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1.
Annu Rev Biochem ; 74: 385-410, 2005.
Article in English | MEDLINE | ID: mdl-15952892

ABSTRACT

Immune modulators such as cytokines and growth factors exert their biological activity through high-affinity interactions with cell-surface receptors, thereby activating specific signaling pathways. However, many of these molecules also participate in low-affinity interactions with another class of molecules, referred to as proteoglycans. Proteoglycans consist of a protein core to which glycosaminoglycan (GAG) chains are attached. The GAGs are long, linear, sulfated, and highly charged heterogeneous polysaccharides that are expressed throughout the body in different forms, depending on the developmental or pathological state of the organ/organism. They participate in many biological functions, including organogenesis and growth control, cell adhesion, signaling, inflammation, tumorigenesis, and interactions with pathogens. Recently, it was demonstrated that certain chemokines require interactions with GAGs for their in vivo function. The GAG interaction is thought to provide a mechanism for retaining chemokines on cell surfaces, facilitating the formation of chemokine gradients. These gradients serve as directional cues to guide the migration of the appropriate cells in the context of their inflammatory, developmental, and homeostatic functions. In this review, we discuss GAGs and their interaction with proteins, with a special emphasis on the chemokine system.


Subject(s)
Chemokines/metabolism , Glycosaminoglycans/metabolism , Proteins/metabolism , Animals , Carbohydrate Sequence , Chemokines/chemistry , Chemokines/genetics , Glycosaminoglycans/chemistry , Glycosaminoglycans/genetics , Humans , In Vitro Techniques , Macromolecular Substances , Models, Molecular , Molecular Sequence Data , Molecular Structure , Proteins/chemistry , Proteins/genetics , Proteoglycans/chemistry , Proteoglycans/genetics , Proteoglycans/metabolism
3.
Proc Natl Acad Sci U S A ; 98(16): 9008-13, 2001 Jul 31.
Article in English | MEDLINE | ID: mdl-11470923

ABSTRACT

Poxviruses express a family of secreted proteins that bind with high affinity to chemokines and antagonize the interaction with their cognate G protein-coupled receptors (GPCRs). These viral inhibitors are novel in structure and, unlike cellular chemokine receptors, are able to specifically interact with most, if not all, CC-chemokines. We therefore sought to define the structural features of CC-chemokines that facilitate this broad-spectrum interaction. Here, we identify the residues present on human monocyte chemoattractant protein-1 (MCP-1) that are required for high-affinity interaction with the vaccinia virus 35-kDa CC-chemokine binding protein (VV-35kDa). Not only do these residues correspond to those required for interaction with the cognate receptor CCR2b but they are also conserved among many CC-chemokines. Thus, the results provide a structural basis for the ability of VV-35kDa to promiscuously recognize CC-chemokines and block binding to their receptors.


Subject(s)
Chemokine CCL2/antagonists & inhibitors , Poxviridae/chemistry , Viral Proteins/pharmacology , Amino Acid Sequence , Chemokine CCL2/chemistry , Humans , Models, Molecular , Molecular Sequence Data , Protein Conformation , Sequence Homology, Amino Acid , Surface Plasmon Resonance , Virulence Factors
4.
Hum Genet ; 104(4): 293-300, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10369158

ABSTRACT

Gaucher disease, an inherited glycolipid storage disorder, is caused by a deficiency of the catabolic enzyme glucocerebrosidase (EC 3.2.1.45). The gene for human glucocerebrosidase is located on chromosome 1q21 and has a highly homologous pseudogene situated 16 kb downstream. We report two novel polymorphic sequences in the glucocerebrosidase gene region: the first consists of a variable number of dinucleotide (CT) repeats located 3.2 kb upstream from the glucocerebrosidase gene, and the second is a tetranucleotide (AAAT) repeat found between the glucocerebrosidase gene and its pseudogene, 9.8 kb downstream from the functional gene. These polymorphic sequences, along with a previously reported PvuII polymorphism in intron 6 of the glucocerebrosidase gene, were analyzed in patients with Gaucher disease (n=106) and in two normal control populations, one of Ashkenazi Jewish ancestry (n=72) and the second comprising non-Jewish individuals (n=46). In these samples, strong linkage disequilibrium was found between mutations N370S, c.84-85insG, and R463C and specific haplotypes; no significant linkage disequilibrium was found when examining haplotypes of patients with the L444P mutation. Studies of these polymorphic sites in several instances also led to the recognition of genotyping errors and the identification of unusual recombinant alleles. These new polymorphic sites provide additional tools for mutational screening and founder effect studies of Gaucher disease.


