A nondestructive method for obtaining maternal DNA from avian eggshells and its application to embryonic viability determination in herring gulls (Larus argentatus).

Many avian studies, aimed at collecting samples for genetic analysis, rely upon invasive procedures involving the capture and handling of parents and their offspring. Our goal was to develop a nondestructive method for sampling maternal DNA that would not require blood collection from the mother. Herein, we describe a method for isolating genomic DNA from eggshell powder, obtained by filing the outer shell of an avian egg. Comparison of microsatellite profiles, obtained from genomic DNA found within eggshell matrices and their corresponding parents, verified the presence of maternal DNA in the eggshell matrix in 100% of the herring gull nests assessed (n= 11). In addition, the microsatellite profiles of eggshell DNA were identical among eggs from the same clutch. The ability to rapidly obtain a DNA sample from an avian eggshell in a noninvasive manner could aid in a wide range of genetic sampling studies, and in this study, we provide one potential application of this finding: assessing the fertilization status of nonviable herring gull (Larus argentatus) eggs from the Laurentian Great Lakes. Detection of fertilization was successful as the microsatellite profiles of eggshell powder (maternal only) and the fertilized embryonic contents of those eggs did not match. Ideally, the application of such an approach will help to discriminate unfertilized eggs from embryos aborted early in development and provide insights into avian reproductive health.

An ab initio and DFT study of structure and vibrational spectra of disiloxane H3SiOSiH3 conformers. Comparison to experimental data.

The structural and vibrational properties of siloxane monomers may account in the physical and chemical properties of silicone polymers. Because disiloxane (H(3)SiOSiH(3)) is the smallest molecule in the set which runs through small siloxanes like hexamethyldisiloxane (CH(3))3SiOSi(CH(3))3 to silicone polymers, its energetic, structural and vibrational features have been investigated in detail using density functional theory (B3LYP), post Hartree-Fock methods (MP2 and CCSD(T)) and basis sets up to spdfg quality. Five conformations were considered: three bent structures with C2v (double staggered, SS, and double eclipsed, EE, conformations) and Cs symmetries, and two linear forms with D3d and D3h symmetries. At all levels of theory, the relative stability was C2v(SS) approximately C2v(EE)>Cs>D3h>D3d. The difference of energy between the two C2v conformers is lower than 0.04 kcal/mol. At the highest level of theory (CCSD(T)/cc-pVQZ), the barrier to linearisation from C(2v) to D(3h) conformers was calculated at 0.43 kcal/mol, which is extremely low. Most of the structural and vibrational features of the disiloxane do not depend on the conformation of the molecule but are strongly influenced by the SiOSi angle. Anharmonic calculations allowed, without any scaling factor, an exhaustive reinvestigation of the assignments of observed wavenumbers in the infrared and Raman spectra of gaseous disiloxane. Particularly, in the gas phase spectrum, the SiOSi symmetric and antisymmetric stretches have been assigned at 599 and 1105, 596 and 1060, 527 and 1093 cm(-1) for H(3)SiOSiH(3), H(3)Si(18)OSiH(3) and D(3)SiOSiD(3), respectively. The experimental wavenumber splitting of SiOSi symmetric and antisymmetric stretches of H(3)SiOSiH(3) gave an estimation of the SiOSi angle at around 145 degrees . Ab initio methods were revealed more accurate for structural parameters, when DFT/B3LYP was enough for spectral assignments, even at the harmonic level using a single scaling factor.