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1.
Angew Chem Int Ed Engl ; 62(6): e202216972, 2023 Feb 01.
Article in English | MEDLINE | ID: mdl-36524679

ABSTRACT

The simplest polycyclic aromatic hydrocarbon (PAH) carrying a five-membered ring-9H-fluorene (C13 H10 )-is produced isomer-specifically in the gas phase by reacting benzyl (C7 H7 ⋅) with phenyl (C6 H5 ⋅) radicals in a pyrolytic reactor coupled with single photon ionization mass spectrometry. The unconventional mechanism of reaction is supported by theoretical calculations, which first produces diphenylmethane and unexpected 1-(6-methylenecyclohexa-2,4-dienyl)benzene intermediates (C13 H12 ) accessed via addition of the phenyl radical to the ortho position of the benzyl radical. These findings offer convincing evidence for molecular mass growth processes defying conventional wisdom that radical-radical reactions are initiated through recombination at their radical centers. The structure of 9H-fluorene acts as a molecular building block for complex curved nanostructures like fullerenes and nanobowls providing fundamental insights into the hydrocarbon evolution in high temperature settings.

2.
Avicenna J Med Biotechnol ; 13(3): 136-142, 2021.
Article in English | MEDLINE | ID: mdl-34484643

ABSTRACT

BACKGROUND: Mouse neutralization test is widely used to determine the level of anti-rabies antibodies, but it is labor-intensive and time consuming. Alternative methods for determining the neutralizing activity of anti-rabies sera and immunoglobulin in cell cultures are also known. Methods such as FAVN and RFFIT involve the use of fluorescent diagnostics. Determination of Cytopathic Effect (CPE) is often complicated due to features of rabies virus replication in cells. Atomic Force Microscopy (AFM) is able to detect the interaction of the virus with the cell at an early stage. Therefore, in this study, a method has been developed for determining the specific activity of anti-rabies sera and immunoglobulin using AFM of cell cultures. METHODS: The method is based on the preliminary interaction of rabies virus with samples of rabies sera or immunoglobulin drug, adding the specified reaction mixture to cell culture (Vero or BHK-21), and then measuring the surface roughness of the cells using AFM. AFM was carried out in the intermittent contact mode by the mismatch method in the semi-contact mode. The results were compared with the values obtained in the mouse neutralization test. The consistency of the results obtained by both methods was evaluated by Bland-Altman method. RESULTS: The increment in the surface roughness of the cells is a consequence of the damaging effect of the virus, which is weakened as a result of its neutralization by rabies antibodies. A dilution allowing 50% suppression of the increase in the surface roughness of cells was selected as the titer of rabies sera or immunoglobulin. In this case, the recommended range for determining the antibody titer is from 1:100 to 1:3000. CONCLUSION: For the first time, a new methodological approach in virology and pharmaceutical research is presented in this study. The use of the proposed methodological technique will reduce the time from 21 to 2 days to obtain results in comparison with the mouse neutralization test; also, fewer laboratory animals are required in this approach which is in agreement with 3 R Principle.

3.
Biol Cybern ; 114(3): 349-362, 2020 06.
Article in English | MEDLINE | ID: mdl-32170500

ABSTRACT

Simulations of neural activity are commonly based on differential equations. We address the question what can be achieved with a simplified discrete model. The proposed model resembles artificial neural networks enriched with additional biologically inspired features. A neuron has several states, and the state transitions follow endogenous patterns which roughly correspond to firing behavior observed in biological neurons: oscillatory, tonic, plateauing, etc. Neural interactions consist of two components: synaptic connections and extrasynaptic emission of neurotransmitters. The dynamics is asynchronous and event-based; the events correspond to the changes in neurons activity. This model is innovative in introducing discrete framework for modeling neurotransmitter interactions which play the important role in neuromodulation. We simulate rhythmic activity of small neural ensembles like central pattern generators (CPG). The modeled examples include: the biphasic rhythm generated by the half-center mechanism with the post-inhibitory rebound (like the leech heartbeat CPG), the triphasic rhythm (like in pond snail feeding CPG) and the pattern switch in the system of several neurons (like the switch between ingestion and egestion in Aplysia feeding CPG). The asynchronous dynamics allows to obtain multi-phasic rhythms with phase durations close to their biological prototypes. The perspectives of discrete modeling in biological research are discussed in the conclusion.


