Formation of extraterrestrial peptides and their derivatives.

The formation of protein precursors, due to the condensation of atomic carbon under the low-temperature conditions of the molecular phases of the interstellar medium, opens alternative pathways for the origin of life. We perform peptide synthesis under conditions prevailing in space and provide a comprehensive analytic characterization of its products. The application of 13C allowed us to confirm the suggested pathway of peptide formation that proceeds due to the polymerization of aminoketene molecules that are formed in the C + CO + NH3 reaction. Here, we address the question of how the efficiency of peptide production is modified by the presence of water molecules. We demonstrate that although water slightly reduces the efficiency of polymerization of aminoketene, it does not prevent the formation of peptides.

Electronic spectroscopy of cationic adamantane clusters and dehydrogenated adamantane in helium droplets.

We report the first helium-tagged electronic spectra of cationic adamantane clusters, along with its singly, doubly, and triply dehydrogenated analogues embedded in helium droplets. Absorption spectra were measured by recording the evaporation of helium atoms as a function of laser wavelength in the range of 300-2150 nm. Experimental spectra are coupled with simulated spectra obtained from quantum chemical calculations. The spectrum of cationic adamantane agrees with the electronic photodissociation spectrum measured previously, with an additional low-energy absorption at around 1000 nm. The spectra of the dehydrogenated molecules present broad absorptions exclusively in the high-energy region (300-600 nm). For the higher order adamantane dimer and trimer ions, strong absorptions are observed in the low-energy region (900-2150 nm), rationalised by transitions delocalised over two adamantane units.

Adsorption of Helium on Small Cationic PAHs: Influence of Hydrocarbon Structure on the Microsolvation Pattern.

The adsorption of up to ∼100 helium atoms on cations of the planar polycyclic aromatic hydrocarbons (PAHs) anthracene, phenanthrene, fluoranthene, and pyrene was studied by combining helium nanodroplet mass spectrometry with classical and quantum computational methods. Recorded time-of-flight mass spectra reveal a unique set of structural features in the ion abundance as a function of the number of attached helium atoms for each of the investigated PAHs. Path-integral molecular dynamics simulations were used with a polarizable potential to determine the underlying adsorption patterns of helium around the studied PAH cations and in good general agreement with the experimental data. The calculated structures of the helium-PAH complexes indicate that the arrangement of adsorbed helium atoms is highly sensitive toward the structure of the solvated PAH cation. Closures of the first solvation shell around the studied PAH cations are suggested to lie between 29 and 37 adsorbed helium atoms depending on the specific PAH cation. Helium atoms are found to preferentially adsorb on these PAHs following the 3×3 commensurate pattern common for graphitic surfaces, in contrast to larger carbonaceous molecules like corannulene, coronene, and fullerenes that exhibit a 1 × 1 commensurate phase.

Formation of a long-lived cyclic isomer of ethylenedione.

A century of unsuccessful attempts to identify the neutral ethylenedione molecule combined with the results of quantum-chemical computations resulted in the conclusion on the instability of this molecule. In this article, we demonstrate that although the lowest energy isomer of ethylenedione with linear geometry is indeed unstable, a higher energy three-membered cyclic isomer can be stabilized, and at low temperature has a life-time longer than one millisecond. In our study, the ethylenedione C2O2 molecule was synthesized in the low-temperature reaction CO2 + C → C2O2 inside liquid helium nanodroplets. To study the reaction, a newly developed calorimetric technique was applied. Single pairs of reactants were incorporated into tiny helium droplets having a temperature of 0.37 K. The reaction energy was transferred to liquid helium stabilizing an intermediate gas-phase reaction product. The energy transfer also resulted in the evaporation of helium atoms. Therefore, the change of the helium droplets' size allowed precise calorimetry on a molecular scale.

Building Carbon Bridges on and between Fullerenes in Helium Nanodroplets.

We report the observation of sequential encounters of fullerenes with C atoms in an extremely cold environment. Experiments were performed with helium droplets at 0.37 K doped with C60 molecules and C atoms derived from a novel, pure source of C atoms. Very high-resolution mass spectra revealed the formation of carbenes of the type C60(C:)n with n up to 6. Bridge-type bonding of the C adatoms to form the known dumbbell C60═C═C60 also was observed. Density functional theory calculations were performed that elucidated the carbene character of the C60(C:)n species and their structures. Mass spectra taken in the presence of water impurities and in separate experiments with added H2 also revealed the formation of the adducts C60C(n)(H2O)n and C60C(n)(H2)n probably by H-OH and H-H bond insertion, respectively, and nonreactivity for the dumbell. So C adatoms that form carbenes C60(C:)n can endow pristine C60 with a higher chemical reactivity.

