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1.
Front Plant Sci ; 13: 721064, 2022.
Article in English | MEDLINE | ID: mdl-35712586

ABSTRACT

Norway spruce has a wide natural distribution range, harboring substantial physiological and genetic variation. There are three altitudinal ecotypes described in this species. Each ecotype has been shaped by natural selection and retains morphological and physiological characteristics. Foliar spectral reflectance is readily used in evaluating the physiological status of crops and forest ecosystems. However, underlying genetics of foliar spectral reflectance and pigment content in forest trees has rarely been investigated. We assessed the reflectance in a clonal bank comprising three ecotypes in two dates covering different vegetation season conditions. Significant seasonal differences in spectral reflectance among Norway spruce ecotypes were manifested in a wide-ranging reflectance spectrum. We estimated significant heritable variation and uncovered phenotypic and genetic correlations among growth and physiological traits through bivariate linear models utilizing spatial corrections. We confirmed the relative importance of the red edge within the context of the study site's ecotypic variation. When interpreting these findings, growth traits such as height, diameter, crown length, and crown height allowed us to estimate variable correlations across the reflectance spectrum, peaking in most cases in wavelengths connected to water content in plant tissues. Finally, significant differences among ecotypes in reflectance and other correlated traits were detected.

2.
Sci Rep ; 11(1): 23119, 2021 11 30.
Article in English | MEDLINE | ID: mdl-34848793

ABSTRACT

We investigated the genetic structure of three phenotypically distinct ecotypic groups of Norway spruce (Picea abies) belonging to three elevational classes; namely, low- (acuminata), medium- (europaea), and high-elevation (obovata) form, each represented by 150 trees. After rigorous filtering, we used 1916 Genotyping-by-Sequencing generated SNPs for analysis. Outputs from three multivariate analysis methods (Bayesian clustering algorithm implemented in STRUCTURE, Principal Component Analysis, and the Discriminant Analysis of Principal Components) indicated the presence of a distinct genetic cluster representing the high-elevation ecotypic group. Our findings bring a vital message to forestry practice affirming that artificial transfer of forest reproductive material, especially for stands under harsh climate conditions, should be considered with caution.


Subject(s)
Picea/genetics , Polymorphism, Single Nucleotide , Algorithms , Bayes Theorem , Chromosome Mapping , Climate , Discriminant Analysis , Ecotype , Forestry , Genetic Variation , Genotype , Geography , Multivariate Analysis , Pollen , Principal Component Analysis , Sequence Analysis, DNA
3.
Sci Rep ; 10(1): 20789, 2020 11 27.
Article in English | MEDLINE | ID: mdl-33247164

ABSTRACT

Norway spruce has a broad natural distribution range, which results in a substantial variety of its physiological and genetic variation. There are three distinct altitudinal ecotypes described in this tree species. The physiological optimum of each ecotype may be shifted due to ongoing climate change, especially in traits associated with water demand that might be crucial for adaptation. Dehydrins are proteins that help to mitigate the adverse effects of dehydration. Dehydrin gene expression patterns appeared to be a suitable marker for plant stress assessment. Genetically determined differences in response between individuals and populations were formerly studied, however, mainly in controlled conditions. We evaluated ecotypic variation in dehydrin gene expression in a clonal bank comprised of all three ecotypes. A genetic relationship among targeted trees was uncovered utilizing GBS (Genotyping by Sequencing) platform. We sampled 4-6 trees of each ecotype throughout 15 months period. Subsequently, we assessed the RNA expression of dehydrin genes by qRT-PCR. For this study, we deliberately selected dehydrins from different categories. Our findings detected significant differences among ecotypes in dehydrin expression. The association of recorded climatic variables and individual gene expression across the study period was evaluated and revealed, for certain genes, a correlation between dehydrin gene expression and precipitation, temperature, and day-length.


