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1.
J Biol Chem ; 271(42): 26418-23, 1996 Oct 18.
Article in English | MEDLINE | ID: mdl-8824299

ABSTRACT

Topoisomerase II is an essential enzyme for proliferation of eukaryotic cells. It is also a target for many antineoplastic drugs that promote stabilization of covalent complexes between topoisomerase II and DNA. Topoisomerase II and protein kinases both catalyze the transfer of phosphoester bonds from nucleotides to proteins. This similarity suggests that inhibitors may affect both classes of enzymes. In the present study, we have examined the mechanism of topoisomerase II inhibition by three different classes of protein kinase inhibitors. We report that staurosporine inhibited the catalytic activity of topoisomerase II by blocking the transfer of phosphodiester bonds from DNA to the active tyrosine site, a mechanism of inhibition not previously reported for this enzyme. In contrast, other kinase inhibitors, such as methyl 2,5-dihydroxycinnamate, most likely inactivated topoisomerase II by alkylation of essential amino acids, whereas the mechanism of inhibition of bis-indolylmaleimide possibly involved a direct interaction with DNA.


Subject(s)
Enzyme Inhibitors/pharmacology , Protein Kinase Inhibitors , Staurosporine/pharmacology , Topoisomerase II Inhibitors , Adenosine Triphosphate/metabolism , Adenylyl Imidodiphosphate/pharmacology , Animals , Cinnamates/pharmacology , Crithidia fasciculata , DNA/metabolism , Diketopiperazines , Etoposide/pharmacology , Indoles/pharmacology , Maleimides/pharmacology , Piperazines/pharmacology
2.
Arch Immunol Ther Exp (Warsz) ; 42(1): 17-23, 1994.
Article in English | MEDLINE | ID: mdl-7503628

ABSTRACT

In this work we addressed the question if the difference in the mechanism by which 2-CdA kills resting and proliferating cells could be responsible for the therapeutic window of the drug. We show that 2-CdA triggers programmed cell death in proliferating human promyelocytic cell line, HL-60, human lymphocytic cell line, MOLT-4, and human peripheral blood lymphocytes stimulated to proliferation by PHA. Under our experimental conditions 2-CdA failed to induce apoptosis in the resting human peripheral blood lymphocytes despite induction of massive apoptosis in the same lymphocytes stimulated to proliferation by PHA. We also show that 2-CdA-induced apoptosis in HL-60 and MOLT-4 cells can not be prevented by addition of nicotinamide or inhibiting poly(ADP-ribose) synthetase by 3-aminobenzamide. In the case of HL-60 cells apoptosis is specific to the S phase of the cell cycle. Taking together these data suggest that selective induction of apoptosis in proliferating cells may be responsible for the therapeutic value of 2-CdA.


Subject(s)
Antimetabolites, Antineoplastic/pharmacology , Apoptosis/drug effects , Cladribine/pharmacology , Lymphocytes/cytology , Lymphocytes/drug effects , Antimetabolites, Antineoplastic/toxicity , Apoptosis/physiology , Cell Cycle/drug effects , Cell Division/drug effects , Cell Division/physiology , Cladribine/toxicity , DNA/drug effects , DNA/metabolism , DNA Damage , HL-60 Cells/drug effects , HL-60 Cells/metabolism , HL-60 Cells/pathology , Humans , Lymphocyte Activation/drug effects , Lymphocytes/metabolism , NAD/metabolism , Phytohemagglutinins/pharmacology , Poly(ADP-ribose) Polymerases/metabolism , Stimulation, Chemical , Vinblastine/pharmacology
4.
Leukemia ; 6(11): 1113-20, 1992 Nov.
Article in English | MEDLINE | ID: mdl-1279323

