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1.
Phys Chem Chem Phys ; 22(26): 14910-14917, 2020 Jul 08.
Article in English | MEDLINE | ID: mdl-32584353

ABSTRACT

Neural network potentials (NNPs) trained against density functional theory (DFT) are capable of reproducing the potential energy surface at a fraction of the computational cost. However, most NNP implementations focus on energy and forces. In this work, we modified the NNP model introduced by Behler and Parrinello to predict Fermi energy, band edges, and partial density of states of Cu2O. Our NNP can reproduce the DFT potential energy surface and properties at a fraction of the computational cost. We used our NNP to perform molecular dynamics (MD) simulations and validated the predicted properties against DFT calculations. Our model achieved a root mean squared error of 16 meV for the energy prediction. Furthermore, we show that the standard deviation of the energies predicted by the ensemble of training snapshots can be used to estimate the uncertainty in the predictions. This allows us to switch from the NNP to DFT on-the-fly during the MD simulation to evaluate the forces when the uncertainty is high.

2.
ACS Appl Mater Interfaces ; 12(11): 12656-12667, 2020 Mar 18.
Article in English | MEDLINE | ID: mdl-32083456

ABSTRACT

Sulfur-doped two-dimensional (2D) graphitic carbon nitride nanosheets (2D-SCN) with efficient photocatalytic activity were synthesized via (1) polycondensation of thiourea to form bulk sulfur-doped graphitic carbon nitride (SCN) and (2) followed by thermal oxidative treatment of the prepared SCN via an etching strategy to form 2D-SCN. Sulfur was doped in situ into SCN by using thiourea as the precursor, and the 2D nanosheet structure was obtained during the thermal oxidative etching process. The structural, morphological, and optical properties of the 2D-SCN sample were investigated in detail. Herein, it is shown that the thermal oxidative etching treatment and sulfur doping induced a 2D nanosheet structure (2D-SCN-3h) with a thickness of about 4.0 nm and exposure of more sulfur elements on the surface. The surface area increased from 16.6 m2/g for SCN to 226.9 m2/g. Compared to bulk SCN, a blue shift of the absorption peaks was observed for the obtained 2D-SCN-3h photocatalyst, and the absorption intensity was higher than that of the sulfur-free counterpart (2D-CN). The successful in situ doping of S element into SCN or 2D-SCN-3h samples is beneficial to the introduction of surface N defects and O species. 2D-SCN-3h indicated higher efficiency in photogenerated charge carrier separation and showed the highest reductive activity in photocatalytic splitting of water at a rate of 127.4 µmol/h under simulated solar light irradiation, which was 250 times and 3 times higher than that of SCN and 2D-CN photocatalysts, respectively. The apparent quantum efficiency was estimated to be 8.35% at 420 nm irradiation. The S-C-N bond formed by sulfur doping was beneficial to the charge-transfer process, and this led to higher photocatalytic activity according to partial density of state analysis computed by first-principles methods.

3.
J Chem Inf Model ; 60(4): 1928-1935, 2020 04 27.
Article in English | MEDLINE | ID: mdl-32053367

ABSTRACT

The use of machine learning in chemistry is on the rise for the prediction of chemical properties. The input feature representation or descriptor in these applications is an important factor that affects the accuracy as well as the extent of the explored chemical space. Here, we present the periodic table tensor descriptor that combines features from Behler-Parrinello's symmetry functions and a periodic table representation. Using our descriptor and a convolutional neural network model, we achieved 2.2 kcal/mol and 94 meV/atom mean absolute error for the prediction of the atomization energy of organic molecules in the QM9 data set and the formation energy of materials from Materials Project data set, respectively. We also show that structures optimized with a force field derived from this modelcan be used as input to predict the atomization energies of molecules at density functional theory level. Our approach extends the application of Behler-Parrinello's symmetry functions without a limitation on the number of elements, which is highly promising for universal property calculators in large chemical spaces.