Subject(s)
Models, Neurological , Nerve Net/physiology , Neural Networks, Computer , Neurons/physiology , Animals , Membrane Potentials/physiology
4.
Environ Sci Pollut Res Int ; 27(26): 32318-32340, 2020 Sep.
Article in English | MEDLINE | ID: mdl-31701416

ABSTRACT

Providing access to clean, reliable, and affordable energy by adopting hybrid power systems is important for countries looking to achieve their sustainable development goals. This paper presents an optimization method for sizing a hybrid system including photovoltaic (PV), wind turbines with a hydroelectric pumped storage system. In this paper, the implementation of different optimization techniques has been investigated to achieve optimal sizing of grid-connected hybrid renewable energy systems. A comprehensive study has been carried out between Whale Optimization Algorithm (WOA), Water Cycle Algorithm (WCA), Salp Swarm Algorithm (SSA), and Grey Wolf optimizer (GWO) to validate each one. Moreover, the optimal sizing of the system's components has been studied using real-time information and meteorological data of Ataka region located in Egypt. The purpose of the optimization process is to minimize the cost of energy from this hybrid system while satisfying the operation constraints including high reliability of the hybrid power supply, small fluctuation in the energy injected to the grid, and high utilization of the photovoltaic and wind complementary properties. MATLAB software package has been used to evaluate each optimization algorithm for solving the considered optimization problem. Simulation results proved that WOA has the most promising performance over other techniques.


Subject(s)
Heuristics , Solar Energy , Egypt , Models, Theoretical , Reproducibility of Results
5.
Pediatr Transplant ; 18(2): E44-7, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24330127

ABSTRACT

Half an hour after reperfusion, the kidney, transplanted to the infant from an adult brain dead standard criteria donor, became flabby and acquired blue color. Hyperacute rejection was suspected as a consequence of false negative cross match, and eculizumab was administered with the purpose to treat antibody-mediated injury, with fast and clear effect. The patient's blood was tested for donor-specific antibodies on the next day, and results were negative. We attribute graft damage to reperfusion injury and explain eculizumab's effectiveness to its ability to prevent progression of reperfusion injury.


Subject(s)
Antibodies, Monoclonal, Humanized/therapeutic use , Kidney Transplantation/adverse effects , Reperfusion Injury/therapy , Adult , Antibodies/chemistry , Graft Rejection , Humans , Infant , Kidney/pathology , Male , Reperfusion Injury/etiology , Spleen/pathology , Tissue Donors
6.
Science ; 326(5949): 116-20, 2009 Oct 02.
Article in English | MEDLINE | ID: mdl-19797656

ABSTRACT

Single-walled carbon nanotubes can be classified as either metallic or semiconducting, depending on their conductivity, which is determined by their chirality. Existing synthesis methods cannot controllably grow nanotubes with a specific type of conductivity. By varying the noble gas ambient during thermal annealing of the catalyst, and in combination with oxidative and reductive species, we altered the fraction of tubes with metallic conductivity from one-third of the population to a maximum of 91%. In situ transmission electron microscopy studies reveal that this variation leads to differences in both morphology and coarsening behavior of the nanoparticles that we used to nucleate nanotubes. These catalyst rearrangements demonstrate that there are correlations between catalyst morphology and resulting nanotube electronic structure and indicate that chiral-selective growth may be possible.

7.
Nano Lett ; 9(9): 3203-8, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19640001

ABSTRACT

A new method was used to measure the fraction of semiconducting nanotubes in various as-grown or processed single-walled carbon nanotube (SWCNT) samples. SWCNT number densities were compared in images from near-IR photoluminescence (semiconducting species) and AFM (all species) to compute the semiconducting fraction. The results show large variations among growth methods and effective sorting by density gradient ultracentrifugation. This counting-based method provides important information about SWCNT sample compositions that can guide controlled growth methods and help calibrate bulk characterization techniques.