ABSTRACT

Exposure of human promyelocytic leukemic HL-60 cells to the topoisomerase I inhibitor camptothecin (CAM) triggers endonucleolytic activity and apoptotic death of these cells. The nucleolytic effect is seen 2-4 h after drug addition and is highly selective to cells progressing through S phase. Concomitant with degradation of DNA, which is preferential to the nucleosomal DNA linker sections, extensive proteolysis takes place in these cells. Cellular RNA, however, is initially degraded to a much lesser degree than DNA or protein. Both endonucleolysis and proteolysis triggered by CAM in S-phase HL-60 cells can be prevented by the protease inhibitors N-tosyl-L-phenylalanylchloromethyl ketone (TPCK), N-tosyl-L-lysylchloromethyl ketone (TLCK) or partly by N-tosyl-L-arginine methyl ester (TAME), added simultaneously with CAM, or up to 30 min after exposure to CAM, at their respective concentrations known to inhibit proteases. The protective effect of these protease inhibitors on DNA degradation cannot be due to the suppression of cell progression through S phase because cells still replicate DNA in their presence, albeit at a reduced rate. Furthermore, TPCK and TLCK protect rat thymocytes against endonucleolysis induced by prednisolone. In the latter cell system, (considered a classic model of apoptosis), endonucleolysis, which primarily affects G0/G1 cells, is unrelated to cell progression through S phase. The present data suggest that the endonucleolysis and proteolysis which accompany apoptotic cell death are coupled, and the proteolytic step is needed for DNA degradation to occur.


Subject(s)
Apoptosis/drug effects , Camptothecin/pharmacology , Endonucleases/metabolism , Protease Inhibitors/pharmacology , Animals , DNA Damage/drug effects , Flow Cytometry , Humans , In Vitro Techniques , Prednisolone/pharmacology , Proteins/metabolism , RNA/metabolism , Rats , S Phase , Thymus Gland/cytology , Tumor Cells, Cultured
5.
Cancer Res ; 52(6): 1530-5, 1992 Mar 15.
Article in English | MEDLINE | ID: mdl-1540962

ABSTRACT

Exposure of exponentially growing human promyelocytic of lymphocytic leukemic cells to the putative DNA topoisomerase II inhibitor fostriecin (FST), at a concentration of 1 microM, results in the suppression of their rate of progression through the S and G2 phases of the cell cycle. At concentrations between 5 microM and 0.5 mM, FST triggers endonucleolytic DNA degradation in human promyelocytic leukemia cells, resulting in apoptotic cell death; this effect is not selective for any particular phase of the cell cycle. Little or no apoptotic cell death is observed in lymphocytic leukemic cells at any FST concentration. Because FST, unlike other inhibitors of topoisomerase II, such as teniposide (TN) or amsacrine (m-AMSA), does not stabilize cleavable DNA-topoisomerase complexes, the observed differences between the effects of FST versus TN or m-AMSA on the cell cycle may provide clues regarding the role of such complexes in the kinetic effects of these inhibitors. The present results, therefore, are compared with our earlier data on the effects of TN and m-AMSA on the same cells. The only observed difference is the loss of cell cycle phase-specific triggering of DNA degradation by FST in human promyelocytic leukemia cells, compared to the S phase-specific effects of TN and m-AMSA. Therefore, stabilization of the DNA-topoisomerase cleavable complexes may be essential in the selectivity of cell kill during S phase. However, it appears that the presence of stabilized complexes is not essential to the suppression of cell progression through S or G2 or the induction of apoptotis or necrosis, in general, by topoisomerase II inhibitors.


Subject(s)
Antibiotics, Antineoplastic/pharmacology , DNA, Neoplasm/drug effects , Leukemia, Lymphoid/drug therapy , Leukemia, Promyelocytic, Acute/drug therapy , Alkenes/pharmacology , Amsacrine/pharmacology , Cell Cycle/drug effects , Humans , Leukemia, Lymphoid/pathology , Leukemia, Promyelocytic, Acute/pathology , Polyenes , Pyrones , Teniposide/pharmacology , Tumor Cells, Cultured
6.
Cytometry ; 13(8): 795-808, 1992.
Article in English | MEDLINE | ID: mdl-1333943

