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1.
Methods Mol Biol ; 2661: 233-255, 2023.
Article in English | MEDLINE | ID: mdl-37166641

ABSTRACT

Mammalian mitochondria have their own dedicated protein synthesis system, which produces 13 essential subunits of the oxidative phosphorylation complexes. Here, we describe the in vitro reconstitution of the mammalian mitochondrial translation system, utilizing purified recombinant mitochondrial translation factors, 55S ribosomes from pig liver mitochondria, and a heterologous yeast tRNA mixture. The system is capable of translating leaderