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1.
Chem Biodivers ; 20(11): e202300797, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37751377

ABSTRACT

Vigna unguiculata L. Walp. is an African crop spread worldwide mainly for pulses production. Despite being a neglected and under-utilized food, cowpea leaves are a rich source of phytochemicals and micronutrients. The aim of the work is to characterize the phytochemical composition of cowpea leaves by an optimized ultrasound-assisted extraction (USAE) and to compare raw and boiled leaves. A three-level factorial design (Box-Behnken) was employed for the optimization of the USAE considering three different parameters (% ethanol, drug-to-solvent ratio, and number of cycles). The optimized extracts were characterized by LC/MS/MS. Finally, leaves were boiled at 100 °C for 30 min to simulate traditional cooking procedures and compared to raw leaves. The best extraction condition was EtOH/H2 O 1 : 2 v/v, drug to solvent ratio 1 : 47 w/v, and 3 extraction cycles. The phytochemicals identified mainly belong to the family of phenolic acids, flavonoids, terpenoids, and alkaloids. Boiled leaves revealed a significant loss of most phytochemicals and a net decrease of their antioxidant activity compared to the raw ones. The results highlight the potential nutraceutical value of cowpea leaves whilst the impoverishment triggered by traditional consumer habits pushes the need to evaluate alternative cooking procedures helpful in the maintenance of their phytochemical properties.


Subject(s)
Vigna , Vigna/chemistry , Tandem Mass Spectrometry , Phytochemicals , Ethanol/chemistry , Solvents , Habits
2.
RSC Adv ; 12(28): 17661-17674, 2022 Jun 14.
Article in English | MEDLINE | ID: mdl-35765323

ABSTRACT

The effect of two different anionic membranes on manganese deposition was studied in a two-compartment electrochemical reactor with a titanium cathode and a dimensionally stable RuO2|Ti anode. Chronopotentiometry, ICP-OES, SEM, XRD and elemental mapping were used to understand the changes in concentration and characteristics of the metallic deposition at different current densities with the anionic membranes AMI 7001s and Neosepta AMX. The results demonstrate that AMI reduces more manganese than AMX below -100 A m-2, generating more metallic deposition but also more low-solubility manganous by-products, whereas both membranes exhibited similar behaviours above -100 A m-2 reaching the maximum current efficiency (63%) at -200 A m-2. It was also observed that the membranes have a significant effect on sulphate consumption since they are anions.

3.
RSC Adv ; 11(41): 25542-25550, 2021 Jul 19.
Article in English | MEDLINE | ID: mdl-35478895

ABSTRACT

Electrochemical reduction of ionic species during manganese deposition from sulphated aqueous solutions has been studied in an electrochemical reactor with two anionic exchange membranes. Thermodynamic analysis, voltammetries, and chronopotentiometries were used to determine the reaction mechanism of the reductions developed, with the results demonstrating that the effect of the elemental selenium on the hydrogen evolution leads to the formation of elemental sulphur by reducing the sulphate ions with both membranes. It was also evident that in the range of -25 to -50 A m-2 the electrodeposition of metallic manganese begins, with minimal interference from parasitic reactions.

4.
Food Chem Toxicol ; 119: 112-121, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29753868

ABSTRACT

Today, in many European countries, people are looking for wild edible plants to experience new tastes and flavors, by following the new trend of being green and environmentally friendly. Young borage and spinach leaves can be easily confused by inexpert pickers with those of other plants, including poisonous ones, such as Mandragora autumnalis Bertol. (mandrake) or Digitalis purpurea L. (foxglove), common in southern and northern Italy respectively. In the last twenty years, several cases of intoxication by accidental ingestion of mandrake and foxglove have been reported. The purpose of this work was to perform a pharmacognostic characterization of young leaves from borage, mandrake, foxglove and spinach, by micro-morphological, molecular and phytochemical techniques. The results showed that each of the three techniques investigated could be sufficient alone to provide useful information for the identification of poisonous species helping the medical staff to manage quickly the poisoned patients. However, the multi-disciplinary approach proposed could be very useful to asses the presence of poisonous plants in complex matrices, to build a database containing morphological, molecular and phytochemical data for the identification of poisonous species or in forensic toxicology, given their increasingly frequent use due to their low cost and relatively common availability.