ABSTRACT

The present review describes several methods to characterize and differentiate between two different mechanisms of cell death, apoptosis and necrosis. Most of these methods were applied to studies of apoptosis triggered in the human leukemic HL-60 cell line by DNA topoisomerase I or II inhibitors, and in rat thymocytes by either topoisomerase inhibitors or prednisolone. In most cases, apoptosis was selective to cells in a particular phase of the cell cycle: only S-phase HL-60 cells and G0 thymocytes were mainly affected. Necrosis was induced by excessively high concentrations of these drugs. The following cell features were found useful to characterize the mode of cell death: a) Activation of an endonuclease in apoptocic cells resulted in extraction of the low molecular weight DNA following cell permeabilization, which, in turn, led to their decreased stainability with DNA-specific fluorochromes. Measurements of DNA content made it possible to identify apoptotic cells and to recognize the cell cycle phase specificity of the apoptotic process. b) Plasma membrane integrity, which is lost in necrotic but not apoptotic cells, was probed by the exclusion of propidium iodide (PI). The combination of PI followed by Hoechst 33342 proved to be an excellent probe to distinguish live, necrotic, early- and late-apoptotic cells. c) Mitochondrial transmembrane potential, assayed by retention of rhodamine 123 was preserved in apoptotic but not necrotic cells. d) The ATP-dependent lysosomal proton pump, tested by the supravital uptake of acridine orange (AO) was also preserved in apoptotic but not necrotic cells. e) Bivariate analysis of cells stained for DNA and protein revealed markedly diminished protein content in apoptotic cells, most likely due to activation of endogenous proteases. Necrotic cells, having leaky membranes, had minimal protein content. f) Staining of RNA allowed for the discrimination of G0 from G1 cells and thus made it possible to reveal that apoptosis was selective to G0 thymocytes. g) The decrease in forward light scatter, paralleled either by no change (HL-60 cells) or an increase (thymocytes) of right angle scatter, were early changes during apoptosis. h) The sensitivity of DNA in situ to denaturation, was increased in apoptotic and necrotic cells. This feature, probed by staining with AO at low pH, provided a sensitive and early assay to discriminate between live, apoptotic and necrotic cells, and to evaluate the cell cycle phase specificity of these processes. i) The in situ nick translation assay employing labeled triphosphonucleotides can be used to reveal DNA strand breaks, to detect the very early stages of apoptosis.(ABSTRACT TRUNCATED AT 400 WORDS)


Subject(s)
Apoptosis , DNA/analysis , Flow Cytometry , Animals , Antineoplastic Agents/pharmacology , Apoptosis/drug effects , Cell Cycle , Cell Death , Cell Membrane/drug effects , Cell Membrane/ultrastructure , Cell Size/drug effects , DNA Damage , Endodeoxyribonucleases/metabolism , Endopeptidases/metabolism , Enzyme Activation , Fluorescent Dyes , Humans , Leukemia, Promyelocytic, Acute/pathology , Membrane Potentials , Nucleic Acid Denaturation , Organelles/ultrastructure , Proteins/analysis , Rats , Thymus Gland/cytology , Thymus Gland/drug effects , Topoisomerase I Inhibitors , Topoisomerase II Inhibitors , Tumor Cells, Cultured/drug effects
7.
Oncol Res ; 4(1): 29-35, 1992.
Article in English | MEDLINE | ID: mdl-1374671

ABSTRACT

Rat thymocytes were treated in culture with prednisolone or the DNA topoisomerase I or II inhibitors, camptothecin (CAM) or teniposide (TN), and proportions of cells in different phases of the cell cycle were estimated by flow cytometry using a staining methodology which makes it possible to discriminate between G0 and G1 cells, as well as to recognize the cells which undergo apoptosis. The appearance of apoptotic cells in cultures treated with pharmacological concentrations of these drugs, observed as early as 3-6 hr after treatment, coincided with the selective loss of G0 cells in these cultures, while no significant changes in the proportion of S or G2+M cells were apparent. Agarose gel electrophoresis of DNA isolated from the treated cells indicated degradation of the internucleosomal spacer sections, typical of the endonucleolytic activity which accompanies apoptotic cell death. The data indicate that G0 thymocytes were particularly sensitive to agents that induce apoptosis while cells progressing through the cell cycle were resistant. This suggests that under in vivo conditions (immunological response), the selective death of G0 cells may promote the clonal expansion of stimulated thymocytes which enter the cell cycle. Together with our earlier studies on the effects of CAM and TN on MOLT-4 and HL-60 leukemic cell lines, these data indicate that both, phenotypic- and and cell cycle phase specific- factors modify the ability of cells to respond to toxic agents, including chemotherapeutics by apoptosis.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
Camptothecin/toxicity , Cell Cycle , Cell Death/drug effects , Prednisolone/toxicity , Protease Inhibitors/pharmacology , Teniposide/toxicity , Thymus Gland/cytology , Animals , DNA/chemistry , Flow Cytometry , In Vitro Techniques , RNA/chemistry , Rats , Topoisomerase I Inhibitors
8.
Clin Exp Immunol ; 84(3): 406-10, 1991 Jun.
Article in English | MEDLINE | ID: mdl-1904326