Subject(s)
Machine Learning , Neural Networks, Computer , Physical Phenomena , Thermodynamics
4.
Chemosphere ; 213: 481-497, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30245225

ABSTRACT

In this paper, we report the combination of two metal oxides (TiO2ZnO) that allows mixed density of states to reduce band gap energy, facilitating the photo-oxidation of Congo red dye under visible light. For the oxidation, a possible mechanism is proposed after analyzing the intermediates by GC-MS, and it is consistent with Density Functional Theory (DFT). The nanohybrids were characterized comprehensibly by several analytical techniques such as X-Ray diffraction (XRD), Transmission Electron Microscopy (TEM), Atomic Force Microscopy (AFM), and X-ray Photoelectron Spectroscopy (XPS). For the addition of ZnO to TiO2, a dominance of anatase phase was found rather than other phases (rutile or brookite). A broad band (∼550 nm) is observed in UV-Visible spectra for TiO2ZnO/Ag NPs nm because of Surface Plasmon properties of Ag NPs. The band gap energy was calculated for TiO2ZnO/Ag system, and then it has been further studied by DFT in order to show why the convergence of two semiconductors allows a mixed density of states, facilitating the reduction of the energy gap between occupied and unoccupied bands; ultimately, it improves the performance of catalysts under visible light. Significantly, the interaction of crystal planes (0 0 I) of TiO2 anatase and (0 0 1) of ZnO crucially plays as an important role for the reduction of energy band-gap. Additionally, TiO2ZnOAg NPs were used recognize Saccharomyces cerevisiae cells by con-focal fluorescence microscope, showing that it develops bright bio-images for the cells; while for TiO2 or ZnO or TiO2ZnO NPs, no fluorescent response was seen within the cells.


Subject(s)
Congo Red/chemistry , Light , Photolysis , Titanium/chemistry , Catalysis , Congo Red/radiation effects , Microscopy , Nanoparticles/chemistry , Semiconductors , Spectrum Analysis , Zinc Oxide/chemistry
5.
J Control Release ; 279: 69-78, 2018 06 10.
Article in English | MEDLINE | ID: mdl-29649529

ABSTRACT

Controlled delivery systems play a critical role in the success of bone morphogenetic proteins (i.e., BMP2 and BMP7) for challenged bone repair. Instead of single-drug release that is currently and commonly prevalent, dual-drug delivery strategies are highly desired to achieve effective bone regeneration because natural bone repair process is driven by multiple factors. Particularly, angiogenesis is essential for osteogenesis and requires more than just one factor (e.g., Vascular Endothelial Growth Factor, VEGF). Therefore, we developed a novel mesoporous silicate nanoparticles (MSNs) incorporated-3D nanofibrous gelatin (GF) scaffold for dual-delivery of BMP2 and deferoxamine (DFO). DFO is a hypoxia-mimetic drug that can activate hypoxia-inducible factor-1 alpha (HIF-1α), and trigger subsequent angiogenesis. Sustained BMP2 release system was achieved through encapsulation into large-pored MSNs, while the relative short-term release of DFO was engineered through covalent conjugation with chitosan to reduce its cytotoxicity and elongate its half-life. Both MSNs and DFO were incorporated onto a porous 3D GF scaffold to serve as a biomimetic osteogenic microenvironment. Our data indicated that DFO and BMP2 were released from a scaffold at different release rates (10 vs 28 days) yet maintained their angiogenic and osteogenic ability, respectively. Importantly, our data indicated that the released DFO significantly improved BMP2-induced osteogenic differentiation where the dose/duration was important for its effects in both mouse and human stem cell models. Thus, we developed a novel and tunable MSNs/GF 3D scaffold-mediated dual-drug delivery system and studied the potential application of the both FDA-approved DFO and BMP2 for bone tissue engineering.


Subject(s)
Bone Morphogenetic Protein 2/administration & dosage , Deferoxamine/administration & dosage , Drug Delivery Systems , Tissue Engineering/methods , Animals , Bone and Bones/metabolism , Cell Differentiation , Chitosan/chemistry , Drug Liberation , Gelatin/chemistry , Humans , Mesenchymal Stem Cells/metabolism , Mice , Nanofibers , Nanoparticles , Osteogenesis/physiology , Porosity , Silicates/chemistry , Time Factors
6.
Molecules ; 20(12): 21881-95, 2015 Dec 08.
Article in English | MEDLINE | ID: mdl-26670222

ABSTRACT

Mesoporous titanium dioxide materials were prepared using a nanocasting technique involving silica SBA-15 as the hard-template. At an optimal loading of titanium precursor, the hexagonal periodic array of pores in SBA-15 was retained. The phases of titanium dioxide could be easily varied by the number of impregnation cycles and the nature of titanium alkoxide employed. Low number of impregnation cycles produced mixed phases of anatase and TiO2(B). The mesoporous TiO2 materials were tested for solar hydrogen production, and the material consisting of 98% anatase and 2% TiO2(B) exhibited the highest yield of hydrogen from the photocatalytic splitting of water. The periodicity of the pores was an important factor that influenced the photocatalytic activity. This study indicates that mixed phases of titania containing ordered array of pores can be prepared by using the nanocasting strategy.