Subject(s)
Plant Leaves/chemistry , Plants, Edible/chemistry , Plants, Toxic/chemistry , Alkaloids/chemistry , Chromatography, Gas , Digitalis Glycosides/chemistry , Gas Chromatography-Mass Spectrometry , Humans , Italy , Mediterranean Region , Phytochemicals , Plant Leaves/ultrastructure
5.
Environ Monit Assess ; 189(4): 179, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28342047

ABSTRACT

Metal toxicity can cause hematologic abnormalities and hemolysis. To evaluate the relationship of anemia with metal contamination in children, the following elements were quantified in dry blood: silicon, chromium, lead, titanium, vanadium, nickel, arsenic, manganese, and cadmium. A total of 88 samples of anemic children and 208 of non-anemic children aged 6-12 years were analyzed. Lead (35.1%), chromium (24.3%), vanadium (24.3%), nickel (45.6%), and silicon (48.6%) were identified in the samples, with titanium only detected in anemic children. The average level of arsenic was higher in anemic than non-anemic children (0.041 ± 0.11 wt% vs 0.014 ± 0.05 wt%, p < 0.05) and correlated with the concentration of hemoglobin (r = -0.441, p < 0.01). In conclusion, heavy metals, which confer a health risk, were detected in the dry blood of the children evaluated, and the levels of arsenic and titanium were found to be related to anemia.


Subject(s)
Environmental Exposure/statistics & numerical data , Hemoglobins/metabolism , Metals, Heavy/blood , Arsenic/analysis , Arsenic/blood , Cadmium/analysis , Cadmium/blood , Child , Chromium/analysis , Chromium/blood , Environmental Monitoring , Female , Heavy Metal Poisoning , Humans , Lead/analysis , Lead/blood , Male , Manganese/analysis , Manganese/blood , Metals/blood , Metals, Heavy/analysis , Mexico/epidemiology , Nickel , Poisoning/epidemiology , Titanium , Vanadium
6.
Conserv Biol ; 30(4): 763-73, 2016 08.
Article in English | MEDLINE | ID: mdl-26864475

ABSTRACT

Frugivores are critical components of restoration programs because they are seed dispersers. Thus, knowledge about bird-plant trophic relationships is essential in the evaluation of the efficacy of restoration processes. Traditionally, the diet of frugivores is characterized by microscopically identifying plant residues in droppings, which is time-consuming, requires botanical knowledge, and cannot be used for fragments lacking detectable morphological characteristics (e.g., fragmented seeds and skins). We examined whether DNA barcoding can be used as a universal tool to rapidly characterize the diet of a frugivorous bird, Eurasian blackcap (Sylvia atricapilla). We used the DNA barcoding results to assess restoration efforts and monitor the diversity of potentially dispersed plants in a protected area in northern Italy. We collected 642 Eurasian Blackcap droppings at the restored site during the autumn migration over 3 years. Intact seeds and fragmented plant material were analyzed at 2 plastidial barcode loci (rbcL and trnH-psbA), and the resulting plant identifications were validated by comparison with a reference molecular data set of local flora. At least 17 plant species, including 7 of the 11 newly transplanted taxa, were found. Our results demonstrate the potential for DNA barcoding to be used to monitor the effectiveness of restoration plantings and to obtain information about fruit consumption and dispersal of invasive or unexpected plant species. Such an approach provides valuable information that could be used to study local plant biodiversity and to survey its evolution over time.


Subject(s)
Birds , Conservation of Natural Resources , DNA Barcoding, Taxonomic , Diet , Animals , Biodiversity , DNA, Plant , Italy , Plants
7.
Appl Microbiol Biotechnol ; 99(22): 9779-89, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26239070

ABSTRACT

The paper describes the preparation of new probiotic formulations based on chitosan-coated alginate microcapsules containing three different probiotic strains, Lactobacillus plantarum PBS067, Lactobacillus rhamnosus PBS070, and Bifidobacterium animalis subsp. lactis PBS075 taken individually and as a mixture of them. The effects of microencapsulation on the viability of the strains in conditions simulating the gastrointestinal tract and under industrial processes conditions were studied. In addition, an evaluation of their probiotic properties was also investigated by in vitro tests on the human intestinal cell line HT-29 to explore the effect of microencapsulation on health beneficial effect of the considered strains. Non-encapsulated cells were completely destroyed when exposed to simulated gastric juice and other stress conditions, while encapsulated cells exhibited a significantly higher resistance to artificial intestinal juice and heat and osmotic treatment. Moreover, in this study, the effect of the various microencapsulated probiotic strain formulations was compared with analogous formulations also containing the ß-glucan Pleuran. The microencapsulation effectively protected the selected bacteria, as single strain and as a mixture of the three strains in both the formulations with and without Pleuran, from simulating gastrointestinal tract and industrial process conditions in delivering the viable cells without any significant adverse effect on their functionalities. The comparative study of the immunomodulatory properties of each single strain and the mixture of the three strains revealed a synergistic effect of the probiotic mixture, but no appreciable difference between the two kinds of formulations could be detected, as the effect of Pleuran is covered by the higher potential of the probiotic strains.