Subject(s)
Founder Effect , Gaucher Disease/genetics , Glucosylceramidase/genetics , Polymorphism, Restriction Fragment Length , Amino Acid Substitution , Cell Line , Chromosome Mapping , Chromosomes, Human, Pair 1 , DNA/blood , DNA/genetics , DNA Mutational Analysis , Deoxyribonucleases, Type II Site-Specific , Dinucleotide Repeats , Gaucher Disease/enzymology , Humans , Jews/genetics , Linkage Disequilibrium , Point Mutation , Pseudogenes
5.
Pediatr Res ; 43(5): 571-8, 1998 May.
Article in English | MEDLINE | ID: mdl-9585001

ABSTRACT

Gaucher's disease, the inherited deficiency of glucocerebrosidase, manifests with vast phenotypic variation. Even among patients with type 2 (acute neuronopathic) Gaucher's disease, there is a spectrum of clinical presentations. DNA samples from 14 patients with type 2 Gaucher's disease with a course ranging from intrauterine death at 22 wk of gestation to survival until age 30 mo were studied. L444P was the only common mutation identified, found in 15 patients' alleles. Sequencing of genomic DNA amplified by long template PCR revealed that mutation L444P occurred as a single point mutation in seven mutant alleles and as part of a recombinant allele in eight mutant alleles. Two patients had a deletion of 55 bp in exon 9; in one patient the deletion was part of a recombinant allele, and in a second the deletion occurred alone. Direct sequencing identified R120W on one allele, P415R on another, and one fetus was homoallelic for a deletion of a C nucleotide at codon 139 in exon 5. Eight of the mutant alleles remain unidentified. Northern blots revealed an appropriately sized mRNA in all except one of the patients studied. Of the 14 type 2 Gaucher patients, three had hydrops fetalis and died in utero or at birth, five had congenital ichthyosis, and seven survived 5 mo or more. Patients who died in the neonatal period had decreased protein detected by Western blot, regardless of genotype observed. These studies demonstrate that genotypic heterogeneity exists in patients with type 2 Gaucher's disease, even among infants with the most severe phenotypes.


Subject(s)
Gaucher Disease/genetics , Genetic Variation , Glucosylceramidase/genetics , Point Mutation , Sequence Deletion , Abortion, Spontaneous/genetics , Alleles , Child, Preschool , Female , Fetal Death , Gaucher Disease/classification , Gaucher Disease/enzymology , Genotype , Humans , Infant , Infant, Newborn , Male , Phenotype , Polymerase Chain Reaction , Pregnancy , Recombination, Genetic
6.
Am J Med Genet ; 73(1): 41-7, 1997 Nov 28.
Article in English | MEDLINE | ID: mdl-9375921

ABSTRACT

The complete spectrum of clinical phenotypes resulting from glucocerebrosidase deficiency continues to evolve. While most patients with Gaucher disease have residual glucocerebrosidase activity, we describe a fetus with severe prenatal lethal type 2 (acute neuronopathic) Gaucher disease lacking glucocerebrosidase activity. This 22-week fetus was the result of a first cousin marriage and had hydrops, external abnormalities, hepatosplenomegaly, and Gaucher cells in several organs. Fetal fibroblast DNA was screened for common Gaucher mutations, none of which was detected. Southern blot analysis using the restriction enzymes SstII and SspI ruled out a fusion gene, deletion, or duplication of either allele, and quantitative studies of SspI digested genomic DNA indicated that both alleles were present. Northern blot analysis of total RNA from fetal fibroblasts demonstrated no detectable transcription, although RT-PCR successfully amplified several exons, suggesting the presence of a very unstable mRNA. Direct PCR sequencing of all exons demonstrated a homozygous frameshift mutation (deletion of a C) on codon 139 in exon 5, thereby introducing a premature termination codon in exon 6. The absence of glucocerebrosidase protein was confirmed by Western analysis. This unique case confirms the essential role of glucocerebrosidase in human development and, like the null allele Gaucher mouse, demonstrates the lethality of a homozygous null mutation. The presence of this novel mutation and the resulting unstable mRNA accounts for the severity of the phenotype observed in this fetus, and contributes to the understanding of genotype/phenotype correlation in Gaucher disease.


Subject(s)
Fetal Death , Gaucher Disease/enzymology , Gene Deletion , Glucosylceramidase/genetics , Homozygote , Blotting, Southern , Blotting, Western , Exons , Female , Frameshift Mutation , Gaucher Disease/embryology , Gaucher Disease/genetics , Gaucher Disease/mortality , Glucosylceramidase/metabolism , Humans , Male , Pedigree , Polymerase Chain Reaction , Pregnancy
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