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Nat Commun ; 9(1): 1139, 2018 03 19.
Article in English | MEDLINE | ID: mdl-29556010

ABSTRACT

Streptomycetes are notable for their complex life cycle and production of most clinically important antibiotics. A key factor that controls entry into development and the onset of antibiotic production is the 68-residue protein, BldC. BldC is a putative DNA-binding protein related to MerR regulators, but lacks coiled-coil dimerization and effector-binding domains characteristic of classical MerR proteins. Hence, the molecular function of the protein has been unclear. Here we show that BldC is indeed a DNA-binding protein and controls a regulon that includes other key developmental regulators. Intriguingly, BldC DNA-binding sites vary significantly in length. Our BldC-DNA structures explain this DNA-binding capability by revealing that BldC utilizes a DNA-binding mode distinct from MerR and other known regulators, involving asymmetric head-to-tail oligomerization on DNA direct repeats that results in dramatic DNA distortion. Notably, BldC-like proteins radiate throughout eubacteria, establishing BldC as the founding member of a new structural family of regulators.


Subject(s)
Bacterial Proteins/metabolism , DNA-Binding Proteins/metabolism , Streptomyces coelicolor/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Base Sequence , Binding Sites/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Developmental , Genes, Bacterial , Models, Molecular , Nucleic Acid Conformation , Promoter Regions, Genetic , Protein Structure, Quaternary , Regulon , Repetitive Sequences, Nucleic Acid , Repressor Proteins/genetics , Static Electricity , Streptomyces coelicolor/genetics , Streptomyces coelicolor/growth & development
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