Resonant two-photon ionization spectroscopy of Al atoms and dimers solvated in helium nanodroplets.

Resonant two-photon ionization (R2PI) spectroscopy has been applied to investigate the solvation of Al atoms in helium droplets. The R2PI spectra reveal vibrational progressions that can be attributed to Al-He(n) vibrations. It is found that small helium droplets have very little chance to pick up an aluminum atom after collision. However, the pick-up probability increases with the size of the helium droplets. The absorption band that is measured by monitoring the ions on the mass of the Al dimer is found to be very little shifted with respect to the Al monomer band (∼400 cm(-1)). However, using the same laser wavelength, we were unable to detect any Al(n) photoion with n larger than two.

Ultra-low-temperature reactions of C(³P0) atoms with benzene molecules in helium droplets.

The reaction of carbon atoms with benzene has been investigated in liquid helium droplets at T = 0.37 K. We found an addition of the carbon atom to form an initial intermediate complex followed by a ring opening and the formation of a seven-membered ring. In contrast to a previous gas phase study, the reaction is frozen after these steps and the loss of hydrogen does not occur. A calorimetric technique was applied to monitor the energy balance of the reaction. It was found that more than 267 kJ mol(-1) were released in this reaction. This estimation is in line with quantum chemical calculations of the formation energy of a seven-membered carbon ring. It is suggested that reactions of this kind could be responsible for the low abundance of small polycyclic aromatic hydrocarbon molecules in the interstellar medium. We also found the formation of weakly bonded water-carbon adducts, in which the carbon atom is linked to the oxygen atom of the water molecule with a binding energy of about 33.4 kJ mol(-1).

Cold condensation of dust in the ISM.

The condensation of complex silicates with pyroxene and olivine composition under conditions prevailing in molecular clouds has been experimentally studied. For this purpose, molecular species comprising refractory elements were forced to accrete on cold substrates representing the cold surfaces of surviving dust grains in the interstellar medium. The efficient formation of amorphous and homogeneous magnesium iron silicates at temperatures of about 12 K has been monitored by IR spectroscopy. The gaseous precursors of such condensation processes in the interstellar medium are formed by erosion of dust grains in supernova shock waves. In the laboratory, we have evaporated glassy silicate dust analogs and embedded the released species in neon ice matrices that have been studied spectroscopically to identify the molecular precursors of the condensing solid silicates. A sound coincidence between the 10 microm band of the interstellar silicates and the 10 microm band of the low-temperature siliceous condensates can be noted.

Threshold ionization, structural isomers, and electronic states of M2O2 (M = Sc, Y, and La).

M2O2 (M = Sc, Y, and La) were synthesized in a pulsed laser-vaporization molecular beam source and studied by mass-analyzed threshold ionization (MATI) spectroscopy and ab initio calculations. Adiabatic ionization energies (AIEs) and several vibrational frequencies were measured accurately for the first time from the MATI spectra. Six possible structural isomers of M2O2 were considered in the calculations and the three converged structures were used in the spectral analysis. A planar cyclic structure in D2h point group was predicted to be the most stable one by the theory and observed by the experiment. The cyclic structure is formed by joining two MO2 fragments together through two shared oxygen atoms. In forming the ground state clusters, each metal atom loses two (n - 1)d electrons and as a result, has only one ns electron in the metal-based valence orbital. The ground electronic state of Sc2O2 is (1)A(g), and those of Y2O2 and La2O2 are (3)B(1u). Ionization of both (1)A(g) and (3)B(1u) neutral states yields the (2)A(g) ion state by removing one of the two ns electrons, and the resultant ion has a similar geometry to the neutral cluster. The AIEs of the clusters are 5.5752 (6), 5.2639 (6), 4.5795 (6) eV for M = Sc, Y, and La, respectively. The vibrational frequencies of the observed modes, including O-M and M-M stretches, are in the range of 200-800 cm(-1).

