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1.
Microbiol Spectr ; 11(3): e0535222, 2023 06 15.
Article in English | MEDLINE | ID: mdl-37227147

ABSTRACT

Enteroviruses are a group of positive single-stranded viruses that belong to the Picornaviridae family. They regularly infect humans and cause symptoms ranging from the common cold and hand-foot-and-mouth disease to life-threatening conditions, such as dilated cardiomyopathy and poliomyelitis. Enteroviruses have also been associated with chronic immune-mediated diseases, such as type 1 diabetes, celiac disease, and asthma. Studying these disease-pathogen connections is challenging due to the high prevalence of enterovirus infections in the population and the transient appearance of the virus during the acute infection phase, which limit the identification of the causative agent via methods based on the virus genome. Serological assays can detect the antibodies induced by acute and past infections, which is useful when direct virus detection is not possible. We describe in this immuno-epidemiological study how the antibody levels against VP1 proteins from eight different enterovirus types, representing all seven of the human infecting enterovirus species, vary over time. VP1 responses first significantly (P < 0.001) decline until 6 months of age, reflecting maternal antibodies, and they then start to increase as the infections accumulate and the immune system develops. All 58 children in this study were selected from the DiabImmnune cohort for having PCR-confirmed enterovirus infections. Additionally, we show that there is great, although not complete, cross-reactivity of VP1 proteins from different enteroviruses and that the response against 3C-pro could reasonably well reflect the recent Enterovirus infection history (ρ = 0.94, P = 0.017). The serological analysis of enterovirus antibodies in sera from children paves the way for the development of tools for monitoring the Enterovirus epidemics and associated diseases. IMPORTANCE Enteroviruses cause a wide variety of symptoms ranging from a mild rash and the common cold to paralyzing poliomyelitis. While enteroviruses are among the most common human pathogens, there is a need for new, affordable serological assays with which to study pathogen-disease connections in large cohorts, as enteroviruses have been linked to several chronic illnesses, such as type 1 diabetes mellitus and asthma exacerbations. However, proving causality remains an issue. In this study, we describe the use of an easily customizable multiplexed assay that is based on structural and nonstructural enterovirus proteins to study antibody responses in a cohort of 58 children from birth to 3 years of age. We demonstrate how declining maternal antibody levels can obscure the serological detection of enteroviruses before the age of six months and how antibody responses to nonstructural enterovirus proteins could be interesting targets for serodiagnosis.


Subject(s)
Common Cold , Enterovirus Infections , Enterovirus , Poliomyelitis , Child , Animals , Humans , Child, Preschool , Infant , Enterovirus/genetics , Enterovirus Infections/diagnosis , Enterovirus Infections/epidemiology , Antigens, Viral , Antibodies, Viral , Immunoassay
2.
Sci Rep ; 12(1): 6518, 2022 04 20.
Article in English | MEDLINE | ID: mdl-35444249

ABSTRACT

Urbanization reduces microbiological abundance and diversity, which has been associated with immune mediated diseases. Urban greening may be used as a prophylactic method to restore microbiological diversity in cities and among urbanites. This study evaluated the impact of air-circulating green walls on bacterial abundance and diversity on human skin, and on immune responses determined by blood cytokine measurements. Human subjects working in offices in two Finnish cities (Lahti and Tampere) participated in a two-week intervention, where green walls were installed in the rooms of the experimental group. Control group worked without green walls. Skin and blood samples were collected before (Day0), during (Day14) and two weeks after (Day28) the intervention. The relative abundance of genus Lactobacillus and the Shannon diversity of phylum Proteobacteria and class Gammaproteobacteria increased in the experimental group. Proteobacterial diversity was connected to the lower proinflammatory cytokine IL-17A level among participants in Lahti. In addition, the change in TGF-ß1 levels was opposite between the experimental and control group. As skin Lactobacillus and the diversity of Proteobacteria and Gammaproteobacteria are considered advantageous for skin health, air-circulating green walls may induce beneficial changes in a human microbiome. The immunomodulatory potential of air-circulating green walls deserves further research attention.


