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1.
Preprint in English | medRxiv | ID: ppmedrxiv-22281343

ABSTRACT

BackgroundDespite lower circulation of influenza virus throughout 2020-2022 during the COVID-19 pandemic, seasonal influenza vaccination has remained a primary tool to reduce influenza-associated illness and death. The relationship between the decision to receive a COVID-19 vaccine and/or an influenza vaccine is not well understood. MethodsWe assessed predictors of receipt of 2021-2022 influenza vaccine in a secondary analysis of data from a case-control study enrolling individuals who received SARS-CoV-2 testing. We used mixed effects logistic regression to estimate factors associated with receipt of seasonal influenza vaccine. We also constructed multinomial adjusted marginal probability models of being vaccinated for COVID-19 only, seasonal influenza only, or both as compared with receipt of neither vaccination. ResultsAmong 1261 eligible participants recruited between 22 October 2021 - 22 June 2022, 43% (545) were vaccinated with both seasonal influenza vaccine and [≥]1 dose of a COVID-19 vaccine, 34% (426) received [≥]1 dose of a COVID-19 vaccine only, 4% (49) received seasonal influenza vaccine only, and 19% (241) received neither vaccine. Receipt of [≥]1 COVID-19 vaccine dose was associated with seasonal influenza vaccination (adjusted odds ratio [aOR]: 3.72; 95% confidence interval [CI]: 2.15-6.43); this association was stronger among participants receiving [≥]1 COVID-19 booster dose (aOR=16.50 [10.10- 26.97]). Compared with participants testing negative for SARS-CoV-2 infection, participants testing positive had lower odds of receipt of 2021-2022 seasonal influenza vaccine (aOR=0.64 [0.50-0.82]). ConclusionsRecipients of a COVID-19 vaccine were more likely to receive seasonal influenza vaccine during the 2021-2022 season. Factors associated with individuals likelihood of receiving COVID-19 and seasonal influenza vaccines will be important to account for in future studies of vaccine effectiveness against both conditions. Participants who tested positive for SARS-CoV-2 in our sample were less likely to have received seasonal influenza vaccine, suggesting an opportunity to offer influenza vaccination before or after a COVID-19 diagnosis.

2.
Preprint in English | medRxiv | ID: ppmedrxiv-21255135

ABSTRACT

BackgroundEstimates of COVID-19 vaccine effectiveness under real-world conditions, and understanding of barriers to uptake, are necessary to inform vaccine rollout. MethodsWe enrolled cases (testing positive) and controls (testing negative) from among the population whose SARS-CoV-2 molecular diagnostic test results from 24 February-29 April 2021 were reported to the California Department of Public Health. Participants were matched on age, sex, and geographic region. We assessed participants self-reported history of COVID-19 vaccine receipt (BNT162b2 and mRNA-1273). Participants were considered fully vaccinated two weeks after second dose receipt. Among unvaccinated participants, we assessed willingness to receive vaccination, when eligible. We measured vaccine effectiveness (VE) via the matched odds ratio of prior vaccination, comparing cases with controls. ResultsWe enrolled 1023 eligible participants aged [≥]18 years. Among 525 cases, 71 (13.5%) received BNT162b2 or mRNA-1273; 20 (3.8%) were fully vaccinated with either product. Among 498 controls, 185 (37.1%) received BNT162b2 or mRNA-1273; 86 (16.3%) were fully vaccinated with either product. Two weeks after second dose receipt, VE was 86.8% (95% confidence interval: 68.6-94.7%) and 85.6% (69.1-93.9%) for BNT162b2 and mRNA-1273, respectively. Fully vaccinated participants receiving either product experienced 91.3% (79.7-96.3%) and 68.3% (28.5-86.0%) VE against symptomatic and asymptomatic infection, respectively. Among unvaccinated participants, 42.4% (159/375) residing in rural regions and 23.8% (67/281) residing in urban regions reported hesitancy to receive COVID-19 vaccination. ConclusionsAuthorized mRNA vaccines are effective at reducing documented SARS-CoV-2 infections within the general population of California. Vaccine hesitancy presents a barrier to reaching coverage levels needed for herd immunity. Brief pointsO_LIVaccination is preventing documented SARS-CoV-2 infection in California, with 68% and 91% effectiveness against asymptomatic and symptomatic infection, respectively. C_LIO_LIVaccine effectiveness was equivalent for BNT126b2 and mRNA-1273. C_LIO_LIOnly 66% of unvaccinated participants were willing to receive the vaccine when eligible. C_LI

3.
Preprint in English | medRxiv | ID: ppmedrxiv-20248894

ABSTRACT

As essential personnel, United States farmworkers have continued working in-person throughout the COVID-19 pandemic. We undertook prospective surveillance of SARS-CoV-2 infection and antibody prevalence among farmworkers in Californias Salinas Valley from 15 June to 30 November, 2020. Over this period, we observed 22.1% (1514/6864) positivity for current SARS-CoV-2 by nucleic acid detection among farmworkers tested at federally-qualified migrant and community health clinics, as compared to 17.2% (1255/7305) among other adults from the same communities (risk ratio, 1.29; 95% confidence interval, 1.20-1.37). In a nested study enrolling 1,115 farmworkers, prevalence of current infection was 27.7% among farmworkers reporting [≥]1 potential COVID-19 symptom, and 7.2% among farmworkers without symptoms (adjusted odds ratio 4.17; 2.86-6.09). Prevalence of anti-SARS-CoV-2 IgG antibodies increased from 10.5% (6.0-18.4%) between 16 July-31 August to 21.2% (16.6-27.4%) between 1-30 November. The high observed prevalence of infection among farmworkers underscores the need for vaccination and other preventive interventions.

