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1.
Dokl Biochem Biophys ; 480(1): 146-148, 2018 May.
Article in English | MEDLINE | ID: mdl-30008096

ABSTRACT

For the first time, with the aid of differential scanning calorimetry, the thermal denaturation of fibrinogen under induced oxidation was studied. All fibrinogen structural elements detected by DSC (D region, αC-domain, and E region) are subjected to oxidation. Structural changes in fibrinogen molecule were characterized by the denaturation temperature, denaturation enthalpy, and van't Hoff enthalpy.


Subject(s)
Fibrinogen/chemistry , Protein Processing, Post-Translational , Calorimetry, Differential Scanning/methods , Humans , Oxidation-Reduction , Protein Domains
2.
Dokl Biochem Biophys ; 474(1): 173-177, 2017 May.
Article in English | MEDLINE | ID: mdl-28726089

ABSTRACT

By using the mass-spectrometry method, the oxidative modifications of the fibrinogen Aα, Bß, and γ polypeptide chains induced by its oxidation have been studied. The αC-region has been proven to be the most vulnerable target for the oxidizer (ozone) as compared with the other structural elements of the Aα chain. The Bß chain mapping shows that the oxidative sites are localized within all the structural elements of the chain in which the ß-nodule exhibits high susceptibility to oxidation. The γ chains are the least vulnerable to the oxidizer action. The results obtained demonstrate convincingly that the self-assembly centers dealing with interactions of knob "A": hole "a" are not involved in oxidative modification. It is concluded that the numerous oxidative sites revealed are mainly responsible for inhibiting lateral aggregation of protofibrils. The part of amino acid residues subjected to oxidation is supposed to carry out the antioxidant function.


Subject(s)
Fibrinogen/chemistry , Peptide Fragments/metabolism , Fibrinogen/metabolism , Hydrolysis , Oxidation-Reduction
3.
Dokl Biochem Biophys ; 474(1): 231-235, 2017 May.
Article in English | MEDLINE | ID: mdl-28726091

ABSTRACT

For the first time, by using the complex of physicochemical methods (mass-spectrometry, differential scanning calorimetry, spectrofluorimetry, method of spectral and fluorescent probes, dynamic light scattering, and UV spectrophotometry), the oxidation-mediated modification of chemical and spatial structure of albumin has been studied. All albumin structural regions are subjected to oxidation, methionine and aromatic amino acids primarily involved in oxidation. The albumin melting shows a decrease in thermal stabilization of the structure and changing of aggregation upon oxidation. The change in physical and chemical properties of albumin under different quantity of the oxidizer has been analyzed.


Subject(s)
Serum Albumin/metabolism , Amino Acid Sequence , Humans , Models, Molecular , Oxidation-Reduction , Ozone/metabolism , Protein Structure, Secondary , Serum Albumin/chemistry
4.
Dokl Biochem Biophys ; 472(1): 40-43, 2017 Jan.
Article in English | MEDLINE | ID: mdl-28421433

ABSTRACT

For the first time, by using mass-spectrometry method, the oxidation-mediated modification of the catalytic FXIII-A subunit of plasma fibrin-stabilizing factor, pFXIII, has been studied. The oxidative sites were identified to belong to all structural elements of the catalytic subunit: the ß-sandwich (Tyr104, Tyr117, and Cys153), the catalytic core domain (Met160, Trp165, Met266, Cys328, Asp352, Pro387, Arg409, Cys410, Tyr442, Met475, Met476, Tyr482, and Met500), the ß-barrel 1 (Met596), and the ß-barrel 2 (Met647, Pro676, Trp692, Cys696, and Met710), which correspond to 3.9%, 1.11%, 0.7%, and 3.2%, respectively, of oxidative modifications as compared to the detectable amounts of amino acid residues in each of the structural domains. Lack of information on some parts of the molecule may be associated with the spatial unavailability of residues, complicating analysis of the molecule. The absence of oxidative sites localized within crucial areas of the structural domains may be brought about by both the spatial inaccessibility of the oxidant to amino acid residues in the zymogen and the screening effect of the regulatory FXIII-B subunit.


Subject(s)
Catalytic Domain , Factor XIII/chemistry , Factor XIII/metabolism , Humans , Oxidation-Reduction , Protein Conformation , Protein Subunits/chemistry , Protein Subunits/metabolism
5.
Dokl Biochem Biophys ; 467(1): 128-31, 2016 Mar.
Article in English | MEDLINE | ID: mdl-27193716

ABSTRACT

For the first time, the induced oxidative modification of cellular fibrin-stabilizing factor (cFXIII) has been studied. According to the electrophoresis analysis, the conversion of oxidized cFXIII into FXIIIa resulted in producing the enzyme that significantly lost the initial enzymatic activity. At the same time, FXIIIa subjected to induced oxidation was completely devoid of enzymatic activity. The results of FTIR spectroscopy showed that the oxidation of cFXIII or FXIIIa was accompanied by profound changes both in chemical and spatial structures of the protein. The results of this study are in good agreement with our earlier assumption regarding the antioxidant role of the regulatory subunits B of plasma fibrin-stabilizing factor.