Subject(s)
Microbiota , Bacteria , Cytokines , Humans , Lactobacillus , Skin
3.
Sci Adv ; 6(19): eaaz2433, 2020 05.
Article in English | MEDLINE | ID: mdl-32494709

ABSTRACT

Coxsackievirus B (CVB) enteroviruses are common human pathogens known to cause severe diseases including myocarditis, chronic dilated cardiomyopathy, and aseptic meningitis. CVBs are also hypothesized to be a causal factor in type 1 diabetes. Vaccines against CVBs are not currently available, and here we describe the generation and preclinical testing of a novel hexavalent vaccine targeting the six known CVB serotypes. We show that the vaccine has an excellent safety profile in murine models and nonhuman primates and that it induces strong neutralizing antibody responses to the six serotypes in both species without an adjuvant. We also demonstrate that the vaccine provides immunity against acute CVB infections in mice, including CVB infections known to cause virus-induced myocarditis. In addition, it blocks CVB-induced diabetes in a genetically permissive mouse model. Our preclinical proof-of-concept studies demonstrate the successful generation of a promising hexavalent CVB vaccine with high immunogenicity capable of preventing CVB-induced diseases.


Subject(s)
Coxsackievirus Infections , Myocarditis , Animals , Coxsackievirus Infections/prevention & control , Enterovirus B, Human , Mice , Primates , Vaccines, Combined
4.
Cell Mol Life Sci ; 63(24): 2992-3017, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17086379

ABSTRACT

Chicken avidin and bacterial streptavidin, (strept)avidin, are proteins widely utilized in a number of applications in life science, ranging from purification and labeling techniques to diagnostics, and from targeted drug delivery to nanotechnology. (Strept)avidin-biotin technology relies on the extremely tight and specific affinity between (strept)avidin and biotin (dissociation constant, K(d) approximately 10(-14)-10(-16) M). (Strept)avidins are also exceptionally stable proteins. To study their ligand binding and stability characteristics, the two proteins have been extensively modified both chemically and genetically. There are excellent accounts of this technology and chemically modified (strept)avidins, but no comprehensive reviews exist concerning genetically engineered (strept)avidins. To fill this gap, we here go through the genetically engineered (strept)avidins, summarizing how these constructs were designed and how they have improved our understanding of the structural and functional characteristics of these proteins, and the benefits they have provided for (strept)avidin-biotin technology.


Subject(s)
Avidin/chemistry , Protein Engineering , Streptavidin/chemistry , Amino Acid Sequence , Animals , Avidin/genetics , Binding Sites , Chickens , Models, Molecular , Molecular Sequence Data , Mutation , Protein Structure, Secondary , Protein Structure, Tertiary , Recombinant Fusion Proteins/chemistry , Sequence Homology, Amino Acid , Streptavidin/genetics , Structure-Activity Relationship
5.
Acta Crystallogr D Biol Crystallogr ; 57(Pt 12): 1885-6, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11717505

ABSTRACT

Bacterial streptavidin and chicken avidin are homotetrameric proteins that share an exceptionally high affinity towards the vitamin biotin. The biotin-binding sites in both proteins contain a crucial tryptophan residue contributed from an adjacent subunit. This particular tryptophan (W110 in avidin and W120 in streptavidin) plays an important role in both biotin binding and in the quaternary stabilities of the proteins. An intriguing naturally occurring alteration of tryptophan to lysine was previously described in the C-terminal domain of sea-urchin fibropellins, which share a relatively high sequence similarity with avidin and streptavidin. Avidin (Avm-W110K) and streptavidin (Savm-W120K) mutations show substantially reduced affinities towards biotin as well as the dissociation of their tetrameric structure into stable avidin and streptavidin dimers. Savm-W120K was crystallized at 293 K using the hanging-drop vapour-diffusion method. The crystals diffract to 1.7 A resolution using synchrotron radiation and belong to the monoclinic space group P2(1), with unit-cell parameters a = 50.43, b = 100.41, c = 52.51 A, beta = 112.12 degrees. The asymmetric unit contains four molecules of Savm-W120K, with a corresponding V(M) of 2.3 A(3) Da(-1) and a solvent content of 46%.