Reactivity of iron atoms at low temperature.

We have studied the reactions of iron atoms and clusters with oxygen, acetylene, and water molecules in superfluid He droplets at T = 0.37 K. For all systems, the formation of weakly bound adducts was found, but the insertion reaction of iron into existing molecular bonds could not be observed. The formation of FeOH2 and FeC2H2 complexes was evidenced by mass spectrometry. However, it was found that the reaction of iron atoms with oxygen molecules under similar conditions leads to the stabilization of an intermediate reaction product, the weakly bound linear FeOO adduct, which undergoes complete dissociation upon electron impact ionization. All reactions observed are not expected to proceed in the gas phase. The R2PI spectrum of the y5D4 0 ← a5D4 atomic transition of Fe solvated in helium droplets was recorded. A relatively small blue shift of ∼ 120 cm(-1) with respect to the gas phase position was found.

Mass-analyzed threshold ionization and structural isomers of M3O4 (M = Sc, Y, and La).

M(3)O(4) (M = Sc, Y, and La) were produced in a pulsed laser-vaporization molecular beam source and studied by mass-analyzed threshold ionization (MATI) spectroscopy and electronic structure calculations. Adiabatic ionization energies (AIEs) of the neutral clusters and vibrational frequencies of the cations were measured accurately for the first time from the MATI spectra. Five possible structural isomers of M(3)O(4) were considered in the calculations and spectral analysis. A cage-like structure in C(3v) point group was identified as the most stable one. The structure is formed by fusing three M(2)O(2) fragments together, each sharing two O-M bonds with others. The ground electronic state of the neutral clusters is (2)A(1) with the unpaired electron being largely a metal-based s character. Ionization of the (2)A(1) state yields a (1)A(1) ion state in a similar geometry to the neutral cluster. The AIEs of the clusters are 4.4556 (6), 4.0586(6), and 3.4750(6) eV for M = Sc, Y, and La, respectively. The observed vibrational modes of the cations include metal-oxygen stretching, metal triangle breathing, and oxygen-metal-oxygen rocking in the frequency range of 200-800 cm(-1).

Electronic states and spin-orbit splitting of lanthanum dimer.

Lanthanum dimer (La(2)) was studied by mass-analyzed threshold ionization (MATI) spectroscopy and a series of multi-configuration ab initio calculations. The MATI spectrum exhibits three band systems originating from ionization of the neutral ground electronic state, and each system shows vibrational frequencies of the neutral molecule and singly charged cation. The three ionization processes are La(2)(+) (a(2)∑(g)(+)) ← La(2) (X(1)∑(g)(+)), La(2)(+) (b(2)Π(3/2, u)) ← La(2) (X(1)∑(g)(+)), and La(2)(+) (b(2)Π(1/2, u)) ← La(2) (X(1)∑(g)(+)), with the ionization energies of 39,046, 40,314, and 40,864 cm(-1), respectively. The vibrational frequency of the X(1)Σ(g)(+) state is 207 cm(-1), and those of the a(2)Σ(g)(+), b(2)Π(3/2, u) and b(2)Π(1/2, u) are 235.7, 242.2, and 240 cm(-1). While X(1)Σ(g)(+) is the ground state of the neutral molecule, a(2)Σ(g (+) and b(2)Π(u) are calculated to be the excited states of the cation. The spin-orbit splitting in the b(2)Π(u) ion is 550 cm(-1). An X(4)Σ(g)(-) state of La(2)(+) was predicted by theory, but not observed by the experiment. The determination of a singlet ground state of La(2) shows that lanthanum behaves differently from scandium and yttrium.

Low-temperature chemistry in helium droplets: reactions of aluminum atoms with O2 and H2O.

The doping of He droplets by Al atoms and their reactions with H(2)O and O(2) at T = 0.37 K was investigated. It was found that at high doping concentrations, the incorporated Al atoms do not aggregate to form clusters. They rather remain as separated atoms inside of the He droplets. Mass spectrometry and the recently developed depletion method have been applied to study the reactions. It was found that single Al atoms react with single O(2) molecules. The dominant product of this reaction occurring inside of the He droplets is AlO(2). The reaction between Al and O(2) clusters has also been detected. The Al clusters react with single H(2)O molecules or clusters. While single Al atoms react with H(2)O clusters, no reaction of single Al atoms with a single water molecule was found.