Subject(s)
Bifidobacterium/physiology , Drug Compounding/methods , Lacticaseibacillus rhamnosus/physiology , Lactobacillus plantarum/physiology , Probiotics/administration & dosage , Probiotics/pharmacokinetics , Administration, Oral , Alginates , Capsules/chemistry , Chitosan , Gastrointestinal Tract , Glucuronic Acid , Hexuronic Acids , Humans , Microbial Viability , Models, Biological
8.
Appl Microbiol Biotechnol ; 99(13): 5613-26, 2015 Jul.
Article in English | MEDLINE | ID: mdl-25744647

ABSTRACT

Probiotic ingestion is recommended as a preventive approach to maintain the balance of the intestinal microbiota and to enhance the human well-being. During the whole life of each individual, the gut microbiota composition could be altered by lifestyle, diet, antibiotic therapies and other stress conditions, which may lead to acute and chronic disorders. Hence, probiotics can be administered for the prevention or treatment of some disorders, including lactose malabsorption, acute diarrhoea, irritable bowel syndrome, necrotizing enterocolitis and mild forms of inflammatory bowel disease. The probiotic-mediated effect is an important issue that needs to be addressed in relation to strain-specific probiotic properties. In this work, the probiotic properties of new Lactobacillus and Bifidobacterium strains were screened, and their effects in vitro were evaluated. They were screened for probiotic properties by determining their tolerance to low pH and to bile salts, antibiotic sensitivity, antimicrobial activity and vitamin B8, B9 and B12 production, and by considering their ability to increase the antioxidant potential and to modulate the inflammatory status of systemic-miming cell lines in vitro. Three out of the examined strains presenting the most performant probiotic properties, as Lactobacillus plantarum PBS067, Lactobacillus rhamnosus PBS070 and Bifidobacterium animalis subsp. lactis PBSO75, were evaluated for their effects also on human intestinal HT-29 cell line. The obtained results support the possibility to move to another level of study, that is, the oral administration of these probiotical strains to patients with acute and chronic gut disorders, by in vivo experiments.


Subject(s)
Bifidobacterium/physiology , Lactobacillus/physiology , Probiotics , Animals , Anti-Bacterial Agents/pharmacology , Antibiosis , Antioxidants/metabolism , Bifidobacterium/drug effects , Bifidobacterium/immunology , Bifidobacterium/isolation & purification , Bile Acids and Salts/metabolism , Cell Line , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Epithelial Cells/microbiology , Epithelial Cells/physiology , Fibroblasts/microbiology , Fibroblasts/physiology , Humans , Hydrogen-Ion Concentration , Lactobacillus/drug effects , Lactobacillus/immunology , Lactobacillus/isolation & purification , Mice, Inbred BALB C , Molecular Sequence Data , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Vitamin B Complex/metabolism
9.
Food Chem ; 170: 308-15, 2015 Mar 01.
Article in English | MEDLINE | ID: mdl-25306350

ABSTRACT

The purpose of this study was to test the ability of DNA barcoding to identify the plant origins of processed honey. Four multifloral honeys produced at different sites in a floristically rich area in the northern Italian Alps were examined by using the rbcL and trnH-psbA plastid regions as barcode markers. An extensive reference database of barcode sequences was generated for the local flora to determine the taxonomic composition of honey. Thirty-nine plant species were identified in the four honey samples, each of which originated from a mix of common plants belonging to Castanea, Quercus, Fagus and several herbaceous taxa. Interestingly, at least one endemic plant was found in all four honey samples, providing a clear signature for the geographic identity of these products. DNA of the toxic plant Atropa belladonna was detected in one sample, illustrating the usefulness of DNA barcoding for evaluating the safety of honey.


