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1.
IEEE Trans Biomed Circuits Syst ; 17(4): 808-817, 2023 08.
Article in English | MEDLINE | ID: mdl-37318976

ABSTRACT

Sweat secreted by the human eccrine sweat glands can provide valuable biomarker information during exercise. Real-time non-invasive biomarker recordings are therefore useful for evaluating the physiological conditions of an athlete such as their hydration status during endurance exercise. This work describes a wearable sweat biomonitoring patch incorporating printed electrochemical sensors into a plastic microfluidic sweat collector and data analysis that shows the real-time recorded sweat biomarkers can be used to predict a physiological biomarker. The system was placed on subjects carrying out an hour-long exercise session and results were compared to a wearable system using potentiometric robust silicon-based sensors and to commercially available HORIBA-LAQUAtwin devices. Both prototypes were applied to the real-time monitoring of sweat during cycling sessions and showed stable readings for around an hour. Analysis of the sweat biomarkers collected from the printed patch prototype shows that their real-time measurements correlate well (correlation coefficient ≥ 0.65) with other physiological biomarkers such as heart rate and regional sweat rate collected in the same session. We show for the first time, that the real-time sweat sodium and potassium concentration biomarker measurements from the printed sensors can be used to predict the core body temperature with root mean square error (RMSE) of 0.02 °C which is 71% lower compared to the use of only the physiological biomarkers. These results show that these wearable patch technologies are promising for real-time portable sweat monitoring analytical platforms, especially for athletes performing endurance exercise.


Subject(s)
Biosensing Techniques , Wearable Electronic Devices , Humans , Sweat/chemistry , Body Temperature , Electrolytes , Biomarkers/analysis
3.
ACS Sens ; 7(9): 2721-2731, 2022 09 23.
Article in English | MEDLINE | ID: mdl-36054907

ABSTRACT

The dysregulation of the hormone cortisol is related to several pathological states, and its monitoring could help prevent severe stress, fatigue, and mental diseases. While wearable antibody-based biosensors could allow real-time and simple monitoring of antigens, an accurate and low-cost antibody-based cortisol detection through electrochemical methods is considerably challenging due to its low concentration and the high ionic strength of real biofluids. Here, a label-free and fast sensor for cortisol detection is proposed based on antibody-coated organic electrochemical transistors. The developed devices show unprecedented high sensitivities of 50 µA/dec for cortisol sensing in high-ionic-strength solutions with effective cortisol detection demonstrated with real human sweat. The sensing mechanism is analyzed through impedance spectroscopy and confirmed with electrical models. Compared to existing methods requiring bulky and expensive laboratory equipment, these wearable devices enable point-of-care cortisol detection in 5 min with direct sweat collection for personalized well-being monitoring.


Subject(s)
Biosensing Techniques , Wearable Electronic Devices , Antibodies/analysis , Biosensing Techniques/methods , Electrochemical Techniques/methods , Humans , Hydrocortisone/analysis , Sweat/chemistry
4.
IEEE J Biomed Health Inform ; 26(9): 4725-4732, 2022 09.
Article in English | MEDLINE | ID: mdl-35749337

ABSTRACT

Improper hydration routines can reduce athletic performance. Recent studies show that data from noninvasive biomarker recordings can help to evaluate the hydration status of subjects during endurance exercise. These studies are usually carried out on multiple subjects. In this work, we present the first study on predicting hydration status using machine learning models from single-subject experiments, which involve 32 exercise sessions of constant moderate intensity performed with and without fluid intake. During exercise, we measured four noninvasive physiological and sweat biomarkers including heart rate, core temperature, sweat sodium concentration, and whole-body sweat rate. Sweat sodium concentration was measured from six body regions using absorbent patches. We used three machine learning models to determine the percentage of body weight loss as an indicator of dehydration with these biomarkers and compared the prediction accuracy. The results on this single subject show that these models gave similar mean absolute errors, while in general the nonlinear models slightly outperformed the linear model in most of the experiments. The prediction accuracy of using the whole-body sweat rate or heart rate was higher than using core temperature or sweat sodium concentration. In addition, the model trained on the sweat sodium concentration collected from the arms gave slightly better accuracy than from the other five body regions. This exploratory work paves the way for the use of these machine learning models to develop personalized health monitoring together with emerging, noninvasive wearable sensor devices.