High-resolution electron spectroscopy, preferential metal-binding sites, and thermochemistry of lithium complexes of polycyclic aromatic hydrocarbons.

Polycyclic aromatic hydrocarbons are model systems for studying the mechanisms of lithium storage in carbonaceous materials. In this work, Li complexes of naphthalene, pyrene, perylene, and coronene were synthesized in a supersonic metal-cluster beam source and studied by zero-electron-kinetic-energy (ZEKE) electron spectroscopy and density functional theory calculations. The adiabatic ionization energies of the neutral complexes and frequencies of up to nine vibrational modes in the singly charged cations were determined from the ZEKE spectra. The metal-ligand bond energies of the neutral complexes were obtained from a thermodynamic cycle. Preferred Li∕Li(+) binding sites with the aromatic molecules were determined by comparing the measured spectra with theoretical calculations. Li and Li(+) prefer the ring-over binding to the benzene ring with a higher π-electron content and aromaticity. Although the ionization energies of the Li complexes show no clear correlation with the size of the aromatic molecules, the metal-ligand bond energies increase with the extension of the π-electron network up to perylene, then decrease from perylene to coronene. The trends in the ionization and metal-ligand bond dissociation energies of the complexes are discussed in terms of the orbital energies, local quadrupole moments, and polarizabilities of the free ligands and the charge transfer between the metal atom and aromatic molecules.

Oxidative reactions of silicon atoms and clusters at ultralow temperature in helium droplets.

The reaction between Si and O(2) was studied in liquid He droplets at low temperature (T = 0.37 K) by monitoring the energy release during the reaction. Additionally, the reactions of Si atoms and clusters with the oxidation agents H(2)O and O(2) have been studied by mass spectrometry. It was found that Si atoms react fast with O(2) molecules. On the other hand, Si atoms and clusters do not react with H(2)O molecules. The energy released during the chemical reaction leads to the ejection of the products from small He droplets. In contrast, large He droplets (N(He) > 20000) are capable of keeping part of the reaction products in their interior. The observation of SiO(2) products with the mass spectrometer reveals that the He droplet can stabilize intermediate products in the exit channel.

Ultra-low-temperature reactions of Mg atoms with O2 molecules in helium droplets.

The reaction of magnesium atoms and clusters with oxygen molecules has been investigated in liquid helium droplets at T = 0.37 K. The energy released during the reaction predominantly leads to the ejection of the reaction products out of the He droplets. The product molecules Mg(2)O, Mg(2)O(2), Mg(3)O, Mg(3)O(2), and Mg(4)O(2) were detected by mass spectrometry. With more than one Mg atom picked up per He droplet, chemiluminescence (CL) light could be detected. This CL results from electronically and vibrationally excited reaction products (Mg(n)O(2), n > or = 2) which left the He droplets. For large He droplets with diameter d > 13 nm, the intensity of the CL light decreases linearly with increasing He droplet diameter. No evidence for chemical reaction was found for d > 50 nm. A considerable time delay between chemical reaction and light emission was observed. It was found that the chemical reaction is unexpectedly fast and has a first-order reaction rate larger than 5 x 10(4) s(-1).

High-resolution electron spectroscopy and structures of lithium-nucleobase (adenine, uracil, and thymine) complexes.

Li complexes of adenine, uracil, and thymine were produced by laser vaporization of rods made of Li and nucleobase powders in a metal-cluster beam source and studied by pulsed-field-ionization zero-electron-kinetic-energy (ZEKE) spectroscopy and density functional theory calculations. The ZEKE measurements determined the adiabatic ionization energies of the three neutral complexes and frequencies of several vibrational modes for the metal-adenine and -uracil ions. The measured spectra were compared with spectral simulations to determine the preferred metal binding sites. For adenine, the most stable structure is formed by Li/Li(+) bidentately binding to both the N7 atom of the imidazole ring and the NH(2) group of the pyrimidine ring. For uracil and thymine, the ideal site for Li/Li(+) coordination is the O4 atom. Although it has only a small effect on the geometries of uracil and thymine, lithium coordination forces the rotation of the NH(2) group out of the adenine plane. The adiabatic ionization energies of the three complexes follow the trend of uracil (33910+/-5 cm(-1))>thymine (33386+/-5 cm(-1))>adenine (32240+/-5 cm(-1)), whereas their metal-ligand bond dissociation energies are about the same, (92-97) +/-6 kJ mol(-1). For all three complexes, the neutral bond energies are smaller than those of the corresponding ions due to a weaker electrostatic interaction and stronger electron repulsion.