Subject(s)
Luminescent Measurements/methods , Microscopy, Atomic Force/methods , Nanotechnology/methods , Nanotubes, Carbon/chemistry , Materials Testing , Particle Size , Semiconductors , Surface Properties
8.
ACS Nano ; 3(2): 379-85, 2009 Feb 24.
Article in English | MEDLINE | ID: mdl-19236075

ABSTRACT

Carbon filaments can be grown using hydrocarbons with either exothermic or endothermic catalytic decomposition enthalpies. By in situ monitoring the evolution of the reaction enthalpy during nanotube synthesis via methane gas, we found that although the decomposition reaction of methane is endothermic an exothermic process is superimposed which accompanies the nanotube growth. Analysis shows that the main contributor in this liberated heat is the radiative heat transfer from the surroundings, along with dehydrogenation reaction of in situ formed secondary hydrocarbons on the catalyst surface and the carbon hydrogenation/oxidation processes. This finding implies that nanotube growth process enthalpy is exothermic, and particularly, it extends the commonly accepted temperature gradient driven growth mechanism to the growth via hydrocarbons with endothermic decomposition enthalpy.

9.
Int J Radiat Oncol Biol Phys ; 63(3): 930-3, 2005 Nov 01.
Article in English | MEDLINE | ID: mdl-16199321

ABSTRACT

PURPOSE: The method of magnetic neutron capture therapy can be described as a combination of two methods: magnetic localization of drugs using magnetically targeted carriers and neutron capture therapy itself. METHODS AND MATERIALS: In this work, we produced and tested two types of particles for such therapy. Composite ultradispersed ferro-carbon (Fe-C) and iron-boron (Fe-B) particles were formed from vapors of respective materials. RESULTS: Two-component ultradispersed particles, containing Fe and C, were tested as magnetic adsorbent of L-boronophenylalanine and borax and were shown that borax sorption could be effective for creation of high concentration of boron atoms in the area of tumor. Kinetics of boron release into the physiologic solution demonstrate that ultradispersed Fe-B (10%) could be applied for an effective magnetic neutron capture therapy. CONCLUSION: Both types of the particles have high magnetization and magnetic homogeneity, allow to form stable magnetic suspensions, and have low toxicity.


Subject(s)
Drug Carriers/therapeutic use , Magnetics/therapeutic use , Neutron Capture Therapy/methods , Boron/chemistry , Boron/therapeutic use , Boron Compounds/chemistry , Boron Compounds/therapeutic use , Carbon/chemistry , Drug Carriers/chemical synthesis , Iron/chemistry , Nanotechnology , Phenylalanine/analogs & derivatives , Phenylalanine/chemistry , Phenylalanine/therapeutic use
10.
Virus Res ; 103(1-2): 187-93, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15163508

ABSTRACT

The African green monkey kidney (Vero) cell line was used as a substrate for the development of a live cold-adapted (ca) reassortant influenza vaccine. For that purpose, a new master strain was generated by an adaptation of the wild type (wt) A/Singapore/1/57 virus to growth at 25 degrees C in a Vero cell line. The resulting cold-adapted (ca) muster strain A/Singapore/1/57ca showed temperature sensitive (ts) phenotype and was attenuated in animal models and protective in the challenge experiments in ferrets. Two vaccine candidates of influenza A(H1N1) and A(H3N2) subtypes (6/2 reassortants) inheriting six genes coding internal proteins from the new master strain and the surface antigens hemagglutinin (HA) and neuraminidase (NA) from the epidemic viruses were obtained by a standard method of genetic reassortment. All steps of the vaccine preparation were done exclusively in Vero cells, including the isolation of the epidemic viruses. Both vaccine strains were used for immunization of young adult volunteers in a limited clinical trial and appeared to be safe, well tolerated and immunogenic after intranasal administration.


