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1.
Commun Integr Biol ; 17(1): 2360961, 2024.
Article in English | MEDLINE | ID: mdl-38831849

ABSTRACT

In navigating to a better location, mobile organisms in diverse taxa change directions of travel occasionally, including bacteria, archaea, single-celled eukaryotes, and small nematode worms such as Caenorhabditis elegans. In perhaps the most common form of goal-orientated movement, the rate of such turns is adjusted in all these taxa to ascend (or descend) a chemical gradient. Basically, the rate of turns is reduced when the movement results in better conditions. In the bacterium Escherichia coli and in C. elegans, the turns are generated by random-rate processes, in which the probability of a turn occurring is constant at every moment. This is evidenced by a distribution of inter-turn intervals that has an exponential distribution. For the first time, we examined the distribution of inter-turn intervals in the single-celled eukaryote, Paramecium caudatum, in a class exercise for first-year university students. We found clear evidence for an exponential distribution of inter-turn intervals, implying a random-rate process in generating turns in Paramecium. The exercise also shows that university laboratory classes can be used to generate scientific data to address research questions whose answers are as yet unknown.

2.
Mol Phylogenet Evol ; 191: 107977, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38008369

ABSTRACT

A highly endemic ant fauna is found in the arid regions of southern Africa, including species in the genus Ocymyrmex. This genus of ants has higher species richness in the western arid regions of southern Africa compared to tropical and subtropical parts of the continent. The processes that have produced these patterns of diversity and distribution of arid adapted ants in southern Africa have never been investigated. The diversification of many other taxa in the region has been associated with past climate fluctuations that occurred during the Miocene epoch. In this study, the nature and timing of historical processes that may have led to the diversification within Ocymyrmex were assessed. We hypothesized that past climate oscillations, characterized by long periods of aridification, have driven the current distribution of Ocymyrmex species that resulted in the highest species richness of the genus in the Deserts & xeric shrublands biome in southern Africa. Ninety-four Ocymyrmex worker specimens from Botswana, Kenya, Namibia, South Africa, Tanzania and Zimbabwe, representing 21 currently described species and six morphospecies, were included in a phylogenomic analysis. Phylogenies for the genus, based on next generation sequencing data from ultraconserved elements, were inferred using Maximum Likelihood, and a dating analysis was performed using secondary age estimates as calibration points. A distribution database of Ocymyrmex records was used to assign species ranges, which were then coded according to major biomes in southern Africa and used as input for biogeographical analysis. We explored the phylogenomic relationships of Ocymyrmex and analysed these within a biogeographical and paleoclimatic framework to disentangle the potential processes responsible for diversification in this group. Dating analyses estimated that the crown age of Ocymyrmex dates to the Oligocene, around 32 Ma. Diversification within this group occurred between the mid-Miocene (∼12.5 Ma) and Pleistocene (∼2 Ma). Our biogeographic analyses suggest that Ocymyrmex species originated in the south-western region of southern Africa, which is now part of the Deserts & xeric shrublands biome and diversified into eastern subtropical areas during the Pliocene. Paleoclimatic changes resulting in increased aridity during the Miocene likely drove the diversification of the genus Ocymyrmex. It is most likely that the diversification of grasslands, because of historical climate change, facilitated the diversification of these ants to the eastern parts of southern Africa when open grasslands replaced forests during the early Miocene.


Subject(s)
Ants , Animals , Phylogeny , Ants/genetics , Ecosystem , Forests , Africa, Southern
4.
Cureus ; 15(8): e44025, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37746444

ABSTRACT

Pheochromocytomas and paraganglionomas are rare neuroendocrine tumors. The multisystem effects of these tumors on the pregnant woman and fetus, the timing of surgery in relation to the pregnancy, and the pharmacological treatment have several anesthetic implications. Case reports on elective cesarean section followed by postpartum resection of the tumor are scarce. A case is presented of a 31-year-old nulliparous female where an antenatal diagnosis of a paraganglionoma was made at 19 weeks gestation for whom an elective cesarean section was performed at 31 weeks gestation under graded lumbar epidural anesthesia, followed by an elective open surgical removal of the tumor six weeks postpartum.