Subject(s)
Sweat , Sweating , Biomarkers , Humans , Machine Learning , Sodium
5.
Photochem Photobiol Sci ; 21(9): 1545-1555, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35041199

ABSTRACT

miniSOG, developed as the first fully genetically encoded singlet oxygen photosensitiser, has found various applications in cell imaging and functional studies. Yet, miniSOG has suboptimal properties, including a low yield of singlet oxygen generation, which can nevertheless be improved tenfold upon blue light irradiation. In a previous study, we showed that this improvement was due to the photolysis of the miniSOG chromophore, flavin mononucleotide (FMN), into lumichrome, with concomitant removal of the phosphoribityl tail, thereby improving oxygen access to the alloxazine ring. We thus reasoned that a chromophore with a shorter tail would readily improve the photosensitizing properties of miniSOG. In this work, we show that the replacement of FMN by riboflavin (RF), which lacks the bulky phosphate group, significantly improves the singlet oxygen quantum yield (ΦΔ). We then proceeded to mutagenize the residues stabilizing the phosphate group of FMN to alter the chromophore specificity. We identified miniSOG-R57Q as a flavoprotein that selectively binds RF in cellulo, with a modestly improved ΦΔ. Our results show that it is possible to modify the flavin specificity of a given flavoprotein, thus providing a new option to tune its photophysical properties, including those leading to photosensitization. We also determined the structure of miniSOG-Q103L, a mutant with a much increased ΦΔ, which allowed us to postulate the existence of another access channel to FMN for molecular oxygen.


Subject(s)
Flavin Mononucleotide , Singlet Oxygen , Flavin Mononucleotide/chemistry , Flavoproteins/chemistry , Oxygen/chemistry , Phosphates , Riboflavin , Singlet Oxygen/chemistry
6.
Rev Med Suisse ; 17(745): 1289-1294, 2021 Jul 14.
Article in French | MEDLINE | ID: mdl-34264030

ABSTRACT

Sweat is a body fluid produced by the sweat glands and is mainly composed of water. Sweat has various functions, the two main ones being the evacuation of heat produced by the body, especially during exercise, and the maintenance of skin homeostasis. Its production is highly variable and depends on many individual and environmental factors. Various diseases or conditions affect its proper functioning. This article presents an overview of the characteristics, the main health issues, and the current and potential applications related to sweat.


La sueur est un fluide corporel produit par les glandes sudoripares et composé principalement d'eau. La transpiration remplit diverses fonctions, dont les principales sont l'évacuation de la chaleur produite par l'organisme, en particulier durant l'effort physique, et le maintien de l'homéostasie de la peau. Sa production est très variable quantitativement et qualitativement et dépend de multiples facteurs individuels et environnementaux. Différentes pathologies ou conditions altèrent son bon fonctionnement. Cet article présente un aperçu des caractéristiques, des principaux problèmes de santé et des applications actuelles et potentielles en lien avec la sueur.


Subject(s)
Sweat , Sweating , Exercise , Hot Temperature , Humans , Skin
7.
J R Soc Interface ; 16(152): 20180848, 2019 03 29.
Article in English | MEDLINE | ID: mdl-30836899

ABSTRACT

Cyan fluorescent proteins (CFPs) are variants of green fluorescent proteins in which the central tyrosine of the chromophore has been replaced by a tryptophan. The increased bulk of the chromophore within a compact protein and the change in the positioning of atoms capable of hydrogen bonding have made it difficult to optimize their fluorescence properties, which took approximately 15 years between the availability of the first useable CFP, enhanced cyan fluorescent protein (ECFP), and that of a variant with almost perfect fluorescence efficiency, mTurquoise2. To understand the molecular bases of the progressive improvement in between these two CFPs, we have studied by incoherent neutron scattering the dynamics of five different variants exhibiting progressively increased fluorescence efficiency along the evolution pathway. Our results correlate well with the analysis of the previously determined X-ray crystallographic structures, which show an increase in flexibility between ECFP and the second variant, Cerulean, which is then hindered in the three later variants, SCFP3A (Super Cyan Fluorescent Protein 3A), mTurquoise and mTurquoise2. This confirms that increasing the rigidity of the direct environment of the fluorescent chromophore is not the sole parameter leading to brighter fluorescent proteins and that increased flexibility in some cases may be helpful.


