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1.
Clin Genet ; 88(3): 283-7, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25358429

ABSTRACT

The aim of this study is to investigate the genetic basis of autosomal recessive congenital cataract and intellectual disability phenotype in a consanguineous Tunisian family. The whole genome scan of the studied family was performed with single nucleotide polymorphisms (SNPs). The resulted runs of homozygosity (ROH) were analyzed through the integrated Systems Tool for Eye gene discovery (iSyTE) in order to prioritize candidate genes associated with congenital cataract. Selected genes were amplified and sequenced. Bioinformatic analysis was conducted to predict the function of the mutant gene. We identified a new specific lens gene named syntaxin 3 linked to the studied phenotype. The direct sequencing of this gene revealed a novel missense mutation c.122A>G which results in p.E41G. Bioinformatic analysis suggested a deleterious effect of this mutation on protein structure and function. Here, we report for the first time a missense mutation of a novel lens specific gene STX3 in a phenotype associating autosomal recessive congenital cataract and intellectual disability.


Subject(s)
Cataract/diagnosis , Cataract/genetics , Consanguinity , Genes, Recessive , Intellectual Disability/diagnosis , Intellectual Disability/genetics , Phenotype , Qa-SNARE Proteins/genetics , Adolescent , DNA Mutational Analysis , Female , Homozygote , Humans , Magnetic Resonance Imaging , Male , Pedigree , Tunisia , Young Adult
2.
Clin Genet ; 87(2): 155-60, 2015 Feb.
Article in English | MEDLINE | ID: mdl-24372583

ABSTRACT

The contribution of BRCA1/BRCA2 mutations to hereditary breast cancer in the Tunisian population has not been accurately estimated. The purpose of our study was to estimate the incidence and spectrum of pathogenic mutations in BRCA1/2 genes in early onset and familial breast/ovarian cancer among Tunisian women. To identify predictive factors for BRCA1/2 mutations, we screened the entire coding sequences and intron/exon boundaries of BRCA1/BRCA2 genes in 48 patients by direct sequencing. Twelve pathogenic mutations were detected (25%); three in BRCA1 (c.211dupA in four families, c.5266dupC in three families and c.1504_1508delTTAAA in one family) and two novel mutations in BRCA2 (c.1313dupT in two families and c.7654dupT in two families). We also identified 23 different polymorphisms and unclassified variants. These results indicate that our population has a spectrum of recurrent BRCA mutations.


Subject(s)
BRCA1 Protein/genetics , BRCA2 Protein/genetics , Breast Neoplasms/genetics , Ovarian Neoplasms/genetics , Adult , Breast Neoplasms/epidemiology , Female , Humans , Mutation , Ovarian Neoplasms/epidemiology , Tunisia
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