6.
Anesth Analg ; 136(6): 1220-1226, 2023 06 01.
Article in English | MEDLINE | ID: mdl-37205806
7.
Cureus ; 15(2): e34856, 2023 Feb.
Article in English | MEDLINE | ID: mdl-36923189

ABSTRACT

Awake abdominal surgery is performed daily around the world for caesarean section surgery under lumbar subarachnoid anaesthesia and/or graded lumbar epidural anaesthesia. Reports of awake abdominal surgery under thoracic epidural anaesthesia (TEA) for patients with bowel obstruction are scarce, as this patient population is at high risk for pulmonary aspiration. In this report, we describe a case in which a graded TEA was successfully used as the sole anaesthetic technique in a patient with severe pulmonary disease undergoing an awake emergency laparotomy for bowel ischaemia for whom no postoperative intensive care monitoring was available. No anaesthetic or surgical complications occurred, and the patient was discharged home seven days after the surgical procedure. A 30-day follow-up revealed no residual anaesthetic or surgical complications, with a return to baseline function.

8.
Br J Anaesth ; 130(1): e56-e65, 2023 01.
Article in English | MEDLINE | ID: mdl-35393100

ABSTRACT

Since the performance of the first thoracic spinal anaesthetic in early 1908 many anaesthetists have gained interest in this unorthodox neuraxial anaesthetic technique. The main rationale justifying its use is to prevent complications related to general anaesthesia in high-risk patient populations. There is, however, significant debate regarding this practice around the world. The main concerns are fear of iatrogenic injury to the spinal cord, cephalad spread of local anaesthetic causing a complete spinal block, and haemodynamic instability owing to blockade of cardioaccelerator sympathetic fibres. The purpose of this narrative review is to appraise the literature critically regarding thoracic spinal anaesthesia, to synthesise the available information, and to provide a summary of evidence justifying its use in modern anaesthesia.


Subject(s)
Anesthesia, Spinal , Humans , Anesthesia, Spinal/adverse effects , Anesthetics, Local , Anesthesia, Local , Anesthesia, General
9.
Mol Ecol ; 32(4): 756-771, 2023 02.
Article in English | MEDLINE | ID: mdl-36478264

ABSTRACT

Biological invasions in remote areas that experience low human activity provide unique opportunities to elucidate processes responsible for invasion success. Here we study the most widespread invasive plant species across the isolated islands of the Southern Ocean, the annual bluegrass, Poa annua. To analyse geographical variation in genome size, genetic diversity and reproductive strategies, we sampled all major sub-Antarctic archipelagos in this region and generated microsatellite data for 470 individual plants representing 31 populations. We also estimated genome sizes for a subset of individuals using flow cytometry. Occasional events of island colonization are expected to result in high genetic structure among islands, overall low genetic diversity and increased self-fertilization, but we show that this is not the case for P. annua. Microsatellite data indicated low population genetic structure and lack of isolation by distance among the sub-Antarctic archipelagos we sampled, but high population structure within each archipelago. We identified high levels of genetic diversity, low clonality and low selfing rates in sub-Antarctic P. annua populations (contrary to rates typical of continental populations). In turn, estimates of selfing declined in populations as genetic diversity increased. Additionally, we found that most P. annua individuals are probably tetraploid and that only slight variation exists in genome size across the Southern Ocean. Our findings suggest multiple independent introductions of P. annua into the sub-Antarctic, which promoted the establishment of genetically diverse populations. Despite multiple introductions, the adoption of convergent reproductive strategies (outcrossing) happened independently in each major archipelago. The combination of polyploidy and a mixed reproductive strategy probably benefited P. annua in the Southern Ocean by increasing genetic diversity and its ability to cope with the novel environmental conditions.