Subject(s)
DNA Barcoding, Taxonomic/methods , Honey/analysis , Plants/genetics , Genes, Plant
10.
Int J Legal Med ; 127(6): 1109-23, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23842669

ABSTRACT

We have combined morphological, molecular, and chemical techniques in order to identify the plant and chemical composition of some last-generation smart drugs, present on the market under the following names: Jungle Mistic Incense, B-52, Blendz, and Kratom 10x. Micromorphological analyses of botanical fragments allowed identification of epidermal cells, stomata, trichomes, starch, crystals, and pollen. DNA barcoding was carried out by the plastidial gene rbcL and the spacer trnH-psbA as universal markers. The combination of morphological and molecular data revealed a mixture of plants from different families, including aromatic species, viz., Lamiaceae and Turneraceae. GC-MS and LC-MS analyses on ethanol or methanol extracts showed the presence of synthetic cannabinoids, including JWH-250 in Jungle, JWH-122 in B-52, and JWH-073 and JWH-018 in Blendz. In Kratom 10x, only the indole alkaloid mitragynine was detected. All the identified synthetic cannabinoids, apart from mitragynine, are under the restriction of law in Italy (TU 309/90). Synthetic cannabinoid crystals were also identified by scanning electron microscopy and energy dispersive X-ray spectroscopy, which also detected other foreign organic chemicals, probably preservatives or antimycotics. In Kratom only leaf fragments from Mitragyna speciosa, containing the alkaloid mitragynine, were found. In the remaining products, aromatic plant species have mainly the role of hiding synthetic cannabinoids, thus acting as a "green shuttle" rather than as real drugs. Such a multidisciplinary approach is proposed as a method for the identification of herbal blends of uncertain composition, which are widely marketed in "headshops" and on the Internet, and represent a serious hazard to public health.


Subject(s)
Cannabinoids/analysis , Designer Drugs/analysis , Illicit Drugs/analysis , Plants/chemistry , Secologanin Tryptamine Alkaloids/analysis , DNA, Intergenic/genetics , DNA, Plant/analysis , DNA, Plant/genetics , Gas Chromatography-Mass Spectrometry , Herbal Medicine , Humans , Italy , Microscopy, Electron, Scanning , Plants/anatomy & histology , Plants/genetics , Ribulose-Bisphosphate Carboxylase/genetics , Spectrometry, X-Ray Emission
11.
Plant Biol (Stuttg) ; 12(3): 558-62, 2010 May 01.
Article in English | MEDLINE | ID: mdl-20522194

ABSTRACT

Vitis vinifera ssp. silvestris, the spontaneous subspecies of V. vinifera L., is believed to be the ancestor of present grapevine cultivars. In this work, polymorphism at 13 SSR loci was investigated to answer the following key question: are wild plants (i) true silvestris, (ii) hybrids between wild and cultivated plants or (iii) or 'escapes' from vineyards? In particular, the objective of the present study was to identify truly wild individuals and to search for possible hybridization events. The study was performed in Sardinia, the second largest island in the Mediterranean Sea, which is characterized by a large and well-described number of both grape cultivars and wild populations. This region was ideal for the study because of its spatial isolation and, consequently, limited contamination from outside material. The results of this study show that domesticated and wild grapevine germplasms are genetically divergent and thus are real silvestris. Pure lineages (both domesticated and wild) show very high average posterior probabilities of assignment to their own clusters, with a low level of introgression.


Subject(s)
Chimera , Genetics, Population , Vitis/genetics , Alleles , Bayes Theorem , Cluster Analysis , DNA, Plant/genetics , Gene Frequency , Geography , Italy , Linkage Disequilibrium , Microsatellite Repeats , Models, Genetic , Polymorphism, Genetic , Sequence Analysis, DNA
12.
J Plant Res ; 122(4): 377-87, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19363647

ABSTRACT

This paper illustrates the phylogeographical structure of Saxifraga callosa in order to describe its genetic richness in refugial areas and to reconstruct its glacial history. S. callosa is a species spread throughout south-east France and Italy with a high distribution in the Maritime Alps. Four chloroplast microsatellite and AFLP markers were analyzed in populations of S. callosa. The size variants of all tested loci amount to 11 different haplotypes. Intrapopulational haplotype variation was found in two of the populations analyzed: on the Mt. Toraggio in the Maritime Alps, and in the Apuan Alps. On the other hand, no intrapopulational variation was found in 25 populations, most of which were sampled from isolated areas. Analysis of the haplotype distribution showed that population subdivision across all populations was high (G (ST) = 0.899). Moreover, its genetic structure was studied using AMOVA and STRUCTURE analysis. The study legitimated inferred conclusions about the phylogeographical structure of the species and identified centers of diversity. Considerations concerning genetic structure and divergence among three major clades (Maritime Alps, Apuan Alps and Apennines), the patchy distribution of haplotypes, and the high number of private haplotypes support the proposal that S. callosa survived in some refugia within the Italian Peninsula refugium, and that mainly northern populations of refugia were involved in postglacial recolonization.