ABSTRACT

Swainsonine, an inhibitor of mannosidase II, involved in N-linked glycoprotein processing, modifies expression of cell surface receptors. This alkaloid has strong anti-metastatic and immunomodulatory activity; it enhances stimulation of lymphocytes triggered by concanavalin A (ConA) but suppresses stimulatory effects of phytohaemagglutinin (PHA). We presently observe that swainsonine decreases expression of the interleukin-2 (IL-2) receptor (IL-2R) on PHA-stimulated human peripheral blood lymphocytes, measured by binding of a monoclonal antibody that recognizes the 55-kD glycoprotein subunit (alpha) of this receptor. Proliferation of the PHA-stimulated lymphocytes is suppressed by swainsonine, which manifests in the decreased proportion of both cells entering G1 (from G0) and those progressing through S. G2 and M. This suppression can be overcome by addition of IL-2 into cultures. In contrast, swainsonine has no effect on IL-2R expression and stimulation (cell cycle progression) of lymphocytes triggered by the monoclonal antibody OKT3. The data suggest a possibility that the observed swainsonine effects on lymphocytes stimulated by PHA are mediated via surface receptors other than IL-2R. These receptors may appear prior to IL-2R and be also involved in cell stimulation by PHA but not by other mitogens.


Subject(s)
Alkaloids/pharmacology , Lymphocyte Activation/drug effects , Mannosidases/antagonists & inhibitors , Receptors, Interleukin-2/analysis , Humans , Lymphocytes/drug effects , Lymphocytes/immunology , Phytohemagglutinins/pharmacology , Swainsonine
9.
Exp Cell Res ; 193(1): 27-35, 1991 Mar.
Article in English | MEDLINE | ID: mdl-1995300

ABSTRACT

The DNA topoisomerase I inhibitor camptothecin (CAM) is selectively cytotoxic to S-phase cells of HL-60, and some other myelogenous leukemic lines. The early effects of cell exposure to 0.05-0.2 micrograms/ml CAM are seen after 2 h; at that time a progressive degradation of DNA in the chromatin of S-phase cells is initiated. The degradation manifests by "pulverization" of chromatin followed by coalescence of the fine granules and nuclear disintegration. Between 2 and 6 h of treatment, a loss of about 30-70% of DNA from S-phase nuclei is detected by flow cytometry. A 10-min pulse of CAM is adequate to trigger subsequent DNA degradation. Agarose gel electrophoresis of DNA from CAM-treated cells reveals a typical nucleosome core particles "ladder," suggestive of preferential degradation of spacer DNA. Despite extensive loss of DNA and nuclear disintegration, the cell membrane of CAM-treated S-phase cells remains intact for several hours, excluding trypan blue or propidium iodide. Mitochondria, assayed for their ability to maintain a transmembrane potential (rhodamine 123 retention), as well as the lysosomal proton pump (probed by supravital uptake of acridine orange) also remain unchanged in these cells. G1 cells are refractory to CAM under these conditions. Synchronization of cells in S phase by aphidicolin increases the sensitivity of the whole cell population to CAM. The data suggest that CAM or other topoisomerase I inhibitors may be effective in some myelogenous leukemias, especially in combination with treatments synchronizing cells in S phase.


Subject(s)
Camptothecin/toxicity , Tumor Cells, Cultured/drug effects , Cell Cycle/drug effects , Cell Nucleus/drug effects , DNA, Neoplasm/analysis , Electrophoresis, Agar Gel , Flow Cytometry , Fluorescent Dyes , Humans , Indoles , Leukemia, Myeloid , Lysosomes/drug effects , Mitochondria/drug effects , S Phase/drug effects , Time Factors , Tumor Cells, Cultured/cytology
10.
Biochem Pharmacol ; 41(6-7): 1055-65, 1991.
Article in English | MEDLINE | ID: mdl-2009074