Binding sites, rotational conformers, and electronic states of Sc-C6H5X (X = F, CH3, OH, and CN) probed by pulsed-field-ionization electron spectroscopy.

Scandium (Sc) complexes of fluorobenzene (C(6)H(5)F), toluene (C(6)H(5)CH(3)), phenol (C(6)H(5)OH), and benzonitrile (C(6)H(5)CN) are produced in a laser-vaporization molecular beam source. These complexes are studied with pulsed-field-ionization zero-electron-kinetic-energy (ZEKE) spectroscopy and density functional theory calculations. Adiabatic ionization energies and low-frequency metal-ligand and ligand-based vibrational modes are measured from the ZEKE spectra. Metal binding sites and strengths and electronic states are obtained by comparing the ZEKE spectra with the theoretical calculations. The ionization energies of Sc-C(6)H(5)X (X = F, CH(3), OH, and CN) follow the trend of CN > F > OH > CH(3), whereas the bond energies are in the order of CN > CH(3) approximately OH > F. The metal-ligand stretching frequency of Sc(+)-C(6)H(5)CN is nearly twice as those of the other three complexes. All neutral complexes are in low-spin doublet ground states and singly-charged cations are in singlet states. The preferred Sc binding site in these complexes are the phenyl ring with X = F, CH(3), and OH and the nitrile group with CN. For the phenol complex, two rotational conformers are identified in different OH orientations.

High-resolution electron spectroscopy and sigma/pi structures of M(pyridine) and M+(pyridine) (M = Li, Ca, and Sc) complexes.

Metal-pyridine (metal = Li, Ca, and Sc) complexes are produced in laser-vaporization molecular beams and studied by pulsed-field-ionization zero-electron-kinetic-energy (ZEKE) spectroscopy and theoretical calculations. Both sigma and pi structures are considered for the three complexes by theory, and preferred structures are determined by the combination of the ZEKE spectra and calculations. The Li and Ca complexes prefer a sigma bonding mode, whereas the Sc complex favors a pi mode. Adiabatic ionization energies and metal-ligand vibrational frequencies are determined from the ZEKE spectra. Metal-ligand bond dissociation energies of the neutral complexes are obtained from a thermodynamic cycle. The ionization energies follow the trend of Li-pyridine (32,460 cm(-1)) < Ca-pyridine (39,043 cm(-1)) < Sc-pyridine (42,816 cm(-1)), whereas the bond energies are in the order of Ca-pyridine (27.0 kJ mol(-1)) < Li-pyridine (49.1 kJ mol(-1)) < Sc-pyridine (110.6 kJ mol(-1)). The different bonding modes between the main group metals and transition element are discussed in terms of Sc 3d orbital involvement. The bond energy differences between the Li and Ca metals are explained by the number of valence s electrons and the size of the metal atoms.

Pulsed-field ionization photoelectron and IR-UV resonant photoionization spectroscopy of Al-thymine.

Al-thymine (Al-C(4)H(3)N(2)O(2)CH(3)) is produced by laser vaporization of a rod made of Al and thymine powders in a molecular beam and studied by single-photon pulsed-field ionization-zero electron kinetic energy (ZEKE) photoelectron and IR-UV resonant two-photon ionization spectroscopy and density functional theory calculations. The ZEKE experiment determines the adiabatic ionization energy of the neutral complex and 22 vibrational modes for the corresponding ion with frequencies below 2000 cm(-1). The IR-UV photoionization experiment measures two N-H and three C-H stretches for the neutral species. The theoretical calculations predict a number of low-energy isomers with Al binding to single oxygen or adjacent oxygen and nitrogen atoms of thymine. Among these isomers, the structure with Al binding to the O4 atom of the diketo tautomer is predicted to be the most stable one by the theory and is probed by both ZEKE and IR-UV measurements. This work presents the first application of the IR-UV resonant ionization to metal-organic molecule systems. Like ZEKE spectroscopy, the IR-UV photoionization technique is sensitive for identifying isomeric structures of metal association complexes.