Subject(s)
Geography , Haplotypes/genetics , Ice Cover , Phylogeny , Saxifragaceae/genetics , Cluster Analysis , Microsatellite Repeats/genetics , Polymorphism, Genetic , Population Dynamics
13.
Pak J Biol Sci ; 10(11): 1855-9, 2007 Jun 01.
Article in English | MEDLINE | ID: mdl-19086550

ABSTRACT

To assess the haplotype diversity and genetic relationship between them, A set of 69 Iranian cultivated accessions, six European cultivars and an accession of Vitis labrusca along with 63 wild grapevine individuals were studied using chloroplast microsatellite markers. Results showed that among analyzed cpssr loci only ccmp 3 and ccmp10 were polymorphic within cultivars and only ccmp3 was polymorphic in wild grape individuals. The size variants of both loci combine in a total of 4 different haplotypes. All the 4 haplotype are displayed in the cultivars while only 2 are presented in wild grapes. Sultani or keshmeshi Bidane cultivar has the haplotype III that there is not this haplotype among the wild grapes of studied regions. Concerning to existence of both haplotypes I and II in the number of Iranian cultivated and wild grapes, it is possible to consider that the wild grapes are ancestor of some of our native cultivars.


Subject(s)
Chloroplasts/genetics , Genetic Markers , Genetic Variation , Microsatellite Repeats/genetics , Vitis/genetics , Alleles , Haplotypes , Iran , Species Specificity
14.
Plant Biol (Stuttg) ; 8(2): 243-52, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16547869

ABSTRACT

Saxifraga callosa Sm. is an evergreen perennial species distributed from Eastern Spain, through the Western Alps and the Apennines, to southern Italy. The existence of high morphological variation within different subspecies indicates that phenotypic characters are useful but not sufficient taxonomic tools. Indeed, available morphological data already suggested that S. callosa subentity lantoscana may be an outcross between S. callosa and S. cochlearis. In this work, by analyzing ITS (Internal Transcribed Sequences), AFLP (Amplified Fragment Length Polymorphisms), and cpDNA (chloroplast DNA) markers, a comprehensive study of the genomic relationships among S. callosa and related species has been carried out. The sequence of the ITS region of S. callosa subentity lantoscana gave no conclusive results on the taxonomy status of S. callosa subentity lantoscana. On the other hand, the use of the "NewHybrids" software to analyze an AFLP data-set (208 polymorphic amplified fragments) supported a significant posterior probability that S. callosa subentity lantoscana individuals are natural hybrids between S. callosa and S. cochlearis. The level of introgression of genes from alien genomes was confirmed by a simpler and quick methodology that analyze length variation in cpDNA sequences.


Subject(s)
Hybridization, Genetic , Saxifragaceae/genetics , Crosses, Genetic , DNA, Intergenic , DNA, Plant/genetics , Europe , Nucleic Acid Amplification Techniques , Phenotype , Phylogeny , Plastids/genetics , Saxifragaceae/classification
15.
Chemosphere ; 62(8): 1234-44, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16313944

ABSTRACT

The plant metabolic response to heavy metal stress is largely unknown. The present investigation was undertaken to examine the influence of different concentrations of potassium dichromate on the Zea mays L. plantlets. A clear effect of chromium on maize plantlets growth and seed germination was observed strating from 100-300 ppm up to 1500 ppm. In this concentration range, chromium uptake was dependent on the concentration in the medium. Metallothioneins, involved in heavy metal binding, were measured by capillary electrophoresis (CE), and showed a dose-response induction. Protein profile analyzed by two-dimensional gel electrophoresis showed differential expression of several proteins. Identification of spots of upregulated proteins was performed by MALDI mass spectrometry. Results showed that proteins induced by heavy metal exposure are principally involved in oxidative stress tolerance or in other stress pathways. Induction of proteins implicated in sugar metabolism was also observed. Identification of factors involved in plant response may lead to a better understanding of the mechanisms involved in cell protection and tolerance. This information could be used to improve agricultural production and environmental quality.