Subject(s)
Bacterial Proteins/chemistry , Streptavidin/chemistry , Amino Acid Substitution , Baculoviridae/genetics , Crystallization , Crystallography, X-Ray , Lysine/genetics , Mutation , Protein Conformation , Streptavidin/genetics , Tryptophan/genetics
6.
Biochem Biophys Res Commun ; 285(3): 734-41, 2001 Jul 20.
Article in English | MEDLINE | ID: mdl-11453655

ABSTRACT

The chicken avidin gene family comprises the avidin gene (avd) and several homologous avidin-related genes (avrs). The sequences of the avr genes are nearly identical to each other but exhibit nonrandomly distributed, frequently nonsynonymous nucleotide substitutions compared to avd. In this study, we determined the genetic distances and the phylogeny of the avd and avr genes and found differences between different exons and introns. Our results suggest the involvement of biased gene conversion in the evolution of the genes. Furthermore, one of the genes was identified as a putative fusion gene. The occurrence of both gene conversion and recombination supports the models suggesting a common initiation mechanism for conversion and crossing-over. The existence of avidin-related proteins (AVRs) is currently unknown, but the putative AVRs are expected to bind biotin similarly to avidin. However, the observed sequence differences may affect the stability and glycosylation patterns of the putative AVR proteins.


Subject(s)
Avidin/genetics , Evolution, Molecular , Multigene Family/genetics , Phylogeny , Sequence Analysis, DNA , Alleles , Animals , Avidin/classification , Chickens , Exons/genetics , Gene Conversion/genetics , Genetic Variation , Introns/genetics
7.
J Biol Chem ; 276(11): 8219-24, 2001 Mar 16.
Article in English | MEDLINE | ID: mdl-11076945

ABSTRACT

Chicken avidin, a homotetramer that binds four molecules of biotin was converted to a monomeric form by successive mutations of interface residues to alanine. The major contribution to monomer formation was the mutation of two aspartic acid residues, which together account for ten hydrogen bonding interactions at the 1-4 interface. Mutation of these residues, together with the three hydrophobic residues at the 1-3 interface, led to stable monomer formation in the absence of biotin. Upon addition of biotin, the monomeric avidin reassociated to the tetramer, which exhibited properties similar to those of native avidin, with respect to biotin binding, thermostability, and protease resistance. To our knowledge, these unexpected results represent the first example of a small monovalent ligand that induces oligomerization of a monomeric protein. This study may suggest a biological role for low molecular weight ligands in inducing oligomerization and in maintaining the stability of multimeric protein assemblies.


Subject(s)
Avidin/chemistry , Biotin/chemistry , Models, Molecular , Protein Subunits , Recombinant Proteins/chemistry
8.
Gene Ther ; 7(17): 1499-504, 2000 Sep.
Article in English | MEDLINE | ID: mdl-11001370

