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1.
J Phys Chem A ; 127(15): 3317-3329, 2023 Apr 20.
Article in English | MEDLINE | ID: mdl-37026406

ABSTRACT

Structural and dynamical properties of Sr2+ and Ba2+ dications in ammonia microsolvation environments were studied through hybrid density functional theory Born-Oppenhemier molecular dynamics of [Sr(NH3)n]2+ and [Ba(NH3)n]2+ clusters with n = 2, 3, 4, 5, 6, 8, 10, and 27. The largest cluster models were used to explore bulk phase solvation of Sr2+ and Ba2+ in liquid ammonia for which experimental data are available. Results are discussed in the light of previous results obtained for the [Mg(NH3)n]2+ and [Ca(NH3)n]2+ systems with the same methodology. Vibrational and EXAFS spectra are reported for the first time for [Sr(NH3)n]2+ and [Ba(NH3)n]2+ systems. It was found that alkaline earth dications have coordination numbers (CN) in ammonia as follows: Mg2+ (6) < Ca2+ (8) < Sr2+ (8.3) < Ba2+ (9.4). The coordination structures found turn out to be rather flexible with CN greater than six and these structures depart from the simple geometry of hexamine in the solid phase.

2.
J Phys Chem A ; 125(21): 4565-4577, 2021 Jun 03.
Article in English | MEDLINE | ID: mdl-34029097

ABSTRACT

We report the structural and energetic features of the Mg2+ and Ca2+ cations in ammonia microsolvation environments. Born-Oppenhemier molecular dynamics studies are carried out for [Mg(NH3)n]2+ and [Ca(NH3)n]2+ clusters with n = 2, 3, 4, 6, 8, 20, and 27 at 300 K based on hybrid density functional theory calculations. We determine binding energies per ammonia molecule and the metal cation solvation patterns as a function of the number of molecules. The general trend for Mg2+ is that the Mg-N distances increase as a function of n until the first solvation shell is populated by six ammonia molecules, and then the distances slightly decrease while CN = 6 does not change. For Ca2+, the first solvation shell at room temperature is populated by eight ammonia molecules for clusters with more than one solvation shell, leading to a different structure from that of [Ca(NH3)6]2+ hexamine. The evaporation of NH3 molecules was found at 300 K only for Mg2+ clusters with n ≥ 10; this was not the case for Ca2+ clusters. Vibrational spectra are obtained for all of the clusters, and the evolution of the main features is discussed. EXAFS spectra are also presented for the [Mg(NH3)27(NH3)27]2+ and [Ca(NH3)27]2+ clusters, which yield valuable data to be compared with experimental data in the liquid phase, as previously done for the aqueous solvation of these dications.

3.
J Phys Chem B ; 123(43): 9155-9166, 2019 10 31.
Article in English | MEDLINE | ID: mdl-31584817

ABSTRACT

The Pb2+ presents unique hydration features that make the experimental characterization and its theoretical modeling challenging: classical molecular dynamics (MD) with standard force-fields fails to produce the experimentally determined diffusion coefficient and the EXAFS spectrum. Here we study the hydration of Pb2+ in aqueous solution employing a polarizable model compatible with the MCDHO water model. The MCDHO FF for the Pb2+-water interaction was fitted to reproduce the configurations and interaction energies of various [Pb(H2O)n]2+ clusters obtained with ab initio calculations, with n = 4, 6, and 8. Its use in classical MD simulations yielded qualitative agreement with Born-Oppenheimer molecular dynamics of gas-phase hydrated clusters and MD simulations of the aqueous solution resulted in good agreement with the experimental DPb2+ and EXAFS spectrum. Analysis of the MD trajectories revealed a labile and very dynamic hemidirected first hydration shell in the aqueous solution with a non-well-defined coordination number CN; nonetheless, it was found that the more probable hydration structures have either 3 or 4 water molecules directly bound to the Pb2+ with another 3 or 2 at slightly larger distances. The simulations of the gas-phase [Pb(H2O)29]2+ cluster were found to capture the main structural features of the diluted aqueous solution.

4.
Phys Chem Chem Phys ; 20(24): 16568-16578, 2018 Jun 20.
Article in English | MEDLINE | ID: mdl-29873361

ABSTRACT

While arsenous acid, As(OH)3, has been the subject of a plethora of studies due to its worldwide ubiquity and its toxicity, pentavalent As in the form of arsenic acid, AsO(OH)3, has recently been found in rivers in central Mexico as the most abundant naturally occurring arsenic species. To better understand the solvation patterns of both toxic acids at the molecular level, we report the results of Born-Oppenheimer molecular dynamics simulations on the aqueous solvation of the AsO(OH)3 and As(OH)3 molecules at room temperature using the cluster microsolvation approach including 30 water molecules at the B3LYP/6-31G** level of theory. We found that the average per-molecule water binding energy is ca. 1 kcal mol-1 larger for the As(v) species as compared to the As(iii) one. To account for the asymmetry of both molecules, the hydration patterns were studied separately for a "lower" hemisphere, defined by the initially protonated oxygens, and for the opposite "upper" hemisphere. Similar lower hydration patterns were found for both As(iii) and As(v), with the same coordination number CN = 7. The upper pattern for As(iii) was found to be of a hydrophobic type, whereas that for As(v) showed the fourth oxygen to be hydrogen-bonded to the water network, yielding CN = 3.7; moreover, a proton "hopped" from the lower to the upper side, through the Grotthuss mechanism. Theoretical EXAFS spectra were obtained that showed good agreement with experimental data for As(iii) and As(v) in liquid water, albeit with somewhat longer As-O distances due to the level of theory employed. Proton transfer processes were also addressed; we found that the singly deprotonated H2AsO3- species largely dominated (99% of the simulation) for the As(iii) case, and that the deprotonated H2AsO4- and HAsO42- species were almost equally present (45% and 55%, respectively) for the As(v) case, which is in line with the experimental data pKa1 = 2.24 and pKa2 = 6.96. Through vibrational analysis the features of the Eigen and Zundel ions were found in the spectra of the microsolvated As(iii) and As(v) species, in good agreement with experimental data in aqueous solutions.

5.
J Chem Phys ; 148(14): 144307, 2018 Apr 14.
Article in English | MEDLINE | ID: mdl-29655339

ABSTRACT

The hydration features of [Mg(H2O)n]2+ and [Ca(H2O)n]2+ clusters with n = 3-6, 8, 18, and 27 were studied by means of Born-Oppenheimer molecular dynamics simulations at the B3LYP/6-31+G** level of theory. For both ions, it is energetically more favorable to have all water molecules in the first hydration shell when n ≤ 6, but stable lower coordination average structures with one water molecule not directly interacting with the ion were found for Mg2+ at room temperature, showing signatures of proton transfer events for the smaller cation but not for the larger one. A more rigid octahedral-type structure for Mg2+ than for Ca2+ was observed in all simulations, with no exchange of water molecules to the second hydration shell. Significant thermal effects on the average structure of clusters were found: while static optimizations lead to compact, spherically symmetric hydration geometries, the effects introduced by finite-temperature dynamics yield more prolate configurations. The calculated vibrational spectra are in agreement with infrared spectroscopy results. Previous studies proposed an increase in the coordination number (CN) from six to eight water molecules for [Ca(H2O)n]2+ clusters when n ≥ 12; however, in agreement with recent measurements of binding energies, no transition to a larger CN was found when n > 8. Moreover, the excellent agreement found between the calculated extended X-ray absorption fine structure spectroscopy spectra for the larger cluster and the experimental data of the aqueous solution supports a CN of six for Ca2+.

6.
J Chem Phys ; 146(8): 084307, 2017 Feb 28.
Article in English | MEDLINE | ID: mdl-28249411

ABSTRACT

In this work, a theoretical investigation was made to assess the coordination properties of Pb(ii) in [Pb(H2O)n]2+ clusters, with n = 4, 6, 8, 12, and 29, as well as to study proton transfer events, by means of Born-Oppenheimer molecular dynamics simulations at the B3LYP/aug-cc-pVDZ-pp/6-311G level of theory, that were calibrated in comparison with B3LYP/aug-cc-pVDZ-PP/aug-cc-pVDZ calculations. Hemidirected configurations were found in all cases; the radial distribution functions (RDFs) produced well defined first hydration shells (FHSs) for n = 4,6,8, and 12, that resulted in a coordination number CN = 4, whereas a clear-cut FHS was not found for n = 29 because the RDF did not have a vacant region after the first maximum; however, three water molecules remained directly interacting with the Pb ion for the whole simulation, while six others stayed at average distances shorter than 4 Å but dynamically getting closer and farther, thus producing a CN ranging from 6 to 9, depending on the criterion used to define the first hydration shell. In agreement with experimental data and previous calculations, proton transfer events were observed for n≤8 but not for n≥12. For an event to occur, a water molecule in the second hydration shell had to make a single hydrogen bond with a water molecule in the first hydration shell.

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