pollen/immunology , Allergens/chemistry , Amino Acid Sequence , Antibody Specificity , Base Sequence , Case-Control Studies , Cloning, Molecular , DNA, Plant/genetics , Humans , Immunoglobulin E/blood , Molecular Sequence Data , Molecular Weight , Plant Proteins/genetics , Plant Proteins/immunology , Pollen/chemistry , Rhinitis, Allergic, Seasonal/immunology , Sequence Homology, Amino Acid , Trees
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