ABSTRACT

The binding sites for mitoxantrone (MIT), Ametantrone (AMT), doxorubicin (DOX), actinomycin D (AMD) and ethidium bromide (EB) in nuclei from exponentially growing and differentiating human promyelocytic HL-60 and lymphocytic leukemic MOLT-4 cells were studied by gel electrophoresis of proteins selectively released during titration of these nuclei with the drugs. Each drug at different drug: DNA binding ratios resulted in a characteristic pattern of protein elution and/or retention. For example, in nuclei from exponentially growing HL-60 cells, MIT affected 44 nuclear proteins that were different from those affected by EB; of these 29 were progressively released at increasing MIT:DNA ratios, 11 were transiently released (i.e. only at a low MIT:DNA ratio) and 4 entrapped. Patterns of proteins displaced from nuclei of exponentially growing HL-60 cells differed from those of cells undergoing myeloid differentiation as well as from those of exponentially growing MOLT-4 cells. The first effects were seen at a binding density of approximately one drug molecule per 10-50 base pairs of DNA. The observed selective displacement of proteins may reflect drug-altered affinity of the binding sites for those proteins, for example due to a change of nucleic acid or protein conformation upon binding the ligand. The data show that the binding site(s) for each of the ligands studied is different and the differences correlate with variability in chemical structure between the ligands. The nature of the drug-affected proteins may provide clues regarding antitumor or cytotoxic mechanisms of drug action.


Subject(s)
Antineoplastic Agents/pharmacology , Cell Nucleus/drug effects , Nuclear Proteins/metabolism , Nucleic Acids/metabolism , Antineoplastic Agents/metabolism , Binding Sites , Cell Line/drug effects , Cell Nucleus/metabolism , Dactinomycin/pharmacology , Doxorubicin/pharmacology , Ethidium/pharmacology , Humans , Mitoxantrone/analogs & derivatives , Mitoxantrone/pharmacology , Protein Conformation
11.
J Biol Chem ; 265(5): 2804-13, 1990 Feb 15.
Article in English | MEDLINE | ID: mdl-2137450

ABSTRACT

The first ATP-dependent complex formed in pre-mRNA splicing is the prespliceosome, a 30 S complex. This reaction was investigated using partially purified fractions isolated from nuclear extracts of HeLa cells. Previous studies (Furneaux, H. M., Perkins, K. K., Freyer, G. A., Arenas, J., and Hurwitz, J. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 4351-4355) have shown that DEAE-cellulose chromatography of nuclear extracts yielded two fractions (fractions I and II, eluted at 0.2 and 1 M NaCl, respectively) which carried out pre-mRNA splicing only when combined. Fraction II, alone and in the presence of ATP, supported the formation of the 30 S complex. In this report, we have separated fraction II into ribonucleoprotein and protein-rich fractions by isopycnic banding in CsCl. The combination of these two fractions completely replaced fraction II in prespliceosome formation; when supplemented with fraction Ib (1 M NaCl Biorex fraction derived from fraction I), the preparations supported spliceosome formation; when supplemented with fraction I, they yielded spliced products. The CsCl fractions, like fraction II, efficiently converted pre-mRNA to the 30 S complex with high yields (30-70%). The 30 S complex was shown to contain pre-mRNA complexed to U2 small ribonucleoproteins and small amounts of U1 small ribonucleoproteins. The 30 S complex protected a 50-nucleotide region at the 3'-end of the intron from T1 RNase attack. This region included sequences spanning the branch site, the polypyrimidine stretch and the AG dinucleotide of the 3'-splice site. When the 30 S complex was first generated with partially purified fractions, followed by the addition of a large amount of poly(U) or unlabeled pre-mRNA, the 30 S complex could be chased into a 55 S spliceosome complex by the addition of fraction Ib. These results support the conclusion, initially derived from kinetic data, that the 30 S complex is a precursor of the 55 S complex.


Subject(s)
Cell Nucleus/metabolism , RNA Precursors/genetics , RNA Splicing , Base Sequence , Biotin , Centrifugation, Density Gradient , Chromatography, DEAE-Cellulose , Ethylmaleimide/pharmacology , HeLa Cells/metabolism , Humans , Kinetics , Molecular Sequence Data , Plasmids , RNA Precursors/isolation & purification , Ribonucleoproteins/isolation & purification , Ribonucleoproteins, Small Nuclear , Subcellular Fractions/metabolism
12.
Z Naturforsch C J Biosci ; 43(3-4): 231-42, 1988.
Article in English | MEDLINE | ID: mdl-3388956