Subject(s)
Nanotechnology/methods , Silicon Dioxide/chemistry , Titanium/chemistry , Catalysis , Hydrogen/metabolism , Light , Particle Size , Photosensitizing Agents/chemistry , Porosity , Surface Properties , Water/chemistry
7.
ACS Appl Mater Interfaces ; 7(7): 4368-80, 2015 Feb 25.
Article in English | MEDLINE | ID: mdl-25633643

ABSTRACT

Mesoporous TiO2 photocatalysts were prepared in ethanol media by using relatively green, template free sol-gel technique. A mild hydrothermal treatment procedure was employed to tune the pore sizes of the materials. Comprehensive techniques that include powder X-ray diffraction, diffuse reflectance spectroscopy, specific surface area analysis, electron microscopy, FT-IR, TGA, and ζ-potential measurements were used to characterize the titania materials. Porosity (pore size and pore volume) of the materials were found to be key factors for the variation in the rate of photocatalytic degradation of rhodamine B; in addition to specific surface area, and surface hydroxyl groups. An increase in porosity permits effective transport of the dye molecules resulting in an increase in the rate of the degradation in materials having larger pores. A detailed electrospray ionization-mass spectrometric (ESI-MS) study was carried out for selected materials to identify photodegraded intermediates and products formed during the degradation of rhodamine B. In addition, experiments were also carried out to understand the role of reactive oxygen species (ROS). In summary, this work provides a simple way to tune pore sizes without the use of any template and an insight into the influence of pore size for the photocatalytic degradation of rhodamine B.

8.
Phys Chem Chem Phys ; 16(5): 2048-61, 2014 Feb 07.
Article in English | MEDLINE | ID: mdl-24343278

ABSTRACT

CdS incorporated Si-MCM-48 and Ti-MCM-48 cubic phased mesoporous photocatalysts were prepared by a two-step modification synthetic approach under relatively mild conditions. A highly efficient (24.8%, apparent quantum yield (AQY)) photocatalyst for visible light (λ > 400 nm) enabled solar hydrogen evolution can be realized by assembling CdS with Ti-MCM-48 cubic mesoporous materials in the absence of a noble metal co-catalyst. The photocatalytic mechanism was thoroughly investigated and demonstrated by conducting a wealth of characterization techniques such as powder X-ray diffraction (XRD), nitrogen adsorption isotherm, transmission electron microscopy (TEM), UV-visible diffuse reflectance spectroscopy (DRS), X-ray photoelectron spectroscopy (XPS), ultraviolet photoelectron spectroscopy (UVPS), atomic absorption spectroscopy (AAS), photoluminescence (PL) spectroscopy, time-resolved fluorescence emission decay, and electron paramagnetic resonance (EPR) spectroscopy studies. This work is the first to unambiguously identify the band positions of both CdS and TiO2 encapsulated in porous materials. The photocatalytic activity of the CdS incorporated Ti-MCM-48 mesoporous photocatalysts was found to be dependent on the content of both CdS and TiO2. A correlation between the electron injection efficiency and the photocatalytic activity was established as well in the CdS incorporated Ti-MCM-48 mesoporous photocatalysts.

9.
Materials (Basel) ; 7(4): 2697-2746, 2014 Mar 31.
Article in English | MEDLINE | ID: mdl-28788590

ABSTRACT

Evaporation-Induced Self-Assembly (EISA) method for the preparation of mesoporous titanium dioxide materials is reviewed. The versatility of EISA method for the rapid and facile synthesis of TiO2 thin films and powders is highlighted. Non-ionic surfactants such as Pluronic P123, F127 and cationic surfactants such as cetyltrimethylammonium bromide have been extensively employed for the preparation of mesoporous TiO2. In particular, EISA method allows for fabrication of highly uniform, robust, crack-free films with controllable thickness. Eleven characterization techniques for elucidating the structure of the EISA prepared mesoporous TiO2 are discussed in this paper. These many characterization methods provide a holistic picture of the structure of mesoporous TiO2. Mesoporous titanium dioxide materials have been employed in several applications that include Dye Sensitized Solar Cells (DSSCs), photocatalytic degradation of organics and splitting of water, and batteries.

10.
J Environ Manage ; 128: 530-9, 2013 Oct 15.
Article in English | MEDLINE | ID: mdl-23831675

ABSTRACT

Aperiodic mesoporous titania-silica (TiO2·SiO2) xerogels with varying silica contents were synthesized under ambient conditions. The physico-chemical properties of the xerogels were examined by a variety of techniques that include powder X-Ray Diffraction (XRD), nitrogen adsorption, Fourier Transform-Infra-Red spectroscopy (FT-IR), Scanning and Transmission Electron Microscopies (SEM and TEM), Thermo Gravimetric Analysis (TGA), zeta potential, and Diffuse Reflectance Spectroscopic (DRS) studies. The adsorption of a model dye molecule, rhodamine B (RhB) was studied over the titania-silica xerogels and compared with titania and silica. It was determined that the pore volume of the xerogels mainly influences the adsorption of RhB. The xerogels exhibited good adsorption capacity with more than 90% dye removal at low dye concentrations. Our results suggest that low cost approaches to the synthesis of xerogels with tailored properties such as large pore volume could provide cost-effective solutions to mitigate environmental problems related to removal of water based toxic pollutants such as dyes by simple adsorption processes.


Subject(s)
Coloring Agents/chemistry , Gels/chemistry , Rhodamines/chemistry , Silicon Dioxide/chemistry , Titanium/chemistry , Water Pollutants, Chemical/chemistry , Adsorption , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , Porosity , Powders , Spectroscopy, Fourier Transform Infrared , X-Ray Diffraction
11.
Chem Commun (Camb) ; 49(31): 3221-3, 2013 Apr 21.
Article in English | MEDLINE | ID: mdl-23482963

ABSTRACT

A RuO2-CdS-Ti-MCM-48 mesoporous material has been prepared. This composite material generates hydrogen and oxygen in the absence of a Pt co-catalyst and most importantly photocorrosion of CdS is completely eliminated.

12.
Chem Commun (Camb) ; 49(12): 1223-5, 2013 Feb 11.
Article in English | MEDLINE | ID: mdl-23282532

ABSTRACT

A MOF-5 [Zn(4)O(BDC)(3); BDC = 1,4-benzenedicarboxylate]@SBA-15 hybrid material has been prepared by using SBA-15 as a matrix. This hybrid material exhibits improved hydrostability under ambient conditions and unique gas adsorption behavior compared with pristine MOF-5.

13.
Langmuir ; 27(7): 4020-8, 2011 Apr 05.
Article in English | MEDLINE | ID: mdl-21401066

ABSTRACT

The antibacterial properties of zinc oxide nanoparticles were investigated using both gram-positive and gram-negative microorganisms. These studies demonstrate that ZnO nanoparticles have a wide range of antibacterial activities toward various microorganisms that are commonly found in environmental settings. The antibacterial activity of the ZnO nanoparticles was inversely proportional to the size of the nanoparticles in S. aureus. Surprisingly, the antibacterial activity did not require specific UV activation using artificial lamps, rather activation was achieved under ambient lighting conditions. Northern analyses of various reactive oxygen species (ROS) specific genes and confocal microscopy suggest that the antibacterial activity of ZnO nanoparticles might involve both the production of reactive oxygen species and the accumulation of nanoparticles in the cytoplasm or on the outer membranes. Overall, the experimental results suggest that ZnO nanoparticles could be developed as antibacterial agents against a wide range of microorganisms to control and prevent the spreading and persistence of bacterial infections.


Subject(s)
Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Nanoparticles/chemistry , Zinc Oxide/chemistry , Zinc Oxide/pharmacology , Gram-Negative Bacteria/drug effects , Gram-Negative Bacteria/metabolism , Gram-Positive Bacteria/drug effects , Gram-Positive Bacteria/metabolism , Microbial Sensitivity Tests , Microscopy, Confocal , Reactive Oxygen Species/metabolism
14.
Org Biomol Chem ; 8(19): 4316-21, 2010 Oct 07.
Article in English | MEDLINE | ID: mdl-20668769

ABSTRACT

A novel, heterogeneous Pd-MCM-48 catalyst has been developed by encapsulating palladium nanoparticles into the cubic phase of mesoporous MCM-48 matrix at room temperature. The catalyst demonstrated excellent chemo- and regioselectivity for the hydrogenation of olefins at room temperature within 30-80 min. The turnover frequency for the hydrogenation is very high (4400 h(-1)). Interestingly, selectivity of the catalyst was significantly influenced by the mode of addition of palladium precursor. Moreover, the catalyst was also very effective for the coupling reactions with the formation of carbon-carbon and carbon-nitrogen bonds under ligand-free and aerobic conditions.

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