Subject(s)
Green Fluorescent Proteins/chemistry , Molecular Dynamics Simulation , Neutrons , Scattering, Radiation
8.
Sci Rep ; 9(1): 2428, 2019 02 20.
Article in English | MEDLINE | ID: mdl-30787421

ABSTRACT

miniSOG is the first flavin-binding protein that has been developed with the specific aim of serving as a genetically-encodable light-induced source of singlet oxygen (1O2). We have determined its 1.17 Å resolution structure, which has allowed us to investigate its mechanism of photosensitization using an integrated approach combining spectroscopic and structural methods. Our results provide a structural framework to explain the ability of miniSOG to produce 1O2 as a competition between oxygen- and protein quenching of its triplet state. In addition, a third excited-state decay pathway has been identified that is pivotal for the performance of miniSOG as 1O2 photosensitizer, namely the photo-induced transformation of flavin mononucleotide (FMN) into lumichrome, which increases the accessibility of oxygen to the flavin FMN chromophore and makes protein quenching less favourable. The combination of the two effects explains the increase in the 1O2 quantum yield by one order of magnitude upon exposure to blue light. Besides, we have identified several surface electron-rich residues that are progressively photo-oxidized, further contributing to facilitate the production of 1O2. Our results help reconcile the apparent poor level of 1O2 generation by miniSOG and its excellent performance in correlative light and electron microscopy experiments.


Subject(s)
Arabidopsis Proteins/genetics , Photosensitizing Agents/metabolism , Protein Conformation , Protein Serine-Threonine Kinases/genetics , Singlet Oxygen/metabolism , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/ultrastructure , Biophysical Phenomena , Flavins/chemistry , Flavins/genetics , Light , Microscopy, Electron , Oxidation-Reduction , Oxygen/metabolism , Photosensitivity Disorders , Photosensitizing Agents/chemistry , Protein Binding/genetics , Protein Engineering , Protein Serine-Threonine Kinases/chemistry , Protein Serine-Threonine Kinases/ultrastructure , Singlet Oxygen/chemistry
9.
Cell Chem Biol ; 24(1): 110-119, 2017 Jan 19.
Article in English | MEDLINE | ID: mdl-28065655

ABSTRACT

Cell ablation is a strategy to study cell lineage and function during development. Optogenetic methods are an important cell-ablation approach, and we have previously developed a mini singlet oxygen generator (miniSOG) tool that works in the living Caenorhabditis elegans. Here, we use directed evolution to generate miniSOG2, an improved tool for cell ablation via photogenerated reactive oxygen species. We apply miniSOG2 to a far more complex model animal system, Drosophila melanogaster, and demonstrate that it can be used to kill a single neuron in a Drosophila larva. In addition, miniSOG2 is able to photoablate a small group of cells in one of the larval wing imaginal discs, resulting in an adult with one incomplete and one normal wing. We expect miniSOG2 to be a useful optogenetic tool for precision cell ablation at a desired developmental time point in live animals, thus opening a new window into cell origin, fate and function, tissue regeneration, and developmental biology.


Subject(s)
Drosophila melanogaster/cytology , Models, Animal , Neurons/drug effects , Optogenetics , Photosensitizing Agents/pharmacology , Singlet Oxygen/metabolism , Animals , Cell Engineering , HEK293 Cells , Humans , Larva/cytology , Larva/drug effects , Neurons/metabolism , Photosensitizing Agents/chemistry
11.
Biochemistry ; 55(31): 4263-74, 2016 08 09.
Article in English | MEDLINE | ID: mdl-27471775

ABSTRACT

Using X-ray crystallography, continuum electrostatic calculations, and molecular dynamics simulations, we have studied the structure, protonation behavior, and dynamics of the biliverdin chromophore and its molecular environment in a series of genetically engineered infrared fluorescent proteins (IFPs) based on the chromophore-binding domain of the Deinococcus radiodurans bacteriophytochrome. Our study suggests that the experimentally observed enhancement of fluorescent properties results from the improved rigidity and planarity of the biliverdin chromophore, in particular of the first two pyrrole rings neighboring the covalent linkage to the protein. We propose that the increases in the levels of both motion and bending of the chromophore out of planarity favor the decrease in fluorescence. The chromophore-binding pocket in some of the studied proteins, in particular the weakly fluorescent parent protein, is shown to be readily accessible to water molecules from the solvent. These waters entering the chromophore region form hydrogen bond networks that affect the otherwise planar conformation of the first three rings of the chromophore. On the basis of our simulations, the enhancement of fluorescence in IFPs can be achieved either by reducing the mobility of water molecules in the vicinity of the chromophore or by limiting the interactions of the nearby protein residues with the chromophore. Finally, simulations performed at both low and neutral pH values highlight differences in the dynamics of the chromophore and shed light on the mechanism of fluorescence loss at low pH.