4.
Preprint in English | medRxiv | ID: ppmedrxiv-20169797

ABSTRACT

BackgroundLarge-scale school closures have been implemented worldwide to curb the spread of COVID-19. However, the impact of school closures and re-opening on epidemic dynamics remains unclear. MethodsWe simulated COVID-19 transmission dynamics using an individual-based stochastic model, incorporating social-contact data of school-aged children during shelter-in-place orders derived from Bay Area (California) household surveys. We simulated transmission under observed conditions and counterfactual intervention scenarios between March 17-June 1, and evaluated various fall 2020 K-12 reopening strategies. FindingsBetween March 17-June 1, assuming children <10 were half as susceptible to infection as older children and adults, we estimated school closures averted a similar number of infections (13,842 cases; 95% CI: 6,290, 23,040) as workplace closures (15,813; 95% CI: 9,963, 22,617) and social distancing measures (7,030; 95% CI: 3,118, 11,676). School closure effects were driven by high school and middle school closures. Under assumptions of moderate community transmission, we estimate that fall 2020 school reopenings will increase symptomatic illness among high school teachers (an additional 40.7% expected to experience symptomatic infection, 95% CI: 1.9, 61.1), middle school teachers (37.2%, 95% CI: 4.6, 58.1), and elementary school teachers (4.1%, 95% CI: -1.7, 12.0). Results are highly dependent on uncertain parameters, notably the relative susceptibility and infectiousness of children, and extent of community transmission amid re-opening. The school-based interventions needed to reduce the risk to fewer than an additional 1% of teachers infected varies by grade level. A hybrid-learning approach with halved class sizes of 10 students may be needed in high schools, while maintaining small cohorts of 20 students may be needed for elementary schools. InterpretationMultiple in-school intervention strategies and community transmission reductions, beyond the extent achieved to date, will be necessary to avoid undue excess risk associated with school reopening. Policymakers must urgently enact policies that curb community transmission and implement within-school control measures to simultaneously address the tandem health crises posed by COVID-19 and adverse child health and development consequences of long-term school closures. FundingJVR, JRH, QC, PAC, SP, AKH, CMH, and KC were supported in part by National Science Foundation grant no. 2032210, National Institutes of Health grants nos. R01AI125842, R01TW010286 and R01AI148336, and by the University of California Multicampus Research Programs and Initiatives award # 17-446315. JAL received support from the Berkeley Population Center (grant number P2CHD073964 from the National Institute of Child Health & Human Development, National Institutes of Health). Research in ContextO_ST_ABSEvidence before this studyC_ST_ABSGiven the urgent need to enact quick public health interventions to curb transmission of SARS-CoV-2, large-scale school closures were implemented globally. We searched the terms "school", "children", "closure", "coronavirus", and "COVID-19" in PubMed to assess the current evidence evaluating the role of school closures in mitigating SARS-CoV-2 transmission. Data motivating the decision to close schools remained largely limited to experiences with influenza outbreaks, where children are highly susceptible to infection, are key drivers of transmission, and experience severe outcomes. At the time of writing, no modeling studies to our knowledge have quantified the net impact of COVID-19 related school closures in the United States, and observational studies that documented decreases in COVID-19 incidence associated with statewide school closures are subject to confounding by other concurrently implemented non-pharmaceutical interventions. Further, the scientific consensus remains fragmented in its understanding of key epidemiological parameters, namely the relative susceptibility and infectiousness of children compared to adults, exacerbating uncertainties around the risks of opening schools. As policymakers weigh the negative consequences of school closures on child health and development against the risks of reopening, it becomes critical to discern the range of potential impacts of school reopenings on the COVID-19 epidemic accounting for uncertainty in epidemiological parameters and plausible strategies for risk mitigation. Added value of this studyThis study uses an individual-based transmission model parameterized with contact patterns we derived from a web-based contact survey administered to Bay Area (California) households with children during school closures to advance the understanding of the relative impact of Bay Area spring 2020 school closures compared to other non-pharmaceutical interventions, and projects the potential impact of school reopening strategies in the fall 2020 semester. Within the context of our model, we found that school closures averted a similar number of cases as workplace closures in spring 2020, with most of the averted cases attributable to high school closures. We found that COVID-19 risks associated with reopening schools in fall 2020 are highly dependent on the relative susceptibility of children and the level of community transmission at the time of reopening. Strategies necessary to reduce school transmission such that fewer than an additional 1% of teachers would be infected varied across school divisions. Safely reopening high schools may require combining multiple strict contact reduction measures, including staggering school days, halving class sizes, or maintaining small, stable cohorts, while safely reopening elementary schools may be achieved with a more limited set of interventions, including use of stable cohorts and masks. Implications of all the available evidenceUnder plausible assumptions regarding the susceptibility and infectiousness of school-aged children and teenagers, this study highlights heterogeneity of COVID-19 risks, and necessary mitigation strategies, associated with reopening across levels of schooling. It also highlights the urgency of resolving uncertain parameters, especially those pertaining to the relative susceptibility and infectiousness of children. Research is needed to quantify the role of children in transmission of COVID-19 in schools or similar settings to enumerate the risk of school-based outbreaks, particularly as transmission remains high in many regions of the United States. To balance both the adverse long-term consequence of school closures on child development and concerns about safe reopening, policy makers must quickly devote resources to ensure schools that choose to reopen amid uncertain evidence can adopt and adhere to strict infection, prevention, and control strategies that are critical to ensuring students, teachers, and community members remain healthy.

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