ABSTRACT

Recombinant Autographa californica multiple nuclear polyhedrosis viruses (AcMNPV) have recently been shown to transduce mammalian cells in vitro. Since baculoviruses offer many advantages over viruses currently used in gene therapy, we have tested them for in vivo gene transfer by constructing a baculovirus bearing a nuclear targeted beta-galactosidase marker gene (LacZ) under a CMV promoter. Both rabbit aortic smooth muscle cells (RAASMC) and human ECV-304 cells were susceptible to LacZ-baculovirus transduction. Transgene expression was evaluated in vivo by applying 1 x 10(9) p.f.u. of LacZ-baculoviruses or LacZ-adenoviruses in a silastic collar placed around rabbit carotid arteries in the absence of contact with blood components. As a result, baculoviruses led to transgene expression in adventitial cells in rabbit carotid arteries with efficiency comparable to adenoviruses. The beta-galactosidase gene expression was transient staying at a high level for 1 week but disappearing at the 14 day time-point. The arterial structure and endothelium remained intact in the baculovirus-transduced arteries, but macrophage-specific immunostaining detected signs of inflammation comparable to adenoviruses. Baculoviruses are thus able to mediate transient gene transfer in vivo and may become useful tools for gene therapy.


Subject(s)
Baculoviridae/genetics , Carotid Arteries , Genetic Therapy/methods , Genetic Vectors/administration & dosage , Transfection/methods , Animals , Gene Expression , Humans , Male , Muscle, Smooth, Vascular/enzymology , Muscle, Smooth, Vascular/immunology , Rabbits , Reverse Transcriptase Polymerase Chain Reaction , beta-Galactosidase/genetics
9.
FEBS Lett ; 467(1): 31-6, 2000 Feb 04.
Article in English | MEDLINE | ID: mdl-10664451

ABSTRACT

A recombinant non-glycosylated and acidic form of avidin was designed and expressed in soluble form in baculovirus-infected insect cells. The mutations were based on the same principles that guided the design of the chemically and enzymatically modified avidin derivative, known as NeutraLite Avidin. In this novel recombinant avidin derivative, five out of the eight arginine residues were replaced with neutral amino acids, and two of the lysine residues were replaced by glutamic acid. In addition, the carbohydrate-bearing asparagine-17 residue was altered to an isoleucine, according to the known sequences of avidin-related genes. The resultant mutant protein, termed recombinant NeutraLite Avidin, exhibited superior properties compared to those of avidin, streptavidin and the conventional NeutraLite Avidin, prepared by chemo-enzymatic means. In this context, the recombinant mutant is a single molecular species, which possesses strong biotin-binding characteristics. Due to its acidic pI, it is relatively free from non-specific binding to DNA and cells. The recombinant NeutraLite Avidin retains seven lysines per subunit, which are available for further conjugation and derivatization.


Subject(s)
Avidin/chemistry , Avidin/metabolism , Biotin/metabolism , Mutation/genetics , Protein Engineering , Amino Acid Sequence , Amino Acid Substitution/genetics , Animals , Avidin/genetics , Avidin/isolation & purification , Baculoviridae/genetics , Baculoviridae/metabolism , Biotin/analogs & derivatives , Cells, Cultured , Chick Embryo , DNA/metabolism , Endopeptidase K/metabolism , Glycosylation , Humans , Isoelectric Point , Kinetics , Molecular Sequence Data , Protein Binding , Protein Structure, Quaternary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Thermodynamics
10.
FEBS Lett ; 461(1-2): 52-8, 1999 Nov 12.
Article in English | MEDLINE | ID: mdl-10561495

ABSTRACT

Sea urchin fibropellins are epidermal growth factor homologues that harbor a C-terminal domain, similar in sequence to hen egg-white avidin and bacterial streptavidin. The fibropellin sequence was used as a conceptual template for mutation of designated conserved tryptophan residues in the biotin-binding sites of the tetrameric proteins, avidin and streptavidin. Three different mutations of avidin, Trp-110-Lys, Trp-70-Arg and the double mutant, were expressed in a baculovirus-infected insect cell system. A mutant of streptavidin, Trp-120-Lys, was similarly expressed. The homologous tryptophan to lysine (W-->K) mutations of avidin and streptavidin were both capable of binding biotin and biotinylated material. Their affinity for the vitamin was, however, significantly reduced: from K(d) approximately 10(-15) M of the wild-type tetramer down to K(d) approximately 10(-8) M for both W-->K mutants. In fact, their binding to immobilized biotin matrices could be reversed by the presence of free biotin. The Trp-70-Arg mutant of avidin bound biotin very poorly and the double mutant (which emulates the fibropellin domain) failed to bind biotin at all. Using a gel filtration fast-protein liquid chromatography assay, both W-->K mutants were found to form stable dimers in solution. These findings may indicate that mimicry in the nature of the avidin sequence and fold by the fibropellins is not designed to generate biotin-binding, but may serve to secure an appropriate structure for facilitating dimerization.