Subject(s)
Factor XIII/chemistry , Calcium/chemistry , Cations, Divalent/chemistry , Chromatography, Affinity , Electrophoresis, Polyacrylamide Gel , Factor XIII/isolation & purification , Female , Humans , Oxidants/chemistry , Oxidation-Reduction , Ozone/chemistry , Placenta/chemistry , Polymers/chemistry , Pregnancy , Protein Conformation , Spectroscopy, Fourier Transform Infrared
6.
Dokl Biochem Biophys ; 466: 28-31, 2016.
Article in English | MEDLINE | ID: mdl-27025482

ABSTRACT

The effect on ozone-induced oxidation on the self-assembly of fibrin in the presence of fibrin-stabilizing factor FXIIIa of soluble cross-linked fibrin oligomers was studied in a medium containing moderate urea concentrations. It is established that fibrin oligomers were formed by the protofibrils cross-linked through γ-γ dimers and the fibrils additionally cross-linked by through α-polymers. The oxidation promoted both the accumulation of greater amounts of γ-γ dimers and the formation of protofibrils, fibrils, and their dissociation products emerging with increasing urea concentrations, which have a high molecular weight. It is concluded that the oxidation enhances the axial interactions between D-regions of fibrin molecules.


Subject(s)
Fibrin/chemistry , Protein Multimerization , Factor XIII/chemistry , Factor XIII/metabolism , Fibrin/metabolism , Humans , Oxidation-Reduction , Protein Binding , Urea/chemistry
8.
Biochemistry (Mosc) ; 78(10): 1171-9, 2013 Oct.
Article in English | MEDLINE | ID: mdl-24237152

ABSTRACT

Ozone-induced oxidation of fibrinogen has been investigated. The conversion of oxidized fibrinogen to fibrin catalyzed either by thrombin or by a reptilase-like enzyme, ancistron, in both cases is accompanied by production of gels characterized by a higher weight/length ratio of fibrils in comparison with the native fibrin gels. IR spectra of the D and E fragments isolated from unoxidized and oxidized fibrinogen suggest a noticeable transformation of functional groups by oxidation. A decrease in content of N-H groups in the peptide backbone and in the number of C-H bonds in aromatic structures, as well as a decrease in the intensity of the C-H valence vibrations in aliphatic fragments CH2 and CH3 were found. The appearance in the differential spectra of the D fragments of rather intense peaks in the interval of 1200-800 cm(-1) clearly indicates the interaction of ozone with amino acid residues of methionine, tryptophan, histidine, and phenylalanine. Comparison of the differential spectra for the D and E fragments suggests that fibrinogen fragment D is more sensitive to the oxidant action than fragment E. Using EPR spectroscopy, differences are found in the spectra of spin labels bound with degradation products of oxidized and unoxidized fibrinogen, the D and E fragments, caused by structural and dynamical modifications of the protein molecules in the areas of localization of the spin labels. The relationship between the molecular mechanism of oxidation of fibrinogen and its three-dimensional structure is discussed.


Subject(s)
Fibrinogen/chemistry , Ozone/chemistry , Diffusion , Fibrinogen/isolation & purification , Humans , Molecular Structure , Molecular Weight , Oxidation-Reduction , Ozone/pharmacology
10.
Eksp Klin Farmakol ; 76(3): 23-6, 2013.
Article in Russian | MEDLINE | ID: mdl-23767099

ABSTRACT

The ability of dihydroquercetin to inhibit the oxidation of fibrinogen has been evaluated. It is established that dihydroquercetin inhibits oxidation of fibrinogen by ozone, thus preventing oxidative modification of fibrinogen and preserving its functional activity.


Subject(s)
Fibrinogen/chemistry , Ozone/chemistry , Quercetin/analogs & derivatives , Animals , Humans , Oxidation-Reduction , Quercetin/chemistry
12.
Biochemistry (Mosc) ; 75(10): 1285-93, 2010 Oct.
Article in English | MEDLINE | ID: mdl-21166647

ABSTRACT

Ozone-induced free-radical oxidation of fragments D and E from fibrinogen has been studied. The methods of elastic and dynamic light scattering in combination with electrophoresis of unreduced samples have shown the acceleration of enzymatic covalent crosslinking of molecules of oxidation-modified fragment D under the action of factor XIIIa. UV and IR spectroscopy shows that free-radical oxidation of amino acid residues of polypeptide chains catalyzed by ozone affects the cyclic and amino groups, giving rise to generation of mainly oxygen-containing products. Comparison of the IR spectra obtained for the oxidation-modified D and E fragments revealed more significant transformation of functional groups for the D fragment. EPR spectroscopy showed that the rotational correlation time of spin labels bound to the ozonized proteins decreased in comparison with the non-ozonized proteins. The rotation correlation time of the radicals covalently bound to the ozonized D and E fragments suggests that D fragment of fibrinogen is more sensitive to free-radical oxidation followed by local structural changes. Possible causes of different degrees of oxidation for fragments D and E are discussed.