Subject(s)
Caustics/toxicity , Germination/drug effects , Plant Proteins/drug effects , Potassium Dichromate/toxicity , Zea mays/drug effects , Metallothionein/biosynthesis , Plant Proteins/metabolism , Zea mays/growth & development , Zea mays/metabolism
16.
Theor Appl Genet ; 109(7): 1512-8, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15300384

ABSTRACT

The occurrence of DNA modification is an undesired phenomenon accompanying plant cell transformation. The event has been correlated with the stress imposed by the presently utilised transformation procedures, all depending on plant differentiation from in vitro cell culture, but other causes have not been excluded. In this work, transgenic Arabidopsis thaliana plants have been produced by an approach that does not require cell dedifferentiation, being based on in planta Agrobacterium-mediated gene transfer by flower infiltration, which is followed by recovery and selection of transgenic progeny. Genomic DNA changes in transgenic and control plants have been investigated by AFLP and RAMP analysis. Results show no statistically relevant genomic modifications in transgenic plants, as compared with control untreated plants. Variations were observed in callus-derived A. thaliana plants, thus supporting the conclusion that somaclonal variation is essentially correlated with the stress imposed by the in vitro cell culture, rather than with the integration of a foreign gene.


Subject(s)
Arabidopsis/genetics , Flowers/genetics , Genome, Plant , Green Fluorescent Proteins/genetics , Plants, Genetically Modified/genetics , Animals , Arabidopsis/classification , Base Sequence , DNA Primers , DNA, Plant/genetics , DNA, Plant/isolation & purification , Gene Transfer Techniques , Genes, Reporter , Phylogeny , Polymorphism, Genetic , Recombinant Proteins/analysis , Rhizobium/genetics
17.
Plant Biol (Stuttg) ; 6(2): 222-30, 2004.
Article in English | MEDLINE | ID: mdl-15045675

ABSTRACT

Puya raimondii Harms is an outstanding giant rosette bromeliad found solely around 4000 m above sea level in the Andes. It flowers at the end of an 80 - 100-year or even longer life cycle and yields an enormous (4 - 6 m tall) spike composed of from 15,000 to 20,000 flowers. It is endemic and currently endangered, with populations distributed from Peru to the north of Bolivia. A genomic DNA marker-based analysis of the genetic structure of eight populations representative of the whole distribution of P. raimondii in Peru is reported in this paper. As few as 14 genotypes out of 160 plants were detected. Only 5 and 18 of the 217 AFLP marker loci screened were polymorphic within and among these populations, respectively. Four populations were completely monomorphic, each of the others displayed only one to three polymorphic loci. Less than 4 % of the total genomic variation was within populations and genetic similarity among populations was as high as 98.3 %. Results for seven cpSSR marker loci were in agreement with the existence of a single progenitor. Flow cytometry of seed nuclear DNA content and RAPD marker segregation analysis of progeny plantlets demonstrated that the extremely uniform genome of P. raimondii populations is not compatible with agamospermy (apomixis), but consistent with an inbreeding reproductive strategy. There is an urgent need for a protection programme to save not only this precious, isolated species, but also the unique ecosystem depending on it.


Subject(s)
Bromeliaceae/physiology , Chromosomes, Plant/genetics , Genetic Variation/physiology , Bromeliaceae/classification , Bromeliaceae/genetics , Chromosome Mapping , Conservation of Natural Resources , DNA, Plant/genetics , DNA, Plant/isolation & purification , Environment , Flow Cytometry , Geography , Inbreeding , Peru , Polymerase Chain Reaction , Polymorphism, Genetic , Reproduction/physiology
18.
Theor Appl Genet ; 107(7): 1315-20, 2003 Nov.
Article in English | MEDLINE | ID: mdl-13679993

