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IEEE Trans Med Imaging ; 36(2): 674-683, 2017 02.
Article in English | MEDLINE | ID: mdl-27845654

ABSTRACT

In this paper, we propose DeepCut, a method to obtain pixelwise object segmentations given an image dataset labelled weak annotations, in our case bounding boxes. It extends the approach of the well-known GrabCut [1] method to include machine learning by training a neural network classifier from bounding box annotations. We formulate the problem as an energy minimisation problem over a densely-connected conditional random field and iteratively update the training targets to obtain pixelwise object segmentations. Additionally, we propose variants of the DeepCut method and compare those to a naïve approach to CNN training under weak supervision. We test its applicability to solve brain and lung segmentation problems on a challenging fetal magnetic resonance dataset and obtain encouraging results in terms of accuracy.


Subject(s)
Neural Networks, Computer , Algorithms , Brain , Humans , Image Enhancement , Image Interpretation, Computer-Assisted , Machine Learning , Magnetic Resonance Imaging , Monte Carlo Method
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