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1.
Fish Physiol Biochem ; 48(4): 817-838, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35643977

ABSTRACT

The capacity for long-chain polyunsaturated fatty acid (LC-PUFA) biosynthesis activity in a species depends on the enzymatic activities of fatty acyl desaturase (Fads) and elongation of very long-chain fatty acid (Elovl). The miniaturized fish Paedocypris micromegethes is a developmentally truncated cyprinid living in highly acidic water conditions in tropical peat swamps. The capacity for LC-PUFA biosynthesis in this species, which has a reduced genome size, is unknown. A high-quality de novo transcriptome assembly enabled the identification of a putative Fads2 and four Elovl. The Fads2 was verified as a P. micromegethes Fads2 ortholog with in vitro Δ5 and Δ6 activities. The Elovl sequences were established as an Elovl5, Elovl2, and two Elovl4 paralogs, namely Elovl4a and Elovl4b. These Elovl enzymes, mainly Elovl5 and Elovl2, fulfill the necessary C18, C20, and C22 PUFA elongation steps for LC-PUFA biosynthesis. Collectively, these results validate the presence of a complete repertoire of LC-PUFA biosynthesis enzymes in a peat swamp miniatured freshwater fish.


Subject(s)
Cyprinidae , Cypriniformes , Animals , Cyprinidae/metabolism , Cypriniformes/metabolism , Fatty Acid Desaturases/genetics , Fatty Acid Elongases/genetics , Fatty Acids, Unsaturated/metabolism , Fish Proteins/genetics , Fish Proteins/metabolism , Soil
2.
Aquac Nutr ; 2022: 7138012, 2022.
Article in English | MEDLINE | ID: mdl-36860466

ABSTRACT

Dietary lipid manipulation in the feed of commercially cultured finfish is used not only to improve production and culture but also to enhance their reproductive performances. The inclusion of lipid in broodstock diet positively affects growth, immunological responses, gonadogenesis, and larval survival. In this review, existing literature on the importance of freshwater finfish species to aquaculture and the inclusion of dietary lipid compounds in freshwater fish feed to accelerate the reproduction rate is being summarized and discussed. Although lipid compounds have been confirmed to improve reproductive performance, only a few members of the most economically important species have reaped benefits from quantitative and qualitative lipid studies. There is a knowledge gap on the effective inclusion and utilization of dietary lipids on gonad maturation, fecundity, fertilization, egg morphology, hatching rate, and consequently, larval quality contributing to the survival and good performance of freshwater fish culture. This review provides a baseline for potential future research for optimizing dietary lipid inclusion in freshwater broodstock diets.

3.
Genes (Basel) ; 12(8)2021 08 23.
Article in English | MEDLINE | ID: mdl-34440461

ABSTRACT

Elongation of very long-chain fatty acid (Elovl) proteins are key enzymes that catalyze the rate-limiting step in the fatty acid elongation pathway. The most recently discovered member of the Elovl family, Elovl8, has been proposed to be a fish-specific elongase with two gene paralogs described in teleosts. However, the biological functions of Elovl8 are still to be elucidated. In this study, we showed that in contrast to previous findings, elovl8 is not unique to teleosts, but displays a rather unique and ample phylogenetic distribution. For functional determination, we generated elovl8a (elovl8a-/-) and elovl8b (elovl8b-/-) zebrafish using CRISPR/Cas9 technology. Fatty acid composition in vivo and zebrafish liver cell experiments suggest that the substrate preference of Elovl8 overlapped with other existing Elovl enzymes. Zebrafish Elovl8a could elongate the polyunsaturated fatty acids (PUFAs) C18:2n-6 and C18:3n-3 to C20:2n-6 and C20:3n-3, respectively. Along with PUFA, zebrafish Elovl8b also showed the capacity to elongate C18:0 and C20:1. Gene expression quantification suggests that Elovl8a and Elovl8b may play a potentially important role in fatty acid biosynthesis. Overall, our results provide novel insights into the function of Elovl8a and Elovl8b, representing additional fatty acid elongases not previously described in chordates.


Subject(s)
Evolution, Molecular , Fatty Acid Elongases/genetics , Fatty Acids/genetics , Fish Proteins/genetics , Animals , CRISPR-Cas Systems/genetics , Cloning, Molecular , Fatty Acids/biosynthesis , Fatty Acids, Unsaturated/genetics , Fatty Acids, Unsaturated/metabolism , Gene Expression Regulation, Enzymologic/genetics , Lipogenesis/genetics , Zebrafish/genetics
4.
Fish Physiol Biochem ; 46(4): 1349-1359, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32239337

ABSTRACT

Fish are a major source of beneficial n-3 LC-PUFA in human diet, and there is considerable interest to elucidate the mechanism and regulatory aspects of LC-PUFA biosynthesis in farmed species. Long-chain polyunsaturated fatty acid (LC-PUFA) biosynthesis involves the activities of two groups of enzymes, the fatty acyl desaturase (Fads) and elongase of very long-chain fatty acid (Elovl). The promoters of elovl5 elongase, which catalyses the rate-limiting reaction of elongating polyunsaturated fatty acid (PUFA), have been previously described and characterized from several marine and diadromous teleost species. We report here the cloning and characterization of elovl5 promoter from two freshwater fish species, the carnivorous snakehead fish (Channa striata) and zebrafish. Results show the presence of sterol-responsive elements (SRE) in the core regulatory region of both promoters, suggesting the importance of sterol regulatory element-binding protein (Srebp) in the regulation of elovl5 for both species. Mutagenesis luciferase and electrophoretic mobility shift assays further validate the role of SRE for basal transcriptional activation. In addition, several Sp1-binding sites located in close proximity with SRE were present in the snakehead promoter, with one having a potential synergy with SRE in the regulation of elovl5 expression. The core zebrafish elovl5 promoter fragment also directed in vivo expression in the yolk syncytial layer of developing zebrafish embryos.


Subject(s)
Acetyltransferases/physiology , Fishes/physiology , Sp1 Transcription Factor/physiology , Sterol Regulatory Element Binding Proteins/physiology , Transcriptional Activation/physiology , Zebrafish Proteins/physiology , Zebrafish/physiology , Animals , Cloning, Molecular , DNA/genetics , DNA/isolation & purification , Luciferases/genetics , Mutagenesis, Site-Directed , Promoter Regions, Genetic , Transfection
5.
J Agric Food Chem ; 68(14): 4116-4130, 2020 Apr 08.
Article in English | MEDLINE | ID: mdl-32186869

ABSTRACT

While the capacity for long-chain polyunsaturated fatty acid (LC-PUFA) biosynthesis has been elucidated in vertebrates and several invertebrate phyla, the comparative knowledge in crustaceans remains vague. A key obstacle in mapping the full spectrum of LC-PUFA biosynthesis in crustacean is the limited evidence of the functional activities of enzymes involved in desaturation or elongation of polyunsaturated fatty acid substrates. In this present study, we report on the cloning and functional characterization of two Elovl elongases from the orange mud crab, Scylla olivacea. Sequence and phylogenetic analysis suggest these two Elovl as putative Elovl4 and Elovl6, respectively. Using the recombinant expression system in Saccharomyces cerevisiae, we demonstrate the elongation capacity for C18-C22 PUFA substrates in the S. olivacea Elovl4. The S. olivacea Elovl6 elongated saturated fatty acids, monounsaturated fatty acids, and interestingly, C18-C20 PUFA. Taken together, both Elovl fulfill the elongation steps required for conversion of C18 PUFA to their respective LC-PUFA products. Elovl4 is expressed mainly in the hepatopancreas and gill tissues, while Elovl6 is predominant in digestive tissues. The mRNA expression of both enzymes was higher in mud crabs fed with vegetable oil-based diets. Tissue fatty acid composition also showed the existence of LC-PUFA biosynthesis intermediate products in tissues expressing these two elongases. In summary, we report here two novel Elovl with PUFA elongating activities in a marine brachyuran. This will contribute significantly to the understanding of the LC-PUFA biosynthesis pathway in crustaceans and advance the development of aquafeed for intensive farming of the mud crab.


Subject(s)
Brachyura/enzymology , Fatty Acid Elongases/metabolism , Fatty Acids, Unsaturated/biosynthesis , Animals , Brachyura/genetics , Cloning, Molecular , Enzyme Activation , Fatty Acid Elongases/genetics , Saccharomyces cerevisiae/genetics , Substrate Specificity
6.
J Fish Biol ; 97(1): 83-99, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32222967

ABSTRACT

The biosynthesis of long-chain polyunsaturated fatty acids (LC-PUFA), a process to convert C18 polyunsaturated fatty acids into eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA) or arachidonic acid (ARA), requires the concerted activities of two enzymes, the fatty acyl desaturase (Fads) and elongase (Elovl). This study highlights the cloning, functional characterisation and tissue expression pattern of a Fads and an Elovl from the Boddart's goggle-eyed goby (Boleophthalmus boddarti), a mudskipper species widely distributed in the Indo-Pacific region. Phylogenetic analysis revealed that the cloned fads and elovl are clustered with other teleost orthologs, respectively. The investigation of the genome of several mudskipper species, namely Boleophthalmus pectinirostris, Periophthalmus schlosseri and Periophthalmus magnuspinnatus, revealed a single Fads2 and two elongases, Elovl5 and Elovl4 for each respective species. A heterologous yeast assay indicated that the B. boddarti Fads2 possessed low desaturation activity on C18 PUFA and no desaturation on C20 and C22 PUFA substrates. In comparison, the Elovl5 showed a wide range of substrate specificity, with a capacity to elongate C18, C20 and C22 PUFA substrates. An amino acid residue that affects the capacity to elongate C22:5n-3 was identified in the B. boddarti Elovl5. Both genes are highly expressed in brain tissue. Among all tissues, DHA is highly concentrated in neuron-rich tissues, whereas EPA is highly deposited in gills. Taken together, the results showed that due to the inability to perform desaturation steps, B. boddarti is unable to biosynthesise LC-PUFA, relying on dietary intake to acquire these nutrients.


Subject(s)
Fatty Acid Desaturases/metabolism , Fatty Acid Elongases/metabolism , Fatty Acids, Unsaturated/biosynthesis , Fish Proteins/metabolism , Perciformes/metabolism , Acetyltransferases/chemistry , Acetyltransferases/genetics , Acetyltransferases/metabolism , Animals , Fatty Acid Desaturases/chemistry , Fatty Acid Desaturases/genetics , Fatty Acid Elongases/chemistry , Fatty Acid Elongases/genetics , Fish Proteins/genetics , Gene Expression Regulation, Enzymologic , Phylogeny , Substrate Specificity
7.
Article in English | MEDLINE | ID: mdl-30831207

ABSTRACT

The capacity of crustaceans to biosynthesise long-chain polyunsaturated fatty acids has yet to be fully defined, due to the lack of evidence on the functional activities of enzymes involved in desaturation or elongation of fatty acid substrates. We report here the cloning and in vitro functional analysis of an elongase from the orange mud crab, Scylla olivacea. Sequence and phylogenetic analysis placed the elovl close to the vertebrate Elovl1 and Elovl7 clade, which is distinct from the other remaining five Elovl families. The elongase was also clustered together with several elongases from crustaceans and insects. This elongase showed activities towards 16:1n-7, and at lower rate, linoleic acid (18:2n-6) and linolenic acid (18:3n-3). To our knowledge this is the first description of a functional enzyme involved in biosynthesis of long-chained polyunsaturated fatty acids in a crustacean species. Expression of the S. olivacea elovl7-like mRNA was prominent in stomach, intestine and gill tissues, due to the need to regulate the permeability of epithelial tissue through modification of fatty acid compositions. The implication of our findings, in terms of ability of Crustacea phylum to biosynthesise polyunsaturated fatty acids is discussed.


Subject(s)
Acetyltransferases , Arthropod Proteins , Brachyura , Fatty Acids, Unsaturated , Gene Expression Regulation, Enzymologic/physiology , Phylogeny , Acetyltransferases/biosynthesis , Acetyltransferases/chemistry , Acetyltransferases/genetics , Animals , Arthropod Proteins/biosynthesis , Arthropod Proteins/chemistry , Arthropod Proteins/genetics , Brachyura/enzymology , Brachyura/genetics , Cloning, Molecular , Fatty Acid Elongases , Fatty Acids, Unsaturated/biosynthesis , Fatty Acids, Unsaturated/genetics , Organ Specificity/physiology
8.
Sci Rep ; 8(1): 3874, 2018 03 01.
Article in English | MEDLINE | ID: mdl-29497119

ABSTRACT

The front-end desaturases (Fads) are rate-limiting enzymes responsible for production of long-chain polyunsaturated fatty acids (LC-PUFA). The full spectrum of the transcriptional regulation of fads is still incomplete, as cloning of fads promoter is limited to a few species. Here, we described the cloning and characterisation of the zebrafish fads2 promoter. Using 5'-deletion and mutation analysis on this promoter, we identified a specific region containing the sterol regulatory element (SRE) which is responsible for the activation of the fads2 promoter. In tandem, two conserved CCAAT boxes were also present adjacent to the SRE and mutation of either of these binding sites attenuates the transcriptional activation of the fads2 promoter. An in vivo analysis employing GFP reporter gene in transiently transfected zebrafish embryos showed that this 1754 bp upstream region of the fads2 gene specifically directs GFP expression in the yolk syncytial layer (YSL) region. This indicates a role for LC-PUFA in the transport of yolk lipids through this tissue layer. In conclusion, besides identifying novel core elements for transcriptional activation in zebrafish fads2 promoter, we also reveal a potential role for fads2 or LC-PUFA in YSL during development.


Subject(s)
Fatty Acid Desaturases/genetics , Zebrafish/embryology , Zebrafish/genetics , Animals , Binding Sites , Cloning, Molecular/methods , Egg Yolk/metabolism , Fatty Acid Desaturases/metabolism , Fatty Acids/genetics , Fatty Acids/metabolism , Fatty Acids, Unsaturated/biosynthesis , Fatty Acids, Unsaturated/genetics , Fish Proteins/genetics , Gene Expression Regulation, Developmental , Genes, Reporter , Giant Cells/metabolism , Promoter Regions, Genetic , Transcriptional Activation , Transgenes
9.
Article in English | MEDLINE | ID: mdl-27421235

ABSTRACT

There is a lack of understanding on how the environment and trophic niche affect the capability of long-chain polyunsaturated fatty acids (LC-PUFA) in freshwater carnivorous teleost. In this present study, we isolated and functionally characterised a fatty acyl desaturase (Fads) from the striped snakehead Channa striata. Sequence comparison and phylogenetic analysis suggested a Fads2 protein that is closely related to previously characterised Fads2 proteins from freshwater carnivorous and marine herbivorous fish species. We further demonstrated the capacity of Δ6 and Δ5 desaturation activities for this particular desaturase, with highest activities towards the conversion of omega-3 (n-3) polyunsaturated fatty acids (PUFA). Low Δ4 desaturation activity was also detected, although the significance of this at a physiological level remains to be studied. The expression of this striped snakehead Δ6/Δ5 fads2 gene was highest in brain, followed by liver and intestine. In liver, diet fortified with high LC-PUFA concentration impeded the expression of Δ6/Δ5 fads2 gene compared to vegetable oil (VO) based diets. The discovery of Δ6/Δ5 Fads2 desaturase here complements the previous discovery of a Δ4 Fads2 desaturase and an Elovl5 elongase, lending proof to the existence of all the required enzymatic machinery to biosynthesise LC-PUFA from C18 PUFA in a freshwater carnivorous species.


Subject(s)
Fatty Acid Desaturases/genetics , Fatty Acid Desaturases/metabolism , Fish Proteins/genetics , Fish Proteins/metabolism , Perciformes/genetics , Perciformes/metabolism , Amino Acid Sequence , Animals , Cloning, Molecular , Delta-5 Fatty Acid Desaturase , Dietary Fats, Unsaturated/administration & dosage , Dietary Fats, Unsaturated/metabolism , Fatty Acids, Unsaturated/administration & dosage , Fatty Acids, Unsaturated/metabolism , Gene Expression Regulation, Enzymologic , Linoleoyl-CoA Desaturase/genetics , Linoleoyl-CoA Desaturase/metabolism , Phylogeny , Sequence Homology, Amino Acid , Tissue Distribution
10.
Fish Physiol Biochem ; 42(4): 1107-22, 2016 Aug.
Article in English | MEDLINE | ID: mdl-26842427

ABSTRACT

Despite the potential of vegetable oils as aquafeed ingredients, a major drawback associated with their utilization is the inferior level of beneficial n-3 long-chain polyunsaturated fatty acids (LC-PUFA). Echium oil (EO), which is rich in stearidonic acid (SDA, 18:4n-3), could potentially improve the deposition of n-3 LC-PUFA as the biosynthesis of LC-PUFA is enhanced through bypassing the rate-limiting ∆6 desaturation step. We report for the first time an attempt to investigate whether the presence of a desaturase (Fads2) capable of ∆4 desaturation activities and an elongase (Elovl5) will leverage the provision of dietary SDA to produce a higher rate of LC-PUFA bioconversion. Experimental diets were designed containing fish oil (FO), EO or linseed oil (LO) (100FO, 100EO, 100LO), and diets which comprised equal mixtures of the designated oils (50EOFO and 50EOLO) were evaluated in a 12-week feeding trial involving striped snakeheads (Channa striata). There was no significant difference in growth and feed conversion efficiency. The hepatic fatty acid composition and higher expression of fads2 and elovl5 genes in fish fed EO-based diets indicate the utilization of dietary SDA for LC-PUFA biosynthesis. Collectively, this resulted in a higher deposition of muscle eicosapentaenoic acid (EPA, 20:5n-3) and docosahexaenoic acid (DHA, 22:6n-3) compared to LO-based diets. Dietary EO improved the ratio of n-3 LC-PUFA to n-6 LC-PUFA in fish muscle, which is desirable for human populations with excessive consumption of n-6 PUFA. This study validates the contribution of SDA in improving the content of n-3 LC-PUFA and the ratio of EPA to arachidonic acid (ARA, 20:4n-6) in a freshwater carnivorous species.


Subject(s)
Echium , Fatty Acid Desaturases/genetics , Fatty Acids, Omega-3/metabolism , Flax , Perciformes/metabolism , Plant Oils/pharmacology , Acetyltransferases/genetics , Animals , Brain/metabolism , Fatty Acid Elongases , Fish Proteins/genetics , Gene Expression Regulation/drug effects , Liver/metabolism , Muscles/metabolism , Perciformes/genetics
11.
Biochim Biophys Acta ; 1851(3): 248-60, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25542509

ABSTRACT

The endogenous production of long-chain polyunsaturated fatty acids (LC-PUFA) in carnivorous teleost species inhabiting freshwater environments is poorly understood. Although a predatory lifestyle could potentially supply sufficient LC-PUFA to satisfy the requirements of these species, the nutrient-poor characteristics of the freshwater food web could impede this advantage. In this study, we report the cloning and functional characterisation of an elongase enzyme in the LC-PUFA biosynthesis pathway from striped snakehead (Channa striata), which is a strict freshwater piscivore that shows high deposition of LC-PUFA in its flesh. We also functionally characterised a previously isolated fatty acyl desaturase cDNA from this species. Results showed that the striped snakehead desaturase is capable of Δ4 and Δ5 desaturation activities, while the elongase showed the characteristics of Elovl5 elongases. Collectively, these findings reveal that striped snakehead exhibits the genetic resources to synthesise docosahexaenoic acid (DHA; 22:6n-3) from eicosapentaenoic acid (EPA; 20:5n-3). Both genes are expressed at considerable levels in the brain and the liver. In liver, both genes were up-regulated by dietary C18 PUFA, although this increase did not correspond to a significant rise in the deposition of muscle LC-PUFA. Brain tissue of fish fed with plant oil diets showed higher expression of fads2 gene compared to fish fed with fish oil-based diet, which could ensure DHA levels remain constant under limited dietary DHA intake. This suggests the importance of DHA production from EPA via the ∆4 desaturation step in order to maintain an optimal reserve of DHA in the neuronal tissues of carnivores.


Subject(s)
Acetyltransferases/metabolism , Docosahexaenoic Acids/biosynthesis , Eicosapentaenoic Acid/biosynthesis , Fatty Acid Desaturases/metabolism , Fish Proteins/metabolism , Perciformes/metabolism , Acetyltransferases/genetics , Amino Acid Sequence , Animals , Brain/metabolism , Carnivory , Cloning, Molecular , Diet , Escherichia coli/genetics , Escherichia coli/metabolism , Fatty Acid Desaturases/genetics , Fatty Acid Elongases , Fish Oils/administration & dosage , Fish Proteins/genetics , Gene Expression Regulation , Liver/metabolism , Molecular Sequence Data , Muscles/metabolism , Organ Specificity , Perciformes/classification , Perciformes/genetics , Phylogeny , Plant Oils/administration & dosage , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment
12.
J Econ Entomol ; 106(5): 2167-76, 2013 Oct.
Article in English | MEDLINE | ID: mdl-24224261

ABSTRACT

Extensive usage and heavy reliance on insecticides have led to the development of insecticide resistance in the German cockroach, Blattella germanica (L.). Six field-collected strains of B. germanica from Singapore were used to investigate resistance to fipronil and dieldrin. The three strains (Boat Quay, Cavenagh Road, and Ghimmoh Road) with greatest resistance to fipronil were subjected to selection with fipronil bait up to the F5 generation. Synergism assay and molecular detection of a target site mutation were used to elucidate the mechanism of fipronil resistance in these strains. With the exception of the Cavenagh Road strain, all parental strains were susceptible to dieldrin. This strain exhibited resistance to dieldrin and fipronil with resistance ratios of 4.1 and 3.0, respectively. Piperonyl butoxide and S,S,S-tributylphosphorotrithioate were antagonistic toward fipronil toxicity in all strains. Bait selection significantly increased fipronil and dieldrin resistance in the three chosen strains, either in topical bioassay or bait evaluations. There was a significant positive relationship [y = (6,852.69 +/- 1,988.37) x - (708.93 +/- 1,226.28), where x = fipronil toxicity and y = dieldrin toxicity] between dieldrin and fipronil resistance levels, indicating significant cross-resistance between the insecticides. High frequencies of individuals possessing the Rdl gene mutation were found in the F5 generation of the three strains selected with fipronil bait. The synergism assays indicated that monooxygenase and esterase were not involved in fipronil resistance in the strains studied herein. The A302S Rdl mutation was the major mechanism contributing to fipronil and dieldrin resistance in these strains.


Subject(s)
Blattellidae/drug effects , Dieldrin/pharmacology , Insecticide Resistance , Insecticides/pharmacology , Pyrazoles/pharmacology , Animals , Blattellidae/genetics , Blattellidae/growth & development , Blattellidae/metabolism , Insect Proteins/genetics , Insect Proteins/metabolism , Male , Mutation , Nymph/drug effects , Nymph/genetics , Nymph/growth & development , Nymph/metabolism , Organothiophosphates/pharmacology , Pesticide Synergists/pharmacology , Piperonyl Butoxide/pharmacology , Receptors, GABA/genetics , Receptors, GABA/metabolism , Selection, Genetic , Sequence Analysis, DNA
13.
Dev Biol ; 363(1): 84-94, 2012 Mar 01.
Article in English | MEDLINE | ID: mdl-22210003

ABSTRACT

Macrophage migration inhibitory factor (MIF) plays versatile roles in the immune system. MIF is also widely expressed during embryonic development, particularly in the nervous system, although its roles in neural development are only beginning to be understood. Evidence from frogs, mice and zebrafish suggests that MIF has a major role as a neurotrophin in the early development of sensory systems, including the auditory system. Here we show that the zebrafish mif pathway is required for both sensory hair cell (HC) and sensory neuronal cell survival in the ear, for HC differentiation, semicircular canal formation, statoacoustic ganglion (SAG) development, and lateral line HC differentiation. This is consistent with our findings that MIF is expressed in the developing mammalian and avian auditory systems and promotes mouse and chick SAG neurite outgrowth and neuronal survival, demonstrating key instructional roles for MIF in vertebrate otic development.


Subject(s)
Ear, Inner/metabolism , Macrophage Migration-Inhibitory Factors/genetics , Nerve Growth Factors/genetics , Zebrafish Proteins/genetics , Zebrafish/genetics , Animals , Cell Differentiation/genetics , Ear, Inner/embryology , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/embryology , Embryo, Nonmammalian/metabolism , Ganglia, Sensory/embryology , Ganglia, Sensory/metabolism , Gene Expression Profiling , Gene Expression Regulation, Developmental/drug effects , Gene Knockdown Techniques , Hair Cells, Auditory/metabolism , Histone Deacetylase Inhibitors/pharmacology , Hydroxamic Acids/pharmacology , Macrophage Migration-Inhibitory Factors/metabolism , Pyrimidines/pharmacology , Receptors, Immunologic/genetics , Reverse Transcriptase Polymerase Chain Reaction , Semicircular Canals/embryology , Semicircular Canals/metabolism , Sensory Receptor Cells/cytology , Sensory Receptor Cells/metabolism , Time Factors , Zebrafish/embryology
14.
Mol Biol Rep ; 39(4): 4823-9, 2012 Apr.
Article in English | MEDLINE | ID: mdl-21956757

ABSTRACT

Teleosts are useful vertebrate model species for understanding copper toxicity due to the dual entry route for copper intake via the gills and intestine. In this present study, we utilized the differential display reverse transcription-polymerase chain reaction to isolate potential novel hepatic genes induced by sublethal copper exposure in the freshwater swordtail fish, Xiphophorus helleri. Full length cloning of a cDNA fragment induced by copper exposure to 1 µg/ml during 24 h resulted in the positive identification of a hepatic ribosomal protein L19 (RPL19) gene. Further characterization of this gene revealed that its transcriptional expression was dependent on dosage and time of copper exposure. This study describes for the first time the involvement of RPL19 in copper toxicity, probably as a result of increase in ribosome synthesis rate to support activities such as cellular protein translation, transcriptional activation and mRNA stabilization during sublethal copper exposure.


Subject(s)
Copper/toxicity , Cyprinodontiformes/genetics , Environmental Exposure , Ribosomal Proteins/genetics , Amino Acid Sequence , Animals , Base Sequence , DNA, Complementary/genetics , Gene Expression Profiling , Gene Expression Regulation/drug effects , Liver/drug effects , Liver/metabolism , Male , Molecular Sequence Data , Phylogeny , RNA, Messenger/genetics , Ribosomal Proteins/chemistry , Ribosomal Proteins/metabolism , Sequence Analysis, DNA , Sequence Homology, Amino Acid
15.
J Ethnopharmacol ; 139(2): 657-63, 2012 Jan 31.
Article in English | MEDLINE | ID: mdl-22193176

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: Swietenia macrophylla or commonly known as big leaf mahogany, has been traditionally used as an antibacterial and antifungal agent. AIM OF THE STUDY: The unwanted problem of antibiotic resistance in many bacterial species advocates the need for the discovery of the new anti-infective drugs. Here, we investigated the anti-infective properties of Swietenia macrophylla with an assay involving lethal infection of Caenorhabditis elegans with the opportunistic human pathogen Pseudomonas aeruginosa. MATERIALS AND METHODS: Using a slow killing assay, Caenorhabditis elegans was challenged with an infective strain of Pseudomonas aeruginosa (PA14). The ability of Swietenia macrophylla seed ethyl acetate extract to promote the survival of infected worms was assessed by comparing the percentage of survival between extract treated and non-treated worm populations. The effect of Swietenia macrophylla towards PA14 growth, Caenorhabditis elegans feeding rate and degree of PA14 colonization in the worm gut was also evaluated. Lastly, using a fluorescent transgenic Caenorhabditis elegans strain and real time PCR, the effect of Swietenia macrophylla on the expression of lys-7, an immune response gene was also investigated. RESULTS: Our results demonstrate the ability of Swietenia macrophylla seed ethyl acetate extract in rescuing Caenorhabditis elegans from fatal PA14 infection. Consequently, we showed that the extract promotes the survival without exhibiting any bactericidal effect or perturbation of Caenorhabditis elegans feeding rate. We also showed that Swietenia macrophylla was able to restore the initially repressed lys-7 level in PA14 infected Caenorhabditis elegans. CONCLUSION: Swietenia macrophylla extract is able to enhance the ability of Caenorhabditis elegans to survive PA14 infection without directly killing the pathogen. We further showed that the extract boosted the expression of a gene pivotal for innate immunity in Caenorhabditis elegans. Collectively, these findings strongly suggest the presence of compounds within Swietenia macrophylla seed that either reduces Pseudomonas aeruginosa virulence and/or enhance host resistance.


Subject(s)
Anti-Bacterial Agents/pharmacology , Caenorhabditis elegans/drug effects , Meliaceae , Plant Extracts/pharmacology , Pseudomonas Infections/drug therapy , Pseudomonas aeruginosa/drug effects , Animals , Animals, Genetically Modified , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , Caenorhabditis elegans/genetics , Caenorhabditis elegans/immunology , Caenorhabditis elegans/microbiology , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , Gene Expression Regulation, Bacterial/drug effects , Immunity, Innate/drug effects , Immunity, Innate/genetics , Meliaceae/chemistry , Microscopy, Fluorescence , Plant Extracts/isolation & purification , Plants, Medicinal , Pseudomonas Infections/immunology , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/immunology , Pseudomonas aeruginosa/pathogenicity , Seeds , Solvents , Time Factors , Up-Regulation , Virulence
16.
Article in English | MEDLINE | ID: mdl-21130179

ABSTRACT

There is very little information on the capacity of freshwater carnivorous fish to biosynthesize highly unsaturated fatty acids (HUFA). The striped snakehead fish (Channa striata) is a carnivorous species cultured inland of several Southeast Asian countries due to its pharmaceutical properties in wound healing enhancement. We described here the full-length cDNA cloning of a striped snakehead fatty acid desaturase (fads), which is responsible for desaturation of unsaturated fatty acids in the HUFA biosynthesis. Bioinformatics analysis reveals a protein coding region with length of 445 amino acids containing all characteristic features of desaturase enzyme, including a cytochrome b5-domain with the heme-binding motif, two transmembrane domains and three histidine-rich regions. The striped snakehead fads amino acid sequence shares high similarity with known fads of other teleosts. The mRNA expression of striped snakehead fads also showed an ontogenic-related increase in expression in 0-20 days after hatch larva. Using ISH, we localized the presence of fads in larva brain, liver and intestinal tissues.


Subject(s)
Fatty Acid Desaturases/genetics , Fish Proteins/genetics , Perciformes/genetics , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Fatty Acid Desaturases/metabolism , Fish Proteins/metabolism , Larva/metabolism , Molecular Sequence Data , Perciformes/growth & development , Perciformes/metabolism , Phylogeny , RNA, Messenger/metabolism , Sequence Homology, Amino Acid
17.
Article in English | MEDLINE | ID: mdl-19272315

ABSTRACT

Prolactin (PRL) has been shown to directly influence parental-care associated behavior in many vertebrate species. The discus fish (Symphysodon aequifasciata) displays extensive parental care behavior through utilization of epidermal mucosal secretion to raise free-swimming fry. Here, we cloned the full-length cDNA sequence of the S. aequifasciata prolactin receptor (dfPRLR) and investigated the mRNA expression pattern in several adult tissues. Bioinformatic analysis showed the dfPRLR shared rather high identity (79 and 67%) with the Nile tilapia PRLR 1 and black seabream PRLR 1, respectively. The presence of dfPRLR in several osmoregulatory tissues including kidney, gill and intestine is consistent with the known role of PRL in mediating hydromineral balance in teleosts. In addition, upregulated expression of PRLR mRNA was observed in skin of parental fish compared to non-parental fish, indicating possibility of a role of the PRL hormonal signaling in regulation of mucus production in relation to parental care behaviour.


Subject(s)
Cichlids/genetics , Gene Expression Profiling , Receptors, Prolactin/genetics , Skin/metabolism , Amino Acid Sequence , Animals , Base Sequence , Cichlids/physiology , Cloning, Molecular , DNA, Complementary/chemistry , DNA, Complementary/genetics , Female , Male , Maternal Behavior/physiology , Molecular Sequence Data , Phylogeny , RNA, Messenger/genetics , RNA, Messenger/metabolism , Receptors, Prolactin/classification , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Up-Regulation
18.
Reprod Biol Endocrinol ; 6: 56, 2008 Nov 24.
Article in English | MEDLINE | ID: mdl-19025614

ABSTRACT

BACKGROUND: Although unsaturated fatty acids such as eicosapentaenoic acid (EPA, C20:5n-3), docosahexaenoic acid (DHA, C22:6n-3) and arachidonic acid (ARA, C20:4n-6), collectively known as the highly unsaturated fatty acids (HUFA), play pivotal roles in vertebrate reproduction, very little is known about their synthesis in the ovary. The zebrafish (Danio rerio) display capability to synthesize all three HUFA via pathways involving desaturation and elongation of two precursors, the linoleic acid (LA, C18:2n-6) and linolenic acid (LNA, C18:3n-3). As a prerequisite to gain full understanding on the importance and regulation of ovarian HUFA synthesis, we described here the mRNA expression pattern of two enzymes; desaturase (fadsd6) and elongase (elovl5), involved in HUFA biosynthesis pathway, in different zebrafish ovarian follicle stages. Concurrently, the fatty acid profile of each follicle stage was also analyzed. METHODS: mRNA levels of fadsd6 and elovl5 in different ovarian follicle stages were determined by semi-quantitative reverse transcription-polymerase chain reaction (RT-PCR) assays. For analysis of the ovarian follicular fatty acid composition, gas chromatography was used. RESULTS: Our results have shown that desaturase displayed significant upregulation in expression during the oocyte maturation stage. Expression of elongase was significantly highest in pre-vitellogenic follicles, followed by maturation stage. Fatty acid composition analysis of different ovarian follicle stages also showed that ARA level was significantly highest in pre-vitellogenic and matured follicles. DHA level was highest in both late vitellogenic and maturation stage. CONCLUSION: Collectively, our findings seem to suggest the existence of a HUFA synthesis system, which could be responsible for the synthesis of HUFA to promote oocyte maturation and possibly ovulation processes. The many advantages of zebrafish as model system to understand folliculogenesis will be useful platform to further elucidate the regulatory and mechanism aspects of ovarian HUFA synthesis.


Subject(s)
Acetyltransferases/biosynthesis , Fatty Acid Desaturases/biosynthesis , Ovarian Follicle/growth & development , RNA, Messenger/metabolism , Animals , Fatty Acid Elongases , Female , Gene Expression Regulation, Developmental , Ovarian Follicle/enzymology , Up-Regulation , Zebrafish
19.
Fish Physiol Biochem ; 34(2): 129-38, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18649030

ABSTRACT

Copper is one of the major heavy metal pollutants found in the aquatic environment. Therefore, it is important for determining the genes that play a key role in copper metabolism in aquatic organisms. This study, thus, aimed to identify a new copper-inducible gene in swordtail fish, Xiphophorus helleri. Using ACP-based RT-PCR coupled with RLM-RACE, we cloned Wap65, a mammalian homologue of hemopexin gene. The gene exhibits high identity at amino acid levels with the Wap65 gene of other fish species (42-68%) and mammalian hemopexin gene (35-37%). In addition, ten cysteine and two histidine residues are conserved in the swordtail fish Wap65 gene. These cysteine residues are vital for structural integrity, and histidine residues provide high binding affinity towards heme. As revealed by RT-PCR, the gene was upregulated in swordtail fish that were exposed to copper in a dose- and time-dependent manner. Therefore, the identification of Wap65, a mammalian homologue of hemopexin, as a new copper-inducible gene will provide greater insight into the role of this gene in copper metabolism.


Subject(s)
Copper/pharmacology , Fish Proteins/genetics , Gene Expression Regulation/drug effects , Hemopexin/genetics , Killifishes/genetics , Amino Acid Sequence , Animals , Fish Proteins/chemistry , Hemopexin/chemistry , Humans , Molecular Sequence Data , Sequence Alignment
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