Subject(s)
Adaptation, Physiological , Cold Temperature , Influenza A virus/physiology , Influenza Vaccines , Adult , Animals , Chlorocebus aethiops , Ferrets , Humans , Influenza A virus/genetics , Influenza A virus/pathogenicity , Influenza Vaccines/administration & dosage , Influenza Vaccines/adverse effects , Influenza Vaccines/immunology , Influenza, Human/prevention & control , Mice , Mice, Inbred BALB C , Vaccination , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/adverse effects , Vaccines, Attenuated/immunology , Vero Cells/virology , Virus Replication
11.
Adv Space Res ; 31(10): 2211-4, 2003.
Article in English | MEDLINE | ID: mdl-14686434

ABSTRACT

Plant experiments in earth orbit are typically prepared on the ground and germinated in orbit to study gravity effects on the developing seedlings. Germination requires the breakdown of storage compounds, and this metabolism depends upon respiration, making oxygen one of the limiting factors in seed germination. In microgravity lack of run-off of excess water requires careful testing of water dispensation and oxygen availability. In preparation for a shuttle experiment (MICRO on STS-107) we studied germination and growth of flax (Linum usitatissimum L.) seedlings in the developed hardware (Magnetic Field Chamber, MFC). We tested between four to 32 seeds per chamber (air volume=14 mL) and after 36 h measured the root length. At 90 microliters O2 per seed (32 seeds/chamber), the germination decreased from 94 to 69%, and the root length was reduced by 20%, compared to 8 seeds per chamber. Based on the percent germination and root length obtained in controlled gas mixtures between 3.6 and 21.6% O2 we determined the lower limit of reliable germination to be 10 vol. % O2 at atmospheric pressure. Although the oxygen available in the MFC's can support the intended number of seeds, the data show that seed storage and microgravity-related limitations may reduce germination.


Subject(s)
Flax/growth & development , Flax/metabolism , Germination/physiology , Oxygen/pharmacokinetics , Seeds/metabolism , Dose-Response Relationship, Drug , Environment, Controlled , Evaluation Studies as Topic , Flax/physiology , Plant Roots/growth & development , Plant Roots/metabolism , Plant Roots/physiology , Seeds/growth & development , Seeds/physiology , Space Flight , Weightlessness
12.
Adv Space Res ; 31(10): 2261-8, 2003.
Article in English | MEDLINE | ID: mdl-14686441

ABSTRACT

This experiment was conducted as part of a risk mitigation payload aboard the Space Shuttle Atlantis on STS-101. The objectives were to test a newly developed water delivery system, and to determine the optimal combination of water volume and substrate for the imbibition and germination of flax (Linum usitatissimum) seeds in space. Two different combinations of germination paper were tested for their ability to absorb, distribute, and retain water in microgravity. A single layer of thick germination paper was compared with one layer of thin germination paper under a layer of thick paper. Paper strips were cut to fit snugly into seed cassettes, and seeds were glued to them with the micropyle ends pointing outward. Water was delivered in small increments that traveled through the paper via capillary action. Three water delivery volumes were tested, with the largest (480 microliters) outperforming the 400 microliters and 320 microliters volumes for percent germination (90.6%) and root growth (mean=4.1 mm) during the 34-hour spaceflight experiment. The ground control experiment yielded similar results, but with lower rates of germination (84.4%) and shorter root lengths (mean=2.8 mm). It is not clear if the roots emerged more quickly in microgravity and/or grew faster than the ground controls. The single layer of thick germination paper generally exhibited better overall growth than the two layered option. Significant seed position effects were observed in both the flight and ground control experiments. Overall, the design of the water delivery system, seed cassettes and the germination paper strip concept was validated as an effective method for promoting seed germination and root growth under microgravity conditions.


Subject(s)
Flax/growth & development , Germination/physiology , Hydroponics/instrumentation , Space Flight/instrumentation , Water Supply , Weightlessness , Equipment Design , Evaluation Studies as Topic , Hydroponics/methods , Plant Roots/growth & development , Seeds/growth & development , Temperature
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