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1.
Nat Commun ; 15(1): 3429, 2024 Apr 23.
Article in English | MEDLINE | ID: mdl-38653764

ABSTRACT

Carbohydrate-binding modules (CBMs) are non-catalytic proteins found appended to carbohydrate-active enzymes. Soil and marine bacteria secrete such enzymes to scavenge nutrition, and they often use CBMs to improve reaction rates and retention of released sugars. Here we present a structural and functional analysis of the recently established CBM family 92. All proteins analysed bind preferentially to ß-1,6-glucans. This contrasts with the diversity of predicted substrates among the enzymes attached to CBM92 domains. We present crystal structures for two proteins, and confirm by mutagenesis that tryptophan residues permit ligand binding at three distinct functional binding sites on each protein. Multivalent CBM families are uncommon, so the establishment and structural characterisation of CBM92 enriches the classification database and will facilitate functional prediction in future projects. We propose that CBM92 proteins may cross-link polysaccharides in nature, and might have use in novel strategies for enzyme immobilisation.


Subject(s)
Bacterial Proteins , beta-Glucans , beta-Glucans/metabolism , beta-Glucans/chemistry , Crystallography, X-Ray , Binding Sites , Bacterial Proteins/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Protein Binding , Models, Molecular
2.
Nat Commun ; 14(1): 2827, 2023 May 17.
Article in English | MEDLINE | ID: mdl-37198187

ABSTRACT

Optically transparent wood has been fabricated by structure-retaining delignification of wood and subsequent infiltration of thermo- or photocurable polymer resins but still limited by the intrinsic low mesopore volume of the delignified wood. Here we report a facile approach to fabricate strong transparent wood composites using the wood xerogel which allows solvent-free infiltration of resin monomers into the wood cell wall under ambient conditions. The wood xerogel with high specific surface area (260 m2 g-1) and high mesopore volume (0.37 cm3 g-1) is prepared by evaporative drying of delignified wood comprising fibrillated cell walls at ambient pressure. The mesoporous wood xerogel is compressible in the transverse direction and provides precise control of the microstructure, wood volume fraction, and mechanical properties for the transparent wood composites without compromising the optical transmittance. Transparent wood composites of large size and high wood volume fraction (50%) are successfully prepared, demonstrating potential scalability of the method.

3.
Small ; 19(17): e2205056, 2023 04.
Article in English | MEDLINE | ID: mdl-36703510

ABSTRACT

Nature has evolved elegant ways to alter the wood cell wall structure through carbohydrate-active enzymes, offering environmentally friendly solutions to tailor the microstructure of wood for high-performance materials. In this work, the cell wall structure of delignified wood is modified under mild reaction conditions using an oxidative enzyme, lytic polysaccharide monooxygenase (LPMO). LPMO oxidation results in nanofibrillation of cellulose microfibril bundles inside the wood cell wall, allowing densification of delignified wood under ambient conditions and low pressure into transparent anisotropic films. The enzymatic nanofibrillation facilitates microfibril fusion and enhances the adhesion between the adjacent wood fiber cells during densification process, thereby significantly improving the mechanical performance of the films in both longitudinal and transverse directions. These results improve the understanding of LPMO-induced microstructural changes in wood and offer an environmentally friendly alternative for harsh chemical treatments and energy-intensive densification processes thus representing a significant advance in sustainable production of high-performance wood-derived materials.


Subject(s)
Cellulose , Wood , Cellulose/chemistry , Wood/chemistry , Polysaccharides , Oxidation-Reduction , Mixed Function Oxygenases/metabolism , Oxidative Stress
4.
Colloids Surf B Biointerfaces ; 171: 590-596, 2018 Nov 01.
Article in English | MEDLINE | ID: mdl-30098537

ABSTRACT

Liquid-liquid phase transition known as coacervation of resilin-like-peptide fusion proteins containing different terminal domains were investigated. Two different modular proteins were designed and produced and their behavior were compared to a resilin-like-peptide without terminal domains. The size of the particle-like coacervates was modulated by the protein concentration, pH and temperature. The morphology and three-dimensional (3D) structural details of the coacervate particles were investigated by cryogenic transmission electron microscopy (cryo-TEM) and tomography (cryo-ET) reconstruction. Selective adhesion of the coacervates on cellulose and graphene surfaces was demonstrated.


Subject(s)
Drosophila Proteins/chemistry , Animals , Drosophila , Drosophila Proteins/isolation & purification , Hydrogen-Ion Concentration , Particle Size , Phase Transition , Surface Properties , Temperature
5.
Microb Biotechnol ; 11(5): 869-880, 2018 09.
Article in English | MEDLINE | ID: mdl-29697197

ABSTRACT

Feruloyl esterases (FAEs) are accessory enzymes for plant biomass degradation, which catalyse hydrolysis of carboxylic ester linkages between hydroxycinnamic acids and plant cell-wall carbohydrates. They are a diverse group of enzymes evolved from, e.g. acetyl xylan esterases (AXEs), lipases and tannases, thus complicating their classification and prediction of function by sequence similarity. Recently, an increasing number of fungal FAEs have been biochemically characterized, owing to their potential in various biotechnological applications and multitude of candidate FAEs in fungal genomes. However, only part of the fungal FAEs are included in Carbohydrate Esterase family 1 (CE1) of the carbohydrate-active enzymes (CAZy) database. In this work, we performed a phylogenetic analysis that divided the fungal members of CE1 into five subfamilies of which three contained characterized enzymes with conserved activities. Conservation within one of the subfamilies was confirmed by characterization of an additional CE1 enzyme from Aspergillus terreus. Recombinant A. terreus FaeD (AtFaeD) showed broad specificity towards synthetic methyl and ethyl esters, and released ferulic acid from plant biomass substrates, demonstrating its true FAE activity and interesting features as potential biocatalyst. The subfamily division of the fungal CE1 members enables more efficient selection of candidate enzymes for biotechnological processes.


Subject(s)
Aspergillus/enzymology , Carboxylic Ester Hydrolases/genetics , Carboxylic Ester Hydrolases/metabolism , Phylogeny , Aspergillus/genetics , Biomass , Biotransformation , Carboxylic Ester Hydrolases/classification , Cloning, Molecular , Coumaric Acids/metabolism , Gene Expression , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology , Substrate Specificity
6.
Biomacromolecules ; 18(6): 1866-1873, 2017 Jun 12.
Article in English | MEDLINE | ID: mdl-28440631

ABSTRACT

We investigated how a genetically engineered resilin fusion protein modifies cellulose surfaces. We characterized the pH-responsive behavior of a resilin-like polypeptide (RLP) having terminal cellulose binding modules (CBM) and showed its binding to cellulose nanofibrils (CNF). Characterization of the resilin fusion protein at different pHs revealed substantial conformational changes of the protein, which were observed as swelling and contraction of the protein layer bound to the nanocellulose surface. In addition, we showed that employment of the modified resilin in cellulose hydrogel and nanopaper increased their modulus of stiffness through a cross-linking effect.


Subject(s)
Biocompatible Materials/chemistry , Cellulose/chemistry , Insect Proteins/chemistry , Nanostructures/chemistry , Recombinant Fusion Proteins/chemistry , Amino Acid Sequence , Cloning, Molecular , Elastic Modulus , Elasticity , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Hydrogen-Ion Concentration , Insect Proteins/biosynthesis , Insect Proteins/genetics , Protein Binding , Protein Engineering , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Trichoderma/genetics , Trichoderma/metabolism
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