ABSTRACT

Chemical and enzymatic procedures have been employed for the preparation of various phosphorylated derivatives of the acyclonucleoside 9-(1,3-dihydroxy-2-propoxymethyl)adenine, an analogue of the active antiviral agent 9-(1,3-dihydroxy-2-propoxymethyl)guanine (DHPG). In combination with the previously reported 2',3'-seco nucleosides and their phosphates and cyclic phosphates (Stolarski et al., Z. Naturforsch. 41c, 758-770, 1986), this made available a broad class of acyclonucleosides and nucleotides, the acyclic moieties of which are capable of mimicking the ribose and 2'-deoxyribose rings. The solution conformations of the foregoing were determined with the aid of 1H, 13C and 31P NMR, and compared with those of DHPG and 9-(hydroxyethoxymethyl)guanine (Acyclovir, ACV). Particular attention was devoted to conformations about C-O bonds in different acyclic fragments, which demonstrated well-defined differences between 2',3'-seco derivatives on the one hand (conformational "rigidity") and derivatives with DHP and AC acyclic chains on the other (rotation about the C(1')-O(4') bond). The overall results are in good general agreement with reported crystal structures, and are compared with those obtained by quantum mechanical calculations. The conformational features of the various compounds are also discussed in relation to their substrate and/or inhibitor properties in a number of enzyme systems, including adenosine deaminase, phosphodiesterases, nuclease P1,3'-nucleotidase and herpes virus type 1 thymidine kinase.


Subject(s)
Antiviral Agents , Enzyme Inhibitors , Nucleosides , Nucleotides , Antiviral Agents/pharmacology , Hydrolysis , Magnetic Resonance Spectroscopy , Molecular Conformation , Nucleosides/pharmacology , Nucleotides/pharmacology , Solutions , Substrate Specificity
13.
Biochemistry ; 26(14): 4372-80, 1987 Jul 14.
Article in English | MEDLINE | ID: mdl-2822090

ABSTRACT

New analogues of 7-methylguanosine 5'-monophosphate (m7GMP) were synthesized with modified 5'-phosphate moieties by replacement of -O with -H, -CH3, or -NH2. Additional analogues were synthesized with 8-methyl- or 8-aminoguanine base substitutions or ring-opened ribose (2',3'-diol). These compounds were analyzed by 1H and 31P NMR for solution conformation. In addition, they were also analyzed for biological activity as analogues of mRNA 5'-caps by competition as inhibitors of translation in reticulocyte lysate. Substitution of oxygen on the 5'-monophosphate moiety by -H and -CH3 diminished the activity of the cap analogue as a competitive inhibitor; however, replacement by -NH2 did not diminish the activity of the analogue as an inhibitor. It was inferred from this result that cap binding proteins require a hydrogen bond acceptor as opposed to having an exclusive requirement for a second anionic group on the alpha-phosphate moiety. Inhibition results obtained with C8-substituted m7GMP analogues indicated that the 8-amino derivative was a better inhibitor than the 8-methyl derivative of m7GMP. The former is primarily anti whereas the latter is primarily syn with respect to glycosidic bond conformation. This result further supports the model that the anti conformation is the preferred form of the cap structure for interaction with cap binding proteins. The 2',3'-diol derivative of m7GMP was inactive as an inhibitor of translation.


Subject(s)
Guanine Nucleotides , Guanosine Monophosphate/analogs & derivatives , Protein Biosynthesis/drug effects , RNA Cap Analogs/chemical synthesis , RNA Caps/chemical synthesis , Animals , Globins/genetics , Guanosine Monophosphate/chemical synthesis , Guanosine Monophosphate/pharmacology , Indicators and Reagents , Magnetic Resonance Spectroscopy , Nucleic Acid Conformation , RNA Cap Analogs/pharmacology , RNA, Messenger/genetics , Rabbits , Reticulocytes/metabolism , Structure-Activity Relationship
14.
Z Naturforsch C J Biosci ; 42(5): 589-98, 1987 May.
Article in English | MEDLINE | ID: mdl-3037811

