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1.
Enzyme Microb Technol ; 138: 109554, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32527524

ABSTRACT

Overexpression of a novel hydantoinase (hyuH) from P. aeruginosa (MCM B-887) in E. coli yielded optically pure carbamoyl amino acids. The use of optically pure carbamoyl amino acids as substrates facilitates the synthesis of non-proteinogenic amino acids. The enzyme hyuH shared a maximum of 92 % homology with proven hydantoinase protein sequences from the GenBank database, highlighting its novelty. Expression of hydantoinase gene was improved by >150 % by overexpressing it as a fusion protein in specialized E. coli CODON + host cells, providing adequate machinery for effective translation of the GC-rich gene. The presence of distinct residues in the substrate binding and active site of MCM B-887 hydantoinase enzyme explained its unique and broad substrate profile desirable for industrial applications. The purified enzyme, with a specific activity of 53U/mg of protein, was optimally active at 42 °C and pH 9.0 with a requirement of 2 mM Mn2+ ions. Supplementation of 500 mM of Na-glutamate enhanced the thermostability of the enzyme by more than 200 %.


Subject(s)
Amidohydrolases/metabolism , Amino Acids/biosynthesis , Bacterial Proteins/metabolism , Pseudomonas aeruginosa/enzymology , Amidohydrolases/chemistry , Amidohydrolases/genetics , Amidohydrolases/isolation & purification , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Catalytic Domain , Escherichia coli/genetics , Escherichia coli/metabolism , Hydrogen-Ion Concentration , Manganese , Models, Molecular , Phylogeny , Pseudomonas aeruginosa/classification , Pseudomonas aeruginosa/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Stereoisomerism , Substrate Specificity , Temperature
2.
Life Sci Space Res (Amst) ; 12: 39-50, 2017 Feb.
Article in English | MEDLINE | ID: mdl-28212707

ABSTRACT

Red clays of Central Indian Basin (CIB) under influence of trace of Rodriguez Triple Junction exhibited chemoautotrophy, low temperature hydrothermal alterations and photoautotrophic potential. Seamount flank TVBC-08, hosting such signatures revealed dominance of aerobic anoxygenic phototroph Erythrobacter, with 93% of total 454 pyrosequencing tags. Subsequently, enrichments for both aerobic (Erythrobacter) and anaerobic anoxygenic phototrophs (green and purple sulphur bacteria) under red and white LED light illumination, with average irradiance 30.66Wm-2, were attempted for three red-clay sediment cores. Successful enrichments were obtained after incubation for c.a. 120 days at 4°± 2°C and 25°± 2°C, representing ambient psychrophilic and low temperature hydrothermal alteration conditions respectively. During hydrothermal cooling, a microbial succession from anaerobic chemolithotrophy to oxygenic photoautotrophy through anaerobic/aerobic anoxygenic phototrophic microbes is indicated. Spectral absorbance patterns of the methanol extracted cell pellets showed peaks corresponding to metal sulphide precipitations, the Soret band of chlorosome absorbance by photosystem II and absence of peaks at Qy transition band. Dendritic nano-structures of metal sulphides are common in these sediments and are comparable with other sulphidic paleo-marine Martian analogues. Significant blue and redshifts have been observed for the experimental samples relative to the un-inoculated medium. These observations indicate the propensity of metal-sulphide deposits contributing to chemiluminiscence supporting the growth of phototrophs at least partially, in the otherwise dark abyss. The effects of other geothermal heat and light sources are also under further consideration. The potential of phototrophic microbial cells to exhibit Doppler shift in absorbance patterns is significant towards understanding planetary microbial habitability. Planetary desiccation could considerably influence Doppler effects and consequently spectral detection techniques exo-planetary microbial life.


Subject(s)
Aluminum Silicates/radiation effects , Bacteria/metabolism , Exobiology , Photosynthesis/radiation effects , Phototrophic Processes , Clay , Light , Oceans and Seas , Sulfides/chemistry , Water Microbiology
3.
Bioresour Technol ; 226: 80-88, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27988476

ABSTRACT

Anaerobic digestion is the most cost effective technology for sustainable biogas production from rice straw. Rice straw was subjected to ambient pretreatment with alkali and subsequently digested anaerobically. A dimensional equation was developed to predict the efficacy of alkali treatment in terms of soluble COD. Biomethanation process parameters like temperature, initial pH, particle size, substrate/inoculum ratio, trace element supplementation, C/N ratio and hydraulic retention time were optimized. The highest biogas production under optimized conditions was 514L/kg VS/day (∼59% CH4) from milled rice straw (1mm) pretreated with sodium hydroxide (1% w/v) at ambient temperature for 180min. The digester was operated at 15days HRT at 37°C and neutral pH. C/N ratio was optimized at 25 using urea. Higher biogas yield from rice straw treated with lower concentration of NaOH at ambient temperature may make this process more economical than the previous reports.


Subject(s)
Biofuels , Biotechnology/methods , Methane/biosynthesis , Oryza/chemistry , Sodium Hydroxide/chemistry , Anaerobiosis , Biotechnology/instrumentation , Carbon/metabolism , Hydrogen-Ion Concentration , Hydrolysis , Methane/chemistry , Nitrogen/metabolism , Oryza/metabolism , Plant Shoots/chemistry , Plant Shoots/metabolism , Temperature , Urea/chemistry , Urea/metabolism
4.
Bioresour Technol ; 102(11): 6625-8, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21481588

ABSTRACT

Characterisation of polyhydroxyalkanoate (PHA) film produced by haloalkalitolerant Halomonas campisalis (MCM B-1027) in 14L SS fermenter revealed it to have composition of monomer units, HB:HV as 96:4 as analysed by (1)H NMR indicating the PHA as a co-polymer of PHB-co-PHV, molecular weight by gel permeation chromatography as 2.08 × 10(6), melting temperature 166.51°C, tensile strength 18.8 MPa; two relaxations namely beta transition corresponding to the glass rubber transition and alpha transition corresponding to crystalline relaxation by Dynamic Mechanical Thermal analysis and only one relaxation corresponding to MWS interfacial polarisation with activation energy of 129 kJ/mol by broadband dielectric spectroscopy. Optical microscopic studies showed typical Maltese-cross pattern of spherulites. The PHA film was found to be biodegradable by standard ASTM method as well as by soil burial method. The leak proof polymer bags prepared from the film could be used as a packaging material.


Subject(s)
Halomonas/metabolism , Polyesters/chemical synthesis , Product Packaging , Biodegradation, Environmental , Magnetic Resonance Spectroscopy , Reference Standards , Temperature
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