Subject(s)
Picea/genetics , Plant Proteins/genetics , Acclimatization/genetics , Climate Change , Czech Republic , Droughts , Ecotype , Gene Expression Regulation, Plant , Genes, Plant , Picea/physiology , Plant Proteins/physiology
4.
Sci Rep ; 8(1): 11593, 2018 08 02.
Article in English | MEDLINE | ID: mdl-30072772

ABSTRACT

Seed orchards main function is delivering breeding programs' gains in the form of genetically improved seedlings. They are unique experimental populations, perfectly suited for studying various pollination environments (natural or otherwise), affecting their mating system parameters. Here, under different pollination environment (natural and intrusive (pollen augmentation and/or bloom-delay)), the mating system of a second generation, wind-pollinated, coastal Douglas-fir (Pseudotsuga menziesii var. menziesii (Mirb.) Franco) seed orchard was evaluated over four years. Using DNA microsatellite markers and bulk seed samples, we conducted pedigree reconstruction to assign each seed's male and female parents, followed by determining the extent of pollen contamination (external gene flow), selfing rate, and, parental gametic contribution for each year. Overall, external pollen contamination rates ranged between 10 and 28%, selfing rate varied between 12 and 17%, and 80% of the seed crops were produced by 37-64% of the orchard's parents. Pollination environment and seed crop size substantially influenced the observed results, particularly for small crops as pollen contamination was high in natural (28%) vs. intrusive pollination (10%). Generally, irrespective of the crop size, seed produced under natural pollination had higher pollen contamination, confirming the role of pollination environment manipulation in improving seed crops' genetic quality.


Subject(s)
Microsatellite Repeats , Plant Breeding , Pollen , Pollination/physiology , Pseudotsuga , Seeds , Pollen/genetics , Pollen/growth & development , Pseudotsuga/genetics , Pseudotsuga/growth & development , Seeds/genetics , Seeds/growth & development
5.
Tree Physiol ; 36(7): 883-95, 2016 07.
Article in English | MEDLINE | ID: mdl-27126227

ABSTRACT

Current knowledge of the genetic mechanisms underlying the inheritance of photosynthetic activity in forest trees is generally limited, yet it is essential both for various practical forestry purposes and for better understanding of broader evolutionary mechanisms. In this study, we investigated genetic variation underlying selected chlorophyll a fluorescence (ChlF) parameters in structured populations of Scots pine (Pinus sylvestris L.) grown on two sites under non-stress conditions. These parameters were derived from the OJIP part of the ChlF kinetics curve and characterize individual parts of primary photosynthetic processes associated, for example, with the exciton trapping by light-harvesting antennae, energy utilization in photosystem II (PSII) reaction centers (RCs) and its transfer further down the photosynthetic electron-transport chain. An additive relationship matrix was estimated based on pedigree reconstruction, utilizing a set of highly polymorphic single sequence repeat markers. Variance decomposition was conducted using the animal genetic evaluation mixed-linear model. The majority of ChlF parameters in the analyzed pine populations showed significant additive genetic variation. Statistically significant heritability estimates were obtained for most ChlF indices, with the exception of DI0/RC, φD0 and φP0 (Fv/Fm) parameters. Estimated heritabilities varied around the value of 0.15 with the maximal value of 0.23 in the ET0/RC parameter, which indicates electron-transport flux from QA to QB per PSII RC. No significant correlation was found between these indices and selected growth traits. Moreover, no genotype × environment interaction (G × E) was detected, i.e., no differences in genotypes' performance between sites. The absence of significant G × E in our study is interesting, given the relatively low heritability found for the majority of parameters analyzed. Therefore, we infer that polygenic variability of these indices is selectively neutral.


Subject(s)
Chlorophyll/physiology , Genetic Variation , Genotype , Photosynthesis/genetics , Photosynthetic Reaction Center Complex Proteins/physiology , Pinus sylvestris/genetics , Quantitative Trait, Heritable , Animals , Chlorophyll A , Electron Transport , Fluorescence , Forests , Genes, Plant , Light , Photosystem II Protein Complex/physiology , Pinus sylvestris/physiology , Trees/genetics , Trees/physiology
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