ABSTRACT

Conversion of uridine and cytidine to their 5'-O-tosyl derivatives, followed by cyanation with tetraethylammonium cyanide, reduction and deamination, led to isolation of the hitherto unknown homouridine (1-(5'-deoxy-beta-D-allofuranosyl)uracil) and homocytidine (1-(5'-deoxy-beta-D-allofuranosyl)cytosine), analogues of uridine and cytidine in which the exocyclic 5'-CH2OH chain is extended by one carbon to CH2CH2OH. Homocytidine was also phosphorylated to its 6'-phosphate and 6'-pyrophosphate analogues. In addition, it was converted, via its 2,2'-anhydro derivative, to arahomocytidine, an analogue of the chemotherapeutically active araC. The structures of all the foregoing were established by various criteria, including 1H and 13C NMR spectroscopy, both of which were also applied to analyses of the solution conformations of the various compounds, particularly as regards the conformations of the exocyclic chains. The behaviour of the homo analogues was examined in several enzymatic systems. Homocytidine was a feeble substrate, without inhibitory properties, of E. coli cytidine deaminase. Homocytidine was an excellent substrate for wheat shoot nucleoside phosphotransferase; while homouridine was a good substrate for E. coli uridine phosphorylase. Although homoCMP was neither a substrate, nor an inhibitor, of snake venom 5'-nucleotidase, homoCDP was a potent inhibitor of this enzyme (Ki approximately 6 microM). HomoCDP was not a substrate for M. luteus polynucleotide phosphorylase. None of the compounds exhibited significant activity vs herpes simplex virus type 1, or cytotoxic activity in several mammalian cell lines.


Subject(s)
Pyrimidine Nucleosides/chemical synthesis , 5'-Nucleotidase , Cytidine Deaminase/metabolism , Escherichia coli/enzymology , Indicators and Reagents , Kinetics , Micrococcus/enzymology , Molecular Conformation , Nucleotidases/metabolism , Pentosyltransferases/metabolism , Polyribonucleotide Nucleotidyltransferase/metabolism , Pyrimidine Nucleosides/metabolism , Pyrimidine Nucleosides/pharmacology , Structure-Activity Relationship , Substrate Specificity , Uridine Phosphorylase/metabolism
15.
Biochem Biophys Res Commun ; 137(1): 453-60, 1986 May 29.
Article in English | MEDLINE | ID: mdl-3718515

ABSTRACT

Cyclization of 2',3'-seco-5'- CMP and UMP with dicyclohexylcarbodiimide leads to 2',3'-seco-3':5'- cCMP and cUMP, formal structural analogues of 3':5'- cCMP and cUMP. POCl3 phosphorylation of 2',3'-secocytidine gave the same product in 50% yield, plus three additional seco nucleotides, one of which was independently obtained by enzymatic phosphorylation with the wheat shoot phosphotransferase system. The behaviour of these nucleotides has been examined in several enzyme systems. In particular, the seco 3':5'- cyclic phosphates are resistant to beef heart cyclic nucleotide phosphodiesterase, but are slowly hydrolyzed to the monophosphates by higher plant cyclic nucleotide phosphodiesterase.


Subject(s)
Nucleotides, Cyclic , Pyrimidine Nucleotides , Ribonucleotides/metabolism , Animals , Calmodulin/metabolism , Cattle , Chemical Phenomena , Chemistry , Cytidine Deaminase/metabolism , Myocardium/enzymology , Nucleic Acid Conformation , Nucleotides, Cyclic/metabolism , Phosphorylation , Pyrimidine Nucleotides/metabolism
16.
Z Naturforsch C Biosci ; 40(9-10): 710-4, 1985.
Article in English | MEDLINE | ID: mdl-3002059

ABSTRACT

Under conditions where 2'-deoxycoformycin is enzymatically phosphorylated by wheat shoot phosphotransferase to the 5'-phosphate in 15-20% yield, coformycin is a relatively poor substrate, and is phosphorylated only to the extent of less than or equal to 5%. However, chemical phosphorylation of coformycin by modifications of the Yoshikawa procedure led to isolation of coformycin-5'-phosphate in 20% overall yield. Coformycin-5'-phosphate was characterized by various criteria, including 1H NMR spectroscopy. Comparison of the spectrum with that of the parent nucleoside indicated that the nucleotide is predominantly, although not exclusively, in the conformation anti about the glycosidic bond. Like 2'-deoxycoformycin-5'-phosphate, coformycin-5'-phosphate was a feeble substrate of snake venom 5'-nucleotidase, and is hydrolyzed, quantitatively, at only 2% the rate for 5'-AMP. With 5'-AMP analogues as substrate, the 5'-phosphates of both coformycin and deoxycoformycin were poor inhibitors of the enzyme, with Ki values greater than 0.3 mM. The 5'-phosphates of both coformycin and deoxycoformycin do not significantly inhibit adenosine deaminase (Ki greater than 0.2 mM), but are potent inhibitors of adenylate deaminase (Ki less than or equal to 10(-9) M). Neither coformycin nor deoxycoformycin are inhibitors of mammalian purine nucleoside phosphorylase. The stabilities of coformycin, deoxycoformycin, and their 5'-phosphates, have been examined as a function of pH, and nature of the buffer medium. In particular, all exhibit instability in acid and neutral media, but are relatively stable in the vicinity of pH 9. Some biological aspects of the overall results are presented.