Subject(s)
Avidin/genetics , Epidermal Growth Factor/genetics , Extracellular Matrix Proteins/genetics , Lysine/genetics , Mutation , Streptavidin/genetics , Tryptophan/genetics , Animals , Binding Sites , Biotin/genetics , Chromatography, Liquid , Enzyme-Linked Immunosorbent Assay , Kinetics , Protein Binding , Recombinant Proteins/genetics , Sea Urchins , Temperature , Time Factors
11.
Protein Expr Purif ; 17(1): 139-45, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10497079

ABSTRACT

The baculovirus expression vector system (BEVS) has become one of the most versatile and powerful eukaryotic systems for recombinant protein expression. We have constructed a novel baculovirus transfer vector (pbacAVs+C) which allows for the efficient production, detection, and single-step purification of the desired molecule as a secretion-compatible avidin fusion protein in insect cells. It also enables fast construction of the baculoviruses by site-specific transposition in Escherichia coli. To demonstrate the power of this vector, we report here on the production of immunologically intact hevein, a major cysteine-rich latex allergen, as avidin fusion protein. Our results indicate that avidin is a stable and versatile tag in the BEVS. It retains its extraordinarily high biotin-binding activity and also enables independent folding of the fusion partner. The versatility with which avidin fusion proteins can be detected, purified, and immobilized is the basis for the use of our system as a useful alternative in eukaryotic fusion protein production.


Subject(s)
Antimicrobial Cationic Peptides , Avidin/biosynthesis , Avidin/genetics , Baculoviridae/genetics , Plant Lectins , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/genetics , Amino Acid Sequence , Animals , Avidin/isolation & purification , Base Sequence , Binding Sites/genetics , Cell Line , DNA Primers/genetics , Enteropeptidase , Gene Expression , Genetic Vectors , Lectins/biosynthesis , Lectins/genetics , Lectins/isolation & purification , Molecular Sequence Data , Plant Proteins/biosynthesis , Plant Proteins/genetics , Plant Proteins/isolation & purification , Plasmids/genetics , Recombinant Fusion Proteins/isolation & purification , Spodoptera
12.
FEBS Lett ; 441(2): 313-7, 1998 Dec 18.
Article in English | MEDLINE | ID: mdl-9883906

ABSTRACT

Avidin, a positively charged egg-white glycoprotein, is a widely used tool in biotechnological applications because of its ability to bind biotin strongly. The high pI of avidin (approximately 10.5), however, is a hindrance in certain applications due to non-specific (charge-related) binding. Here we report a construction of a series of avidin charge mutants with pIs ranging from 9.4 to 4.7. Rational design of the avidin mutants was based on known crystallographic data together with comparative sequence alignment of avidin, streptavidin and a set of avidin-related genes which occur in the chicken genome. All charge mutants retained the ability to bind biotin tightly according to optical biosensor interaction analysis. In most cases, their thermal stability characteristics were indistinguishable from those of the wild-type avidin. Our results demonstrate that the charge properties of avidin can be modified without disturbing the crucial biotin-binding activity.


Subject(s)
Avidin/chemistry , Protein Engineering , Animals , Avidin/genetics , Avidin/metabolism , Biotin/metabolism , Chickens , DNA, Complementary , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Hot Temperature , Mutagenesis, Site-Directed , Spodoptera
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