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1.
Plants (Basel) ; 12(24)2023 Dec 15.
Article in English | MEDLINE | ID: mdl-38140505

ABSTRACT

The possibility of pigment detection and recognition in different environments such as solvents or proteins is a challenging, and at the same time demanding, task. It may be needed in very different situations: from the nondestructive in situ identification of pigments in paintings to the early detection of fungal infection in major agro-industrial crops and products. So, we propose a prototype method, the key feature of which is a procedure analyzing the lineshape of a spectrum. The shape of the absorption spectrum corresponding to this transition strongly depends on the immediate environment of a pigment and can serve as a marker to detect the presence of a particular pigment molecule in a sample. Considering carotenoids as an object of study, we demonstrate that the combined operation of the differential evolution algorithm and semiclassical quantum modeling of the optical response based on a generalized spectral density (the number of vibronic modes is arbitrary) allows us to distinguish quantum models of the pigment for different solvents. Moreover, it is determined that to predict the optical properties of monomeric pigments in protein, it is necessary to create a database containing, for each pigment, in addition to the absorption spectra measured in a predefined set of solvents, the parameters of the quantum model found using differential evolution.

2.
Spectrochim Acta A Mol Biomol Spectrosc ; 282: 121653, 2022 Dec 05.
Article in English | MEDLINE | ID: mdl-35926286

ABSTRACT

Mathematically describing the length-dependence of vibrational fingerprints of polyenes is challenging, yet crucial in understanding and predicting polyene-associated molecular properties of industrially-important and vital substances. To this end, we develop an analytical relationship between the wavenumbers ν∼C=C of the Raman-active CC stretching mode in polyene sequences (CHCH)n and the polyene length (n) using classical mechanics laws. Noteworthy, this relationship is derived from Newton's equations instead of regression approximations and validated against experimental data for degraded polyvinyl chloride (PVC), t-butyl end-capped all-trans polyenes, ß-carotenes, and carotenoids. Furthermore, given this fundamental tool, we carefully re-examined or validated the up-to-now applied empirical tools; we find that: (i) A phenomenological exponential regression function ν~C=C=1461+151.2×exp-0.07808n proves fairly suitable for describing polyenes with lengths below 24 in degraded PVC. (ii) The derived analytical relationship agrees more closely with a long-established reciprocal-length regression function ν~C=C=1459+720/n+1 for describing carotenoids. Moreover, extensive DFT calculation results on all-trans polyenes H(CHCH)nH (n = 3-30) and polyenes end-capped with terminal vinyl chloride oligomers agree with experiment for shorter polyenes and are similar, showing that complicated calculations of ν∼C=C for infinite degraded PVC chains reduce to the calculations on finite polyene sequences. Noteworthy, unlike other polyene length-determination tools, the proposed analytical polyene length-determination based on intrinsic physical properties could well prove to be an even more versatile tool, as it comes with the added potential for determining or correcting the elasticity constants of carbon bonds in polyene chains.


Subject(s)
Polyenes , Polyvinyl Chloride , Carotenoids/chemistry , Polyenes/chemistry , Vibration
3.
Spectrochim Acta A Mol Biomol Spectrosc ; 252: 119494, 2021 May 05.
Article in English | MEDLINE | ID: mdl-33540377

ABSTRACT

The degradation of the ubiquitous polyvinylchloride (PVC) material under the influence of various factors is known to result commonly in polyene formation. Such polyene defects occur in the form of conjugated aliphatic chains with different lengths and contents, and their sensitive and length-specific monitoring is important for the assessment of PVC degradation. Here, we report on the resonance-enhanced Raman signatures of polyene sequences of varying lengths in photo- and thermally degraded PVC films. The lengths of polyene segments have been estimated based on their selectively enhanced and spectrally resolved contributions to the Raman bands assigned to the stretching vibrations of conjugated double carbon bonds. Using deconvolution analysis of a characteristic Raman band of polyenes, we especially demonstrate that the spectral signatures of polyene segments corresponding to other various electronic resonances contribute to the Raman spectral envelope observed at a given resonant excitation. In most cases, we observe an asymmetric band profile, indicating an asymmetric length distribution of polyene defects formed in PVC films upon a mild degradation extent less than 1% mass loss. We also demonstrate that the wavenumber (ν1) of the stretching vibrations of single carbon bonds in the polyene sequences of degraded PVC is inversely related to the number (n) of double carbon bonds by an empirical equation n=476·cm-1/ν1-1082·cm-1. To the best of our knowledge, while considering different laser excitations spanning the range of possible electronic resonances from blue to near-infrared for Raman investigations, the present work includes (i) the first Raman spectral deconvolution study for the 532.0 nm excitation wavelength used in most portable Raman probes nowadays and (ii) the screening of polyene defects also beyond the red edge of the visible spectrum and the evidence of a resonance-enhanced polyene signal at 647.1 nm. Important new information has been obtained about polyene lengths and spectral distribution for PVC, whose critical physical properties ranging from flexibility to electrical resistance are severely affected by polyene formation.

4.
Polymers (Basel) ; 12(9)2020 Sep 21.
Article in English | MEDLINE | ID: mdl-32967332

ABSTRACT

The expansion of the range of physico-chemical methods in the study of industrially significant α-olefin oligomers and polymers is of particular interest. In our article, we present a comparative Raman study of structurally uniform hydrogenated dimers, trimers, tetramers, and pentamers of 1-hexene and 1-octene, that are attractive as bases for freeze-resistant engine oils and lubricants. We found out that the joint monitoring of the disorder longitudinal acoustic mode (D-LAM) and symmetric C-C stretching modes allows the quantitative characterization of the number and length of alkyl chains (i.e., two structural characteristics), upon which the pour point and viscosity of the hydrocarbons depend, and to distinguish these compounds from both each other and linear alkanes. We demonstrated that the ratio of the contents of CH2 and CH3 groups in these hydrocarbons can be determined by using the intensities of the bands in the spectra, related to the asymmetric stretching vibrations of these groups. The density functional theory (DFT) calculations were applied to reveal the relations between the wavenumber and bandshape of the symmetric C-C stretching mode and a conformation arrangement of the 1-hexene and 1-octene dimers. We found that the branched double-chain conformation results in the splitting of the C-C mode into two components with the wavenumbers, which can be used as a measure of the length of branches. This conformation is preferable to the extended-chain conformation for hydrogenated 1-hexene and 1-octene dimers.

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