Subject(s)
Fibrin Fibrinogen Degradation Products/chemistry , Ozone/chemistry , Animals , Cattle , Factor XIIIa/chemistry , Oxidation-Reduction , Spectrophotometry, Infrared , Spectrophotometry, Ultraviolet
14.
Biomed Khim ; 56(3): 381-7, 2010.
Article in Russian | MEDLINE | ID: mdl-20695217

ABSTRACT

Ozone solutions in water and in NaCl solutions found are widely used in technology and medicine. Some times ozone employment meets difficulties due to instability of ozone in solution. The paper describes the results of study of ozone decomposition prepared using solutions in distilled water, solutions of NaCl in water, including physiologic solutions from different manufacturers. Also it was proposed the reaction mechanisms explained influence of OH- and Cl- ions on the decomposition rate. Experimental follow the monomolecular law and are described by a straight line in Ig(Ct/C0) = f(t) coordinates. It can be used as a basis for a new method of evaluation of real ozone dose introduced to patients.


Subject(s)
Ozone/chemistry , Sodium Chloride/chemistry , Water/chemistry , Kinetics , Solutions
16.
Biochemistry (Mosc) ; 74(1): 41-6, 2009 Jan.
Article in English | MEDLINE | ID: mdl-19232047

ABSTRACT

The mechanism of self-assembly of fibrin monomers and fibrinogen aggregation during ozone oxidation has been studied by the methods of elastic and dynamic light-scattering and viscosimetry. Fibrin obtained from oxidized fibrinogen exhibits higher average fiber mass/length ratio compared with native fibrin. Fibrinogen ozonation sharply reduced the latent period preceding aggregation of protein molecules; however, the mechanism of self-assembly of ozonated and non-ozonated fibrinogen cluster was identical. In both cases flexible polymers are formed and reaching a certain critical length they form densely packed structures and aggregate. Using infrared spectroscopy, it has been shown that free radical oxidation of amino acid residues of fibrinogen polypeptide chains catalyzed by ozone results in formation of carbonyl, hydroxyl, and ether groups. It is concluded that fibrinogen peripheral D-domains are the most sensitive to ozonation, which causes local conformational changes in them. On one hand, these changes inhibit the reaction of longitudinal polymerization of monomeric fibrin molecules; on the other hand, they expose reaction centers responsible for self-assembly of fibrinogen clusters.


Subject(s)
Fibrin Fibrinogen Degradation Products/metabolism , Fibrinogen/metabolism , Ozone/chemistry , Kinetics , Oxidation-Reduction , Spectrophotometry, Infrared
18.
Izv Akad Nauk Ser Biol ; (6): 671-9, 2008.
Article in Russian | MEDLINE | ID: mdl-19198072

ABSTRACT

The mechanism of enzymatic covalent crosslinking of fibrinogen molecules under the effect of plasma transglutaminase (factor XIIIa) has been studied. Using the methods of elastic and dynamic light scattering combined with viscosimetry and electrophoresis of the reduced samples, it has been shown that fibrinogen oxidation strongly accelerates self-assembly of the covalently cross-linked fibrinogen polymers. IR-spectroscopy data indicate that the degree of fibrinogen oxidation positively correlates with the amount of epsilon/gamma(-glu)lys isopeptide covalent bonds whose formation is catalyzed by the factor XIIIa. The results of this and our previous studies cast doubt on the widespread concept that native fibrinogen is the substrate for factor XIIIa. In our opinion, only structurally defective fibrinogen molecules that have undergone oxidative structural conversion in the D-domain region are involved in the enzymatic reaction leading to the formation of covalent epsilon/gamma(-glu)lys isopeptide bonds and self-assembly of fibrinogen polymers.


Subject(s)
Factor XIIIa/metabolism , Fibrinogen/chemistry , Oxidation-Reduction , Animals , Cattle , Cross-Linking Reagents/metabolism , Fibrinogen/metabolism , Protein Conformation
19.
Med Tekh ; (5): 47-9, 1982.
Article in Russian | MEDLINE | ID: mdl-7144480

ABSTRACT

Presented in this paper is the sterilization method of the assisted circulation unit. The method has been approved by stand testing and then applied for sterilizing the unit Ae, yeK-5 m when experimental implanting artificial heart. According to the method, ozone in concentration of 5 x 10(-3) moles/1 and with flow rate of 0,5 1/min is passed through an internal circuit of the unit during I h and 15 min. Control wash-out samples from lines have demonstrated complete sterility of the internal circuit. The method makes the sterilization process of such units much easier and may be recommended for clinical application.


Subject(s)
Heart, Artificial , Ozone , Sterilization/methods
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