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1.
J Biomol Struct Dyn ; 40(15): 6817-6830, 2022 09.
Article in English | MEDLINE | ID: mdl-33616012

ABSTRACT

Lectins are a class of proteins or glycoproteins capable of recognizing and interacting with carbohydrates in a specific and reversible manner. Owing to this property, these proteins can interact with glycoconjugates present on the cell surface, making it possible to decipher the glycocode, as well as elicit biological effects, such as inflammation and vasorelaxation. Here, we report a structural and biological study of the mannose/glucose-specific lectin from Dioclea lasiophylla seeds, DlyL. The study aimed to evaluate in detail the interaction of DlyL with Xman and high-mannose N-glycans (MAN3, MAN5 and MAN9) by molecular dynamics (MD) and the resultant in vitro effect on vasorelaxation using rat aortic rings. In silico analysis of molecular docking was performed to obtain the initial coordinates of the DlyL complexes with the carbohydrates to apply as inputs in MD simulations. The MD trajectories demonstrated the stability of DlyL over time as well as different profiles of interaction with Xman and N-glycans. Furthermore, aortic rings assays demonstrated that the lectin could relax pre-contracted aortic rings with the participation of the carbohydrate recognition domain (CRD) and nitric oxide (NO) when endothelial tissue is preserved. These results confirm the ability of DlyL to interact with high-mannose N-glycans with its expanded CRD, supporting the hypothesis that DlyL vasorelaxant activity occurs primarily through its interaction with cell surface glycosylated receptors.Communicated by Ramaswamy H. Sarma.


Subject(s)
Dioclea , Animals , Carbohydrates/chemistry , Dioclea/chemistry , Dioclea/metabolism , Lectins , Mannose/chemistry , Molecular Docking Simulation , Plant Lectins/analysis , Plant Lectins/chemistry , Plant Lectins/pharmacology , Polysaccharides/pharmacology , Rats , Seeds/chemistry , Seeds/metabolism , Vasodilator Agents/analysis , Vasodilator Agents/chemistry , Vasodilator Agents/pharmacology
2.
Int J Biol Macromol ; 107(Pt A): 236-246, 2018 Feb.
Article in English | MEDLINE | ID: mdl-28867234

ABSTRACT

A native lectin (nPELa), purified from seeds of the species Platypodium elegans, Dalbergieae tribe, was crystallized and structurally characterized by X-ray diffraction crystallography and bioinformatics tools. The obtained crystals diffracted to 1.6Å resolution, and nPELa structure were solved through molecular substitution. In addition, nPELa has a metal binding site and a conserved carbohydrate recognition domain (CRD) similar to other Dalbergieae tribe lectins, such as PAL (Pterocarpus angolensis) and CTL (Centrolobium tomentosum). Molecular docking analysis indicated high affinity of this lectin for different mannosides, mainly trimannosides, formed by α-1,3 or α-1,6 glycosidic bond, as evidenced by the obtained scores. In addition, molecular dynamics simulations were performed to demonstrate the structural behavior of nPELa in aqueous solution. In solution, nPELa was highly stable, and structural modifications in its carbohydrate recognition site allowed interaction between the lectin and the different ligands. Different modifications were observed during simulations for each one of the glycans, which included different hydrogen bonds and hydrophobic interactions through changes in the relevant residues. In addition, nPELa was evaluated for its nociceptive activity in mice and was reported to be the first lectin of the Dalbergieae tribe to show CRD-dependent hypernociceptive activity.


Subject(s)
Fabaceae/chemistry , Nociceptive Pain/drug therapy , Plant Lectins/chemistry , Polysaccharides/chemistry , Animals , Binding Sites , Computational Biology , Crystallography, X-Ray , Hydrogen Bonding , Mannosides/chemistry , Mice , Molecular Docking Simulation , Molecular Dynamics Simulation , Molecular Structure , Nociceptive Pain/pathology , Plant Lectins/administration & dosage , Seeds/chemistry
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