Subject(s)
Genetic Variation , Polyploidy , Humans , Genetic Variation/genetics , Reproduction , Geography , Introduced Species , Oceans and Seas , Microsatellite Repeats/genetics
10.
Sci Rep ; 12(1): 14810, 2022 08 31.
Article in English | MEDLINE | ID: mdl-36045215

ABSTRACT

A longstanding question in evolutionary biology is how natural selection and environmental pressures shape the mitochondrial genomic architectures of organisms. Mitochondria play a pivotal role in cellular respiration and aerobic metabolism, making their genomes functionally highly constrained. Evaluating selective pressures on mitochondrial genes can provide functional and ecological insights into the evolution of organisms. Collembola (springtails) are an ancient hexapod group that includes the oldest terrestrial arthropods in the fossil record, and that are closely associated with soil environments. Of interest is the diversity of habitat stratification preferences (life forms) exhibited by different species within the group. To understand whether signals of positive selection are linked to the evolution of life forms, we analysed 32 published Collembola mitogenomes in a phylomitogenomic framework. We found no evidence that signatures of selection are correlated with the evolution of novel life forms, but rather that mutations have accumulated as a function of time. Our results highlight the importance of nuclear-mitochondrial interactions in the evolution of collembolan life forms and that mitochondrial genomic data should be interpreted with caution, as complex selection signals may complicate evolutionary inferences.


Subject(s)
Arthropods , Genome, Mitochondrial , Animals , Arthropods/genetics , Arthropods/metabolism , Evolution, Molecular , Fossils , Genes, Mitochondrial , Insecta/genetics , Phylogeny
11.
Mol Ecol ; 31(6): 1649-1665, 2022 03.
Article in English | MEDLINE | ID: mdl-34181792

ABSTRACT

The link between the successful establishment of alien species and propagule pressure is well-documented. Less known is how humans influence the post-introduction dynamics of invasive alien populations. The latter requires studying parallel invasions by the same species in habitats that are differently impacted by humans. We analysed microsatellite and genome size variation, and then compared the genetic diversity and structure of invasive Poa annua L. on two sub-Antarctic islands: human-occupied Marion Island and unoccupied Prince Edward Island. We also carried out niche modelling to map the potential distribution of the species on both islands. We found high levels of genetic diversity and evidence for extensive admixture between genetically distinct lineages of P. annua on Marion Island. By contrast, the Prince Edward Island populations showed low genetic diversity, no apparent admixture, and had smaller genomes. On both islands, high genetic diversity was apparent at human landing sites, and on Marion Island, also around human settlements, suggesting that these areas received multiple introductions and/or acted as initial introduction sites and secondary sources (bridgeheads) for invasive populations. More than 70 years of continuous human activity associated with a meteorological station on Marion Island led to a distribution of this species around human settlements and along footpaths, which facilitates ongoing gene flow among geographically separated populations. By contrast, this was not the case for Prince Edward Island, where P. annua populations showed high genetic structure. The high levels of genetic variation and admixture in P. annua facilitated by human activity, coupled with high habitat suitability on both islands, suggest that P. annua is likely to increase its distribution and abundance in the future.


Subject(s)
Gene Flow , Microsatellite Repeats , Antarctic Regions , Ecosystem , Genetic Variation/genetics , Human Activities , Humans , Islands , Microsatellite Repeats/genetics
12.
Sci Rep ; 11(1): 20748, 2021 10 21.
Article in English | MEDLINE | ID: mdl-34675315

ABSTRACT

The patchy distribution of trees typical of savannas often results in a discontinuous distribution of water, nutrient resources, and microbial communities in soil, commonly referred to as "islands of fertility". We assessed how this phenomenon may affect the establishment and impact of invasive plants, using the invasion of Opuntia stricta in South Africa's Kruger National Park as case study. We established uninvaded and O. stricta-invaded plots under the most common woody tree species in the study area (Vachellia nilotica subsp. kraussiana and Spirostachys africana) and in open patches with no tree cover. We then compared soil characteristics, diversity and composition of the soil bacterial communities, and germination performance of O. stricta and native trees between soils collected in each of the established plots. We found that the presence of native trees and invasive O. stricta increases soil water content and nutrients, and the abundance and diversity of bacterial communities, and alters soil bacterial composition. Moreover, the percentage and speed of germination of O. stricta were higher in soils conditioned by native trees compared to soils collected from open patches. Finally, while S. africana and V. nilotica trees appear to germinate equally well in invaded and uninvaded soils, O. stricta had lower and slower germination in invaded soils, suggesting the potential release of phytochemicals by O. stricta to avoid intraspecific competition. These results suggest that the presence of any tree or shrub in savanna ecosystems, regardless of origin (i.e. native or alien), can create favourable conditions for the establishment and growth of other plants.


Subject(s)
Introduced Species , Opuntia/physiology , Trees , Ecosystem , Soil/chemistry , Soil Microbiology , South Africa , Trees/physiology , Water/analysis
13.
Ann Bot ; 128(2): 149-157, 2021 07 30.
Article in English | MEDLINE | ID: mdl-33876193

ABSTRACT

BACKGROUND AND AIMS: Invasive species may undergo rapid evolution despite very limited standing genetic diversity. This so-called genetic paradox of biological invasions assumes that an invasive species has experienced (and survived) a genetic bottleneck and then underwent local adaptation in the new range. In this study, we test how often Australian acacias (genus Acacia), one of the world's most problematic invasive tree groups, have experienced genetic bottlenecks and inbreeding. METHODS: We collated genetic data from 51 different genetic studies on Acacia species to compare genetic diversity between native and invasive populations. These studies analysed 37 different Acacia species, with genetic data from the invasive ranges of 11 species, and data from the native range for 36 species (14 of these 36 species are known to be invasive somewhere in the world, and the other 22 are not known to be invasive). KEY RESULTS: Levels of genetic diversity are similar in native and invasive populations, and there is little evidence of invasive populations being extensively inbred. Levels of genetic diversity in native range populations also did not differ significantly between species that have and that do not have invasive populations. CONCLUSION: We attribute our findings to the impressive movement, introduction effort and human usage of Australian acacias around the world.


Subject(s)
Acacia , Acacia/genetics , Australia , Genetic Variation , Humans , Inbreeding , Introduced Species
14.
AoB Plants ; 13(1): plaa069, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33542801

ABSTRACT

Accurate taxonomic identification of alien species is crucial to detect new incursions, prevent or reduce the arrival of new invaders and implement management options such as biological control. Globally, the taxonomy of non-native Prosopis species is problematic due to misidentification and extensive hybridization. We performed a genetic analysis on several Prosopis species, and their putative hybrids, including both native and non-native populations, with a special focus on Prosopis invasions in Eastern Africa (Ethiopia, Kenya and Tanzania). We aimed to clarify the taxonomic placement of non-native populations and to infer the introduction histories of Prosopis in Eastern Africa. DNA sequencing data from nuclear and chloroplast markers showed high homology (almost 100 %) between most species analysed. Analyses based on seven nuclear microsatellites confirmed weak population genetic structure among Prosopis species. Hybrids and polyploid individuals were recorded in both native and non-native populations. Invasive genotypes of Prosopis juliflora in Kenya and Ethiopia could have a similar native Mexican origin, while Tanzanian genotypes likely are from a different source. Native Peruvian Prosopis pallida genotypes showed high similarity with non-invasive genotypes from Kenya. Levels of introduced genetic diversity, relative to native populations, suggest that multiple introductions of P. juliflora and P. pallida occurred in Eastern Africa. Polyploidy may explain the successful invasion of P. juliflora in Eastern Africa. The polyploid P. juliflora was highly differentiated from the rest of the (diploid) species within the genus. The lack of genetic differentiation between most diploid species in their native ranges supports the notion that hybridization between allopatric species may occur frequently when they are co-introduced into non-native areas. For regulatory purposes, we propose to treat diploid Prosopis taxa from the Americas as a single taxonomic unit in non-native ranges.

15.
Microb Ecol ; 82(3): 704-721, 2021 Oct.
Article in English | MEDLINE | ID: mdl-33515051

ABSTRACT

Invasive plants often impact soil conditions, notably through changes in soil chemistry and microbial community composition, potentially leading to altered soil functionality. We determine the impacts of invasive nitrogen-fixing Australian Acacia trees on soil chemistry and function (carbon, nitrogen, and phosphorus cycling) in South Africa's Core Cape Subregion, and whether any differences in soil function are linked to differences in soil chemical properties and bacterial community composition between neighbouring acacia-invaded and uninvaded sites. We do so by using Illumina MiSeq sequencing data together with soil chemistry and soil enzyme activity profiles. Acacias significantly increased levels of soil nitrogen (NO3-, NH4+, and total N), C, and pH. Although we did not find evidence that acacias affected soil bacterial community diversity, we did find them to alter bacterial community composition. Acacias also significantly elevated microbial phosphatase activity, but not ß-glucosidase, whilst having contrasting effects on urease. Changes in soil chemical properties under acacia invasion were found to correlate with changes in enzyme activities for urease and phosphatase. Similarly, changes in soil bacterial community composition were correlated to changes in phosphatase enzymatic activity levels under acacia invasion. Whilst we found evidence for acacias altering soil function by changing soil chemical properties and bacterial community composition, these impacts appear to be specific to local site conditions.


Subject(s)
Acacia , Microbiota , Australia , Nutrients , Soil , Soil Microbiology
16.
New Phytol ; 229(6): 3440-3452, 2021 03.
Article in English | MEDLINE | ID: mdl-33259063

ABSTRACT

Invasive plants often change a/biotic soil conditions to increase their competitiveness. We compared the microbially mediated soil nitrogen (N) cycle of invasive Mikania micrantha and two co-occurring native competitors, Persicaria chinensis and Paederia scandens. We assessed how differences in plant tissue N content, soil nutrients, N cycling rates, microbial biomass and activity, and diversity and abundance of N-cycling microbes associated with these species impact their competitiveness. Mikania micrantha outcompeted both native species by transferring more N to plant tissue (37.9-55.8% more than natives). We found total soil N to be at lowest, and available N highest, in M. micrantha rhizospheres, suggesting higher N cycling rates compared with both natives. Higher microbial biomass and enzyme activities in M. micrantha rhizospheres confirmed this, being positively correlated with soil N mineralization rates and available N. Mikania micrantha rhizospheres harbored highly diverse N-cycling microbes, including N-fixing, ammonia-oxidizing and denitrifying bacteria and ammonia-oxidizing archaea (AOA). Structural equation models indicated that M. micrantha obtained available N via AOA-mediated nitrification mainly. Field data mirrored our experimental findings. Nitrogen availability is elevated under M. micrantha invasion through enrichment of microbes that participate in N cycling, in turn increasing available N for plant growth, facilitating high interspecific competition.


Subject(s)
Mikania , China , Introduced Species , Nitrogen , Soil , Soil Microbiology
17.
Ecol Evol ; 10(23): 13355-13369, 2020 Dec.
Article in English | MEDLINE | ID: mdl-33304543

ABSTRACT

Selecting native species for restoration is often done without proper ecological background, particularly with regard to how native and invasive species interact. Here, we provide insights suggesting that such information may greatly enhance restoration success. The performance of the native vine, Pueraria lobata, and that of the invasive bitter vine, Mikania micrantha, were investigated in South China to test how priority effects (timing and rate of germination and seedling growth) and competition (phytochemical effects and competitive ability) impact invasive plant performance. We found that, in the absence of competition, the germination rate of M. micrantha, but not of P. lobata, was significantly affected by light availability. P. lobata seedlings also performed better than those of M. micrantha during early growth phases. Under competition, negative phytochemical effects of P. lobata on M. micrantha were strong and we found M. micrantha to have lower performance when grown with P. lobata compared to when grown by itself. Relative interaction indexes indicated that, under interspecific competition, P. lobata negatively affected (i.e., inhibited) M. micrantha, whereas M. micrantha positively affected (i.e., facilitated) P. lobata. Higher photosynthetic efficiency and soil nutrient utilization put P. lobata at a further advantage over M. micrantha. Field trails corroborated these experimental findings, showing little recruitment of M. micrantha in previously invaded and cleared field plots that were sown with P. lobata. Thus, P. lobata is a promising candidate for ecological restoration and for reducing impacts of M. micrantha in China. This research illustrates that careful species selection may improve restoration outcomes, a finding that may also apply to other invaded ecosystems and species.

18.
FEMS Microbiol Ecol ; 96(6)2020 06 01.
Article in English | MEDLINE | ID: mdl-32364226

ABSTRACT

Understanding how plant-associated microbial communities assemble and the role they play in plant performance are major goals in microbial ecology. For nitrogen-fixing rhizobia, community assembly is generally driven by host plant selection and soil conditions. Here, we aimed to determine the relative importance of neutral and deterministic processes in the assembly of bacterial communities of root nodules of a legume shrub adapted to extreme nutrient limitation, rooibos (Aspalathus linearis Burm. Dahlgren). We grew rooibos seedlings in soil from cultivated land and wild habitats, and mixtures of these soils, sampled from a wide geographic area, and with a fertilization treatment. Bacterial communities were characterized using next generation sequencing of part of the nodA gene (i.e. common to the core rhizobial symbionts of rooibos), and part of the gyrB gene (i.e. common to all bacterial taxa). Ecological drift alone was a major driver of taxonomic turnover in the bacterial communities of root nodules (62.6% of gyrB communities). In contrast, the assembly of core rhizobial communities (genus Mesorhizobium) was driven by dispersal limitation in concert with drift (81.1% of nodA communities). This agrees with a scenario of rooibos-Mesorhizobium specificity in spatially separated subpopulations, and low host filtering of other bacteria colonizing root nodules in a stochastic manner.


Subject(s)
Fabaceae , Mesorhizobium , Rhizobium , Bacteria/genetics , Rhizobium/genetics , Soil Microbiology , Symbiosis
19.
Curr Biol ; 30(9): R390-R391, 2020 05 04.
Article in English | MEDLINE | ID: mdl-32369747

ABSTRACT

Le Roux et al. suggest that documented increases in local plant richness in response to climate change should consider the nature of 'new' species. They find that species responsible for increases in richness in areas that have experienced significant disturbance and climate change are often invasive and/or weedy species.


Subject(s)
Biodiversity , Climate Change , Plants
20.
J Environ Manage ; 261: 110213, 2020 May 01.
Article in English | MEDLINE | ID: mdl-32148283

ABSTRACT

Biological invasions severely impact on marine ecosystems around the world, but to date management is rare and has not previously been attempted in Africa. This study documents a trial management programme aimed at informing a national management strategy for the invasive European shore crab, Carcinus maenas, in South Africa. The approach involved testing control methods used elsewhere (baited traps, crab condos, diver collections and sediment dredging) and adapting these to the local context. Following these trials, baited traps were deployed over the course of the year, and the catch per unit effort (CPUE) tracked. A total of 36,244 crabs were collected during the management period, six times more than a pre-management population estimate. The population was not extirpated and CPUE increased once trapping ceased. The cost of attempting nationwide eradication is prohibitive, particularly given the lack of current impacts by this crab in this region and the possibility of reintroduction. We highlight key administrative challenges encountered, and the importance of such pilot trials in setting long-term goals when attempting alien species management interventions.


Subject(s)
Brachyura , Ecosystem , Animals , Goals , South Africa
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