Subject(s)
Bacterial Proteins/chemistry , Luminescent Proteins/chemistry , Bacterial Proteins/genetics , Biliverdine/chemistry , Crystallography, X-Ray , Deinococcus/chemistry , Deinococcus/genetics , Fluorescence , Infrared Rays , Luminescent Proteins/genetics , Models, Molecular , Molecular Dynamics Simulation , Phytochrome/chemistry , Protein Engineering , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Static Electricity
12.
J Biol Chem ; 291(29): 15020-8, 2016 07 15.
Article in English | MEDLINE | ID: mdl-27226614

ABSTRACT

Exposure of bacteria to NO results in the nitrosylation of cysteine thiols in proteins and low molecular weight thiols such as GSH. The cells possess enzymatic systems that catalyze the denitrosylation of these modified sulfurs. An important player in these systems is thioredoxin (Trx), a ubiquitous, cytoplasmic oxidoreductase that can denitrosylate proteins in vivo and S-nitrosoglutathione (GSNO) in vitro However, a periplasmic or extracellular denitrosylase has not been identified, raising the question of how extracytoplasmic proteins are repaired after nitrosative damage. In this study, we tested whether DsbG and DsbC, two Trx family proteins that function in reducing pathways in the Escherichia coli periplasm, also possess denitrosylating activity. Both DsbG and DsbC are poorly reactive toward GSNO. Moreover, DsbG is unable to denitrosylate its specific substrate protein, YbiS. Remarkably, by borrowing the CGPC active site of E. coli Trx-1 in combination with a T200M point mutation, we transformed DsbG into an enzyme highly reactive toward GSNO and YbiS. The pKa of the nucleophilic cysteine, as well as the redox and thermodynamic properties of the engineered DsbG are dramatically changed and become similar to those of E. coli Trx-1. X-ray structural insights suggest that this results from a loss of two direct hydrogen bonds to the nucleophilic cysteine sulfur in the DsbG mutant. Our results highlight the plasticity of the Trx structural fold and reveal that the subtle change of the number of hydrogen bonds in the active site of Trx-like proteins is the key factor that thermodynamically controls reactivity toward nitrosylated compounds.


Subject(s)
Escherichia coli Proteins/metabolism , Oxidoreductases/metabolism , Periplasmic Proteins/metabolism , Thioredoxins/metabolism , Binding Sites , Cysteine , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/genetics , Hydrogen Bonding , Hydrogen-Ion Concentration , Models, Molecular , Mutagenesis, Site-Directed , Nitrosation , Oxidoreductases/chemistry , Oxidoreductases/genetics , Periplasmic Proteins/chemistry , Periplasmic Proteins/genetics , Protein Engineering , Protein Stability , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , S-Nitrosoglutathione/metabolism , Sulfur/metabolism , Thioredoxins/chemistry , Thioredoxins/genetics
13.
Nat Commun ; 5: 3626, 2014 May 15.
Article in English | MEDLINE | ID: mdl-24832154

ABSTRACT

Infrared fluorescent proteins (IFPs) are ideal for in vivo imaging, and monomeric versions of these proteins can be advantageous as protein tags or for sensor development. In contrast to GFP, which requires only molecular oxygen for chromophore maturation, phytochrome-derived IFPs incorporate biliverdin (BV) as the chromophore. However, BV varies in concentration in different cells and organisms. Here we engineered cells to express the haeme oxygenase responsible for BV biosynthesis and a brighter monomeric IFP mutant (IFP2.0). Together, these tools improve the imaging capabilities of IFP2.0 compared with monomeric IFP1.4 and dimeric iRFP. By targeting IFP2.0 to the plasma membrane, we demonstrate robust labelling of neuronal processes in Drosophila larvae. We also show that this strategy improves the sensitivity when imaging brain tumours in whole mice. Our work shows promise in the application of IFPs for protein labelling and in vivo imaging.


Subject(s)
Brain Neoplasms/diagnosis , Fluorescent Dyes/metabolism , Luminescent Proteins/metabolism , Neuroimaging/methods , Neurons/metabolism , Animals , Biliverdine/metabolism , Brain Neoplasms/metabolism , Crystallography, X-Ray , Drosophila , HEK293 Cells , Heme Oxygenase (Decyclizing)/metabolism , Humans , Infrared Rays , Larva , Mice , Microscopy, Confocal , Phytochrome , Rats
14.
Biochem Biophys Res Commun ; 446(1): 341-6, 2014 Mar 28.
Article in English | MEDLINE | ID: mdl-24607898