Subject(s)
Coformycin/metabolism , Nucleosides/metabolism , Nucleotides/metabolism , Ribonucleosides/metabolism , 5'-Nucleotidase , AMP Deaminase/metabolism , Adenosine Deaminase/metabolism , Chromatography, Thin Layer , Coformycin/analogs & derivatives , Magnetic Resonance Spectroscopy , Nucleotidases/analysis , Pentostatin , Phosphorylation , Purine-Nucleoside Phosphorylase/analysis , Snake Venoms/analysis , Spectrophotometry, Ultraviolet
17.
Biochemistry ; 23(21): 5048-53, 1984 Oct 09.
Article in English | MEDLINE | ID: mdl-6498175

ABSTRACT

The three-dimensional structure of 8-chloroguanosine dihydrate was determined by X-ray crystallography. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), and the cell dimensions are a = 4.871 (1) A, b = 12.040 (1) A, and c = 24.506 (1) A. The structure was determined by direct methods, and least-squares refinement, which included all hydrogen atoms, converged at R = 0.031 for 1599 observed reflections. The conformation about the glycosidic bond is syn with chi CN = -131.1 degrees. The ribose ring has a C(2')-endo/C-(1')-exo (2T1) pucker, and the gauche+ conformation of the -CH2OH side chain is stabilized by an intramolecular O-(5')-H...N(3) hydrogen bond. Conformational analysis by means of 1H NMR spectroscopy showed that, in dimethyl sulfoxide, the sugar ring exhibits a marked preference for the C(2')-endo conformation (approximately 70%) and a conformation about the glycosidic bond predominantly syn (approximately 90%), hence similar to that in the solid state. However, the conformation of the exocyclic 5'-CH2OH group exhibits only a moderate preference for the gauche+ rotamer (approximately 40%), presumably due to the inability to form the intramolecular hydrogen bond to N(3) in a polar medium. The conformational features are examined in relation to the behavior of 8-substituted purine nucleosides in several enzymatic systems, with due account taken of the steric bulk and electronegativities of the 8-substituents.


Subject(s)
Guanosine/analogs & derivatives , Guanosine/pharmacology , Hydrogen Bonding , Lactobacillus/enzymology , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Conformation , Pentosyltransferases/metabolism , Purines , Structure-Activity Relationship , X-Ray Diffraction
18.
Z Naturforsch C Biosci ; 39(1-2): 55-63, 1984.
Article in English | MEDLINE | ID: mdl-6326408

ABSTRACT

Susceptibilities to snake venom 5'-nucleotidase (EC 3.1.3.5) have been evaluated for several 8-substituted analogues of 5'-GMP with varying populations of syn/anti conformations about the glycosidic bond. Improved syntheses of some of these are described, including direct chlorination of 5'-GMP to give 8-chloro-5'-GMP, a procedure which should be applicable to other purine nucleotides. The conformations of the various analogues were determined by means of 1H NMR spectroscopy, with particular emphasis on the glycosidic bond conformations. All the 8-substituted derivatives of 5'-GMP were relatively poor substrates of 5'-nucleotidase. This was shown to result largely from steric effects and the nature of the 8-substituent, and consistent with a requirement for the anti conformation. Although ribose-5-phosphate was not a substrate, it was a weak inhibitor, and its inhibitory properties account in part for the weak inhibitory properties of the 8-substituted 5'-GMP, and other, analogues. Attention is drawn to the hitherto largely neglected differences in properties of 5'-nucleotidases from different sources and their relevance to the present findings.


Subject(s)
Guanine Nucleotides , Guanosine Monophosphate , Nucleotidases/metabolism , 5'-Nucleotidase , Chromatography, Thin Layer , Guanine Nucleotides/metabolism , Guanosine Monophosphate/analogs & derivatives , Guanosine Monophosphate/metabolism , Magnetic Resonance Spectroscopy , Molecular Conformation , Snake Venoms , Spectrophotometry, Ultraviolet
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