ABSTRACT

The origin of the grapevine was investigated with archaeobotanical, cultural and historical data. A primary domestication centre was located in the Near East region but there is no agreement on the existence or role of secondary domestication centres. In this work, PCR-based microsatellite analysis has been applied to study the origin of some Italian cultivated grapevines from in situ direct domestication of the wild autoctonous grapevine. Three different Italian locations in Grosseto, Cosenza and Nuoro were identified for this study, and domesticated grapevine as well as wild local accessions growing in these location, were analysed by SSR markers. Cluster analysis performed on Cosenza and Grosseto samples showed a high value of genetic distance between domesticated and wild accessions. On the contrary two cultivars (Bovale Murru and Bovale Muristellu) recovered in Nuoro (in the Sardinia island) were very close to some wild varieties. This suggests that the latter two cultivars may have originated from wild grapevines and consequently that in this location a secondary grapevine domestication event occurred. Six Lambrusco varieties were also included in this analysis as ancient putative ancestors of the cultivated grapevines. The molecular analysis excluded this hypothesis and suggest Lambrusco as an independent Vitis taxon.


Subject(s)
Genetic Variation , Microsatellite Repeats , Vitis/genetics , DNA, Plant/analysis , Demography , Evolution, Molecular , Genetic Markers , Italy , Phylogeny , Polymerase Chain Reaction , Polymorphism, Genetic
19.
Chemosphere ; 52(7): 1183-8, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12820999

ABSTRACT

In recent years several plant species have been in use as bioindicators and several tests have been developed to evaluate the toxicity of environmental pollutants in vegetal organisms. In the present paper Arabidopsis thaliana (L.) Heynh. (ecotype Wassilewskija) was used as bioindicators of two genotoxic substances: potassium dichromate and dihydrophenanthrene. Inhibition of seed germination was observed with both pollutants. AFLP analysis (i) indicated that both substances are genotoxic, (ii) showed that dihydrophenanthrene induces DNA changes in different target sequences than potassium dichromate, (iii) quantified the genotoxic effect using cluster analysis by comparing DNA from treated plants with that of control plants. On the basis of these considerations we suggest that AFLP method is a powerful tool for measuring qualitative and quantitative genotoxic activity due to environmental pollutants. AFLP method can be applied to a wide range of bioindicator organisms and may become a universal methodology to identify target genes for specific genotoxic agents. This could open up possibilities for designing specifically targeted assays and new approaches to risk assessment.


Subject(s)
Arabidopsis/drug effects , DNA, Plant/genetics , Environmental Pollutants/toxicity , Inorganic Chemicals/toxicity , Organic Chemicals/toxicity , Arabidopsis/genetics , Mutagenicity Tests , Polymorphism, Restriction Fragment Length , Random Amplified Polymorphic DNA Technique , Seeds/drug effects , Seeds/genetics
20.
Appl Environ Microbiol ; 67(10): 4662-70, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11571170

ABSTRACT

The membrane integrity of a cell is a well-accepted criterion for characterizing viable (active or inactive) cells and distinguishing them from damaged and membrane-compromised cells. This information is of major importance in studies of the function of microbial assemblages in natural environments, in order to assign bulk activities measured by various methods to the very active cells that are effectively responsible for the observations. To achieve this task for bacteria in freshwater and marine waters, we propose a nucleic acid double-staining assay based on analytical flow cytometry, which allows us to distinguish viable from damaged and membrane-compromised bacteria and to sort out noise and detritus. This method is derived from the work of S. Barbesti et al. (Cytometry 40:214-218, 2000) which was conducted on cultured bacteria. The principle of this approach is to use simultaneously a permeant (SYBR Green; Molecular Probes) and an impermeant (propidium iodide) probe and to take advantage of the energy transfer which occurs between them when both probes are staining nucleic acids. A full quenching of the permeant probe fluorescence by the impermeant probe will point to cells with a compromised membrane, a partial quenching will indicate cells with a slightly damaged membrane, and a lack of quenching will characterize intact membrane cells identified as viable. In the present study, this approach has been adapted to bacteria in freshwater and marine waters of the Mediterranean region. It is fast and easy to use and shows that a large fraction of bacteria with low DNA content can be composed of viable cells. Admittedly, limitations stem from the unknown behavior of unidentified species present in natural environments which may depart from the established permeability properties with respect to the fluorescing dyes.


Subject(s)
Bacteria/growth & development , DNA, Bacterial/metabolism , Flow Cytometry/methods , Fresh Water/microbiology , Organic Chemicals , Seawater/microbiology , Staining and Labeling/methods , Bacteria/isolation & purification , Benzothiazoles , Cell Membrane Permeability/physiology , Diamines , Flow Cytometry/instrumentation , Fluorescent Dyes , Propidium , Quinolines
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