ABSTRACT

Recent studies have demonstrated that the modified base 5-hydroxymethylcytosine (5-hmC) is detectable at various rates in DNA extracted from human tissues. This oxidative product of 5-methylcytosine (5-mC) constitutes a new and important actor of epigenetic mechanisms. We designed a DNA pull down assay to trap and identify nuclear proteins bound to 5-hmC and/or 5-mC. We applied this strategy to three cancerous cell lines (HeLa, SH-SY5Y and UT7-MPL) in which we also measured 5-mC and 5-hmC levels by HPLC-MS/MS. We found that the putative oncoprotein Zinc finger and BTB domain-containing protein 2 (ZBTB2) is associated with methylated DNA sequences and that this interaction is inhibited by the presence of 5-hmC replacing 5-mC. As published data mention ZBTB2 recognition of p21 regulating sequences, we verified that this sequence specific binding was also alleviated by 5-hmC. ZBTB2 being considered as a multifunctional cell proliferation activator, notably through p21 repression, this work points out new epigenetic processes potentially involved in carcinogenesis.


Subject(s)
DNA Methylation , DNA, Neoplasm/genetics , DNA, Neoplasm/metabolism , Repressor Proteins/metabolism , 5-Methylcytosine/metabolism , Cell Line, Tumor , CpG Islands , Cyclin-Dependent Kinase Inhibitor p21/metabolism , Cytosine/analogs & derivatives , Cytosine/metabolism , DNA, Neoplasm/chemistry , Epigenesis, Genetic , HeLa Cells , Humans , Protein Binding
15.
J Mol Biol ; 392(4): 952-66, 2009 Oct 02.
Article in English | MEDLINE | ID: mdl-19631659

ABSTRACT

Bacterial virulence depends on the correct folding of surface-exposed proteins, a process catalyzed by the thiol-disulfide oxidoreductase DsbA, which facilitates the synthesis of disulfide bonds in Gram-negative bacteria. The Neisseria meningitidis genome possesses three genes encoding active DsbAs: DsbA1, DsbA2 and DsbA3. DsbA1 and DsbA2 have been characterized as lipoproteins involved in natural competence and in host interactive biology, while the function of DsbA3 remains unknown. This work reports the biochemical characterization of the three neisserial enzymes and the crystal structures of DsbA1 and DsbA3. As predicted by sequence homology, both enzymes adopt the classic Escherichia coli DsbA fold. The most striking feature shared by all three proteins is their exceptional oxidizing power. With a redox potential of -80 mV, the neisserial DsbAs are the most oxidizing thioredoxin-like enzymes known to date. Consistent with these findings, thermal studies indicate that their reduced form is also extremely stable. For each of these enzymes, this study shows that a threonine residue found within the active-site region plays a key role in dictating this extraordinary oxidizing power. This result highlights how residues located outside the CXXC motif may influence the redox potential of members of the thioredoxin family.


Subject(s)
Neisseria meningitidis/enzymology , Protein Disulfide Reductase (Glutathione)/chemistry , Crystallography, X-Ray , Enzyme Stability , Models, Molecular , Mutagenesis, Site-Directed , Oxidation-Reduction , Protein Disulfide Reductase (Glutathione)/metabolism , Protein Disulfide Reductase (Glutathione)/physiology , Protein Structure, Tertiary/physiology , Sequence Homology, Amino Acid , Structure-Activity Relationship , Thermodynamics
16.
Article in English | MEDLINE | ID: mdl-18259062

ABSTRACT

Bacterial virulence depends on the correct folding of surface-exposed proteins, a process that is catalyzed by the thiol-disulfide oxidoreductase DsbA, which facilitates the synthesis of disulfide bonds in Gram-negative bacteria. Uniquely among bacteria, the Neisseria meningitidis genome possesses three genes encoding active DsbAs: DsbA1, DsbA2 and DsbA3. DsbA1 and DsbA2 have been characterized as lipoproteins involved in natural competence and in host-interactive biology, while the function of DsbA3 remains unknown. In an attempt to shed light on the reason for this multiplicity of dsbA genes, the three enzymes from N. meningitidis have been purified and crystallized in the presence of high concentrations of ammonium sulfate. The best crystals were obtained using DsbA1 and DsbA3; they belong to the orthorhombic and tetragonal systems and diffract to 1.5 and 2.7 A resolution, respectively.


Subject(s)
Neisseria meningitidis/enzymology , Protein Disulfide-Isomerases/chemistry , Amino Acid Sequence , Chromatography, Gel , Crystallography, X-Ray , Electrophoresis, Polyacrylamide Gel , Molecular Sequence Data , Protein Conformation , Protein Disulfide-Isomerases/isolation & purification , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification
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