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1.
Am J Hum Genet ; 89(3): 398-406, 2011 Sep 09.
Article in English | MEDLINE | ID: mdl-21907011

ABSTRACT

Genome-wide analysis of a multi-incident family with autosomal-dominant parkinsonism has implicated a locus on chromosomal region 3q26-q28. Linkage and disease segregation is explained by a missense mutation c.3614G>A (p.Arg1205His) in eukaryotic translation initiation factor 4-gamma (EIF4G1). Subsequent sequence and genotype analysis identified EIF4G1 c.1505C>T (p.Ala502Val), c.2056G>T (p.Gly686Cys), c.3490A>C (p.Ser1164Arg), c.3589C>T (p.Arg1197Trp) and c.3614G>A (p.Arg1205His) substitutions in affected subjects with familial parkinsonism and idiopathic Lewy body disease but not in control subjects. Despite different countries of origin, persons with EIF4G1 c.1505C>T (p.Ala502Val) or c.3614G>A (p.Arg1205His) mutations appear to share haplotypes consistent with ancestral founders. eIF4G1 p.Ala502Val and p.Arg1205His disrupt eIF4E or eIF3e binding, although the wild-type protein does not, and render mutant cells more vulnerable to reactive oxidative species. EIF4G1 mutations implicate mRNA translation initiation in familial parkinsonism and highlight a convergent pathway for monogenic, toxin and perhaps virally-induced Parkinson disease.


Subject(s)
Chromosomes, Human, Pair 3/genetics , Eukaryotic Initiation Factor-4G/genetics , Parkinson Disease/genetics , Protein Biosynthesis/genetics , Base Sequence , Cloning, Molecular , DNA Copy Number Variations , DNA Mutational Analysis , Flow Cytometry , Genetic Linkage , Genotype , Humans , Immunoprecipitation , Mitochondria/physiology , Molecular Sequence Data , Mutation, Missense/genetics , Pedigree
2.
Hum Mutat ; 32(4): E2079-90, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21412942

ABSTRACT

Genomic multiplication of the alpha-synuclein gene (SNCA) locus is one cause of familial Parkinson disease (PD). We performed detailed genomic, SNCA expression level, clinical, neuropsychological and functional imaging analyses of a parkinsonian kindred with a known duplication of the SNCA locus. We demonstrated that the duplication spanned 4.928 Mb (encompassing 31 known and putative genes) and was the largest to have been described at this locus. The presence of several repetitive long interspersed nuclear elements (LINEs) flanking the potential break area suggested that the duplication resulted from a genomic recombination between LINEs. We sequenced the break junction and confirmed the involvement of L1PA2 and L1PA4 in a non-allelic, homologous recombination. An analysis of mRNA levels in immortalized lymphoblastoid cells and peripheral blood mononuclear cells showed SNCA overexpression in subjects with the duplication, as well as overexpression of 13 other genes highlighting the usefulness of such cell models to study this duplication. Interestingly, abnormal tracer uptake in DaTSCAN(®) imaging correlated with the severity of the clinical symptoms. Our detailed genomic analysis and clinical exploration enabled us to specify the genotype-phenotype relationship, identify a case of presymptomatic PD and gain insight into the role of LINEs in SNCA locus duplication.


Subject(s)
Gene Duplication , Long Interspersed Nucleotide Elements/genetics , Parkinson Disease/genetics , Phenotype , alpha-Synuclein/genetics , Base Sequence , Genetic Predisposition to Disease , Humans , Models, Genetic , Molecular Sequence Data , Pedigree
3.
Neurobiol Aging ; 32(10): 1839-48, 2011 Oct.
Article in English | MEDLINE | ID: mdl-20096956

ABSTRACT

To gain insight into systemic molecular events associated with an age-related neurodegenerative disorder, we compared gene expression patterns in peripheral blood mononuclear cells (PBMCs) sampled from elderly, healthy controls and from Parkinson's disease (PD) patients carrying the most frequently found mutation of the LRRK2 gene (G2019S). A transcriptomic approach enabled us to detect differentially expressed genes and revealed perturbations of pathways known to be involved in PD-related neurodegeneration: the ubiquitin-proteasome system, the mitochondrial oxidation system, inflammation, axonal guidance, calcium signalling and apoptosis. Moreover, alterations of the MAP kinase pathway, the actin cytoskeleton, the ephrin receptor system and vesicular transport - all recently associated with the LRRK2 G2019S mutation pathogenesis - were noted. Furthermore, we acquired new evidences of dysregulation in leukocyte extravasation signalling and immune system pathways in PD. These data show that the G2019S mutation affects the entire body and highlight some of the molecular events observed in the brain. This PBMC transcriptomic approach could be used to better understand neurodegeneration in PD and decipher new pathogenetic mechanisms, even at early stages of the disease.


Subject(s)
Cell Adhesion Molecules, Neuronal/genetics , Leukocytes, Mononuclear/metabolism , Mutation/genetics , Parkinson Disease/genetics , Parkinson Disease/pathology , Transcription Factors/metabolism , Aged , Aged, 80 and over , Female , Gene Expression Profiling/methods , Humans , Male , Middle Aged , Oligonucleotide Array Sequence Analysis/methods , Principal Component Analysis , Signal Transduction/genetics , Statistics as Topic , Transcription Factors/genetics , Young Adult
4.
Ann Neurol ; 63(6): 743-50, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18571778

ABSTRACT

OBJECTIVE: Copy number variation is a common polymorphic phenomenon within the human genome. Although the majority of these events are non-deleterious they can also be highly pathogenic. Herein we characterize five families with parkinsonism that have been identified to harbor multiplication of the chromosomal 4q21 locus containing the alpha-synuclein gene (SNCA). METHODS: A methodological approach using fluorescent in situ hybridization and Affymetrix (Santa Clara, CA) 250K SNP microarrays was used to characterize the multiplication in each family and to identify the genes encoded within the region. The telomeric and centromeric breakpoints of each family were further narrowed using semiquantitative polymerase chain reaction with microsatellite markers and then screened for transposable repeat elements. RESULTS: The severity of clinical presentation is correlated with SNCA dosage and does not appear to be overtly affected by the presence of other genes in the multiplicated region. With the exception of the Lister kindred, in each family the multiplication event appears de novo. The type and position of Alu/LINE repeats are also different at each breakpoint. Microsatellite analysis demonstrates two genomic mechanisms are responsible for chromosome 4q21 multiplications, including both SNCA duplication and recombination. INTERPRETATION: SNCA dosage is responsible for parkinsonism, autonomic dysfunction, and dementia observed within each family. We hypothesize dysregulated expression of wild-type alpha-synuclein results in parkinsonism and may explain the recent association of common SNCA variants in sporadic Parkinson's disease. SNCA genomic duplication results from intraallelic (segmental duplication) or interallelic recombination with unequal crossing over, whereas both mechanisms appear to be required for genomic SNCA triplication.


Subject(s)
Chromosomes, Human, Pair 4/genetics , Gene Dosage/genetics , Genetic Predisposition to Disease/genetics , Parkinson Disease/genetics , alpha-Synuclein/genetics , Adult , Aged , DNA Mutational Analysis , Female , Gene Duplication , Genetic Testing , Genome/genetics , Humans , Male , Microsatellite Repeats/genetics , Middle Aged , Parkinson Disease/metabolism , Parkinson Disease/physiopathology , Polymorphism, Single Nucleotide/genetics , Recombination, Genetic/genetics , alpha-Synuclein/metabolism
5.
Lancet ; 364(9440): 1167-9, 2004.
Article in English | MEDLINE | ID: mdl-15451224

ABSTRACT

Genomic triplication of the alpha-synuclein gene (SNCA) has been reported to cause hereditary early-onset parkinsonism with dementia. These findings prompted us to screen for multiplication of the SNCA locus in nine families in whom parkinsonism segregates as an autosomal dominant trait. One kindred was identified with SNCA duplication by semiquantitative PCR and confirmed by fluorescent in-situ hybridisation analysis in peripheral leucocytes. By contrast with SNCA triplication families, the clinical phenotype of SNCA duplication closely resembles idiopathic Parkinson's disease, which has a late age-of-onset, progresses slowly, and in which neither cognitive decline nor dementia are prominent. These findings suggest a direct relation between SNCA gene dosage and disease progression.


Subject(s)
Gene Duplication , Nerve Tissue Proteins/genetics , Parkinson Disease/genetics , Adult , Age of Onset , Aged , Aged, 80 and over , Female , Gene Dosage , Humans , In Situ Hybridization, Fluorescence , Lewy Body Disease/genetics , Male , Microsatellite Repeats , Middle Aged , Mutation, Missense , Parkinson Disease/diagnosis , Polymerase Chain Reaction , Synucleins , alpha-Synuclein
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