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1.
Mol Biol (Mosk) ; 51(4): 710-716, 2017.
Article in Russian | MEDLINE | ID: mdl-28900091

ABSTRACT

Complexes of peptide fragment 1-16 of beta-amyloid with transition metals play an important role in the development of a broad class of neurodegenerative diseases, which determines the interest in investigating the structures of these complexes. In this work, we have applied the method of the deuterium/hydrogen exchange in combination with ultra-high-resolution mass spectrometry to study conformational changes in (1-16) beta-amyloid peptide induced by binding of zinc(II) atoms. The efficiency of the deuterium/hydrogen exchange depended on the number of zinc atoms bound to the peptide and on the temperature of the ionization source region. Deuterium/hydrogen exchange reactions have been performed directly in the ionization source. The number of exchanges decreased considerably with an increasing numbers of zinc atoms. The relationship has been described with a damped exponential curve, which indicated that the binding of zinc atoms altered the conformation of the peptide ion by making it less open, which limits the access to inner areas of the molecule.


Subject(s)
Amyloid beta-Peptides/chemistry , Peptide Fragments/chemistry , Zinc Acetate/chemistry , Deuterium Exchange Measurement , Models, Molecular , Protein Binding , Protein Structure, Secondary , Spectrometry, Mass, Electrospray Ionization , Temperature
2.
Bull Exp Biol Med ; 160(6): 861-3, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27165072

ABSTRACT

This study was designed to collect and perform a proteomic analysis of expired air condensate in newborns receiving respiratory support at the Department of Resuscitation and Intensive Care. The proteomic composition of expired air condensate was evaluated in newborns at various stages of development and with different abnormalities.


Subject(s)
Proteome/metabolism , Breath Tests , Exhalation , Humans , Infant, Newborn , Proteomics , Respiration, Artificial
3.
Bull Exp Biol Med ; 160(6): 867-70, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27165075

ABSTRACT

Proteomic analysis of the urine was used for noninvasive diagnostics of abnormalities in newborns treated in the neonatal intensive care unit. This approach can be used to differentiate between infectious and noninfectious respiratory disorders.


Subject(s)
Pneumonia/urine , Proteinuria/urine , Proteome/metabolism , Adult , Case-Control Studies , Female , Humans , Infant, Newborn , Male , Pneumonia/diagnosis , Pregnancy , Proteinuria/diagnosis
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