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1.
J Appl Microbiol ; 127(5): 1349-1361, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31432571

ABSTRACT

AIMS: An extensive source investigation was conducted on a dairy farm with neurolisteriosis and subclinical mastitis cases to identify infection source and potential transmission routes of Listeria monocytogenes. METHODS AND RESULTS: A total of 36 L. monocytogenes isolates were obtained from animal clinical cases (neurolisteriosis and udder infection) and the farm environment (silage, faeces, water). Isolates were typed using pulsed-field gel electrophoresis (PFGE) and whole-genome sequencing (WGS). Their virulence potential was assessed using the gentamicin protection assay and WGS-based identification of virulence genes. PFGE and WGS revealed a high genetic diversity of L. monocytogenes. An epidemiological link was confirmed for isolates from (i) several subclinical mastitis cases, (ii) silage and subclinical mastitis cases and (iii) different water sources. The neurolisteriosis isolate belonged to clonal complex (CC) 1, but infection source was not identified. A high occurrence (9/47 cows; 19·1%) of subclinical mastitis was observed with isolates belonging to CC2, CC4 and CC11. CONCLUSIONS: The dairy farm environment was contaminated with diverse L. monocytogenes strains, including genotypes associated with human disease. Several isolates harboured genetic determinants associated with increased infectious potential in humans. SIGNIFICANCE AND IMPACT OF THE STUDY: Results suggest that subclinical listerial mastitis should not be neglected as a potential source of milk contamination. The presence of hypervirulent CCs in subclinical mastitis cases calls for the implementation of improved mastitis detection.


Subject(s)
Listeria monocytogenes/isolation & purification , Listeria monocytogenes/pathogenicity , Mastitis, Bovine/epidemiology , Mastitis, Bovine/microbiology , Meningitis, Listeria/veterinary , Animals , Cattle , Farms , Feces/microbiology , Female , Genotype , Listeria monocytogenes/classification , Listeria monocytogenes/genetics , Meningitis, Listeria/epidemiology , Meningitis, Listeria/microbiology , Silage/microbiology , Virulence/genetics
2.
J Fish Dis ; 40(6): 773-784, 2017 Jun.
Article in English | MEDLINE | ID: mdl-27747884

ABSTRACT

Fish are commonly infected with non-tuberculous mycobacteria (NTM), which should be regarded as potential pathogens when handling aquarium fish and equipment. This study examined 107 aquarium fish from pet shops. Cultivation of the fish samples using different selective media was conducted for identification of NTM. Isolates were identified using the GenoType Mycobacterium common mycobacteria and additional species assays, sequencing of the 16S rRNA and rpoB genes, and real-time PCR assay for identification of Mycobacterium (M.) marinum. Among the investigated fish, 79.4% (85/107) were positive for mycobacteria, with 8.2% (7 of 85) having two mycobacterial species present. Among the positive fish, the common pathogens M. marinum, Mycobacterium fortuitum (M. fortuitum group) and Mycobacterium chelonae were identified in approx. 90% of fish and other NTM species in 10%, including Mycobacterium peregrinum/septicum, Mycobacterium gordonae, Mycobacterium arupense, Mycobacterium kansasii, Mycobacterium ulcerans and Mycobacterium setense. The well-known human pathogen M. marinum was present in 10.6% of the positive fish (9 of 85). The species of mycobacteria identified in the study are not only recognized as aquarium fish pathogens, but can also cause pathology in humans. Microbiological and clinical communities should therefore be sensitized to the role of NTM in infections associated with exposure to aquarium fish.


Subject(s)
Fish Diseases/microbiology , Fishes , Mycobacterium Infections, Nontuberculous/veterinary , Nontuberculous Mycobacteria/isolation & purification , Animals , Fish Diseases/epidemiology , Mycobacterium Infections, Nontuberculous/epidemiology , Nontuberculous Mycobacteria/classification , Nontuberculous Mycobacteria/genetics , RNA, Ribosomal, 16S/genetics , Real-Time Polymerase Chain Reaction , Slovenia/epidemiology
3.
J Fish Dis ; 37(9): 805-14, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24118033

ABSTRACT

Among 1280 cultured and wild adult Mediterranean mussels, Mytilus galloprovincialis, collected over a 1-year surveillance period from the Slovene Adriatic Sea, 0.3% were histologically positive for the presence of Marteilia spp. The infection was concentrated in winter. Employing the molecular methods of PCR, cloning, DNA restriction and sequencing, only Marteilia refringens type M was detected in all the infected mussels. Although all life-cycle stages of M. refringens severely infected digestive glands, only sporadic disruption of epithelial cells of digestive tubules and focal destruction of digestive tubules were observed in the infected mussels. This was the first detection of M. refringens in M. galloprovincialis from the Slovene Adriatic Sea with the lowest prevalence reported to date. In addition, our results highlight the need for sequencing to complement the established PCR-RFLP analysis for correct parasite typing.


Subject(s)
Cercozoa/isolation & purification , Cercozoa/physiology , Mytilus/parasitology , Animals , Cercozoa/growth & development , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Seasons , Sequence Analysis, DNA , Slovenia
4.
J Fish Dis ; 37(8): 711-7, 2014 Aug.
Article in English | MEDLINE | ID: mdl-23941273

ABSTRACT

Slovenia has no history of health problems related to proliferative kidney disease (PKD) either in farmed or in wild fish. However, due to the past molecular evidence for the presence of Tetracapsuloides bryosalmonae DNA in tissues of some fish from open waters, a survey was conducted on wild salmonids that were primarily sampled for other purposes. In winter 2010-2011, specimens from a total of 244 rainbow trout, Oncorhynchus mykiss (Walbaum), and brown trout, Salmo trutta L., from 30 bodies of fresh water were examined for T. bryosalmonae using a PCR method. The sampled fish showed no clinical signs or gross pathological lesions characteristic of PKD. Nineteen (7.8%) fish from seven (23.3%) fresh waters were positive for T. bryosalmonae. The identity of PCR amplicons was confirmed by sequencing. With one exception, all the positive fish were found in waters from the regions where the average yearly temperatures and the environmental pollution are higher. This preliminary countrywide survey provided the first insight into the situation regarding T. bryosalmonae infection of wild salmonids in Slovenia.


Subject(s)
Fish Diseases/parasitology , Kidney Diseases/veterinary , Myxozoa , Parasitic Diseases, Animal/parasitology , Trout , Animals , Fish Diseases/epidemiology , Kidney Diseases/epidemiology , Kidney Diseases/parasitology , Parasitic Diseases, Animal/epidemiology , Slovenia/epidemiology
5.
Res Vet Sci ; 91(3): 376-81, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21047662

ABSTRACT

Epidemiological studies on Mycobacterium avium are requisite for revealing infection sources and disease transmission. They are based upon genotyping methods like RFLP and MIRU-VNTR. In our study, MIRU-VNTR typing was applied to 121 previously RFLP typed M. avium field isolates to compare the discriminatory power of both methods. The applicability of MIRU-VNTR typing was studied for isolates from a limited geographic area, namely 41 M. avium subsp. avium and 80 M. avium subsp. hominissuis isolates. Among the former, exhibiting 12 IS901 RFLP types, five MIRU-VNTR types were found with discriminatory index (DI) of 0.716. Among the latter, exhibiting 56 IS1245 RFLP types, 18 MIRU-VNTR types were found with DI of 0.866. Concomitant use of both methods increased DI to 0.981 and 0.995, respectively. MIRU-VNTR typing employing the selected markers provided discernible discrimination among M. avium subsp. hominissuis isolates, but more discriminative markers are needed for M. avium subsp. avium isolates.


Subject(s)
Genetic Variation , Genotype , Mycobacterium avium/classification , Mycobacterium avium/genetics , Tuberculosis/veterinary , Alleles , Animals , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Gene Expression Regulation, Bacterial/physiology , Humans , Slovenia/epidemiology , Tuberculosis/epidemiology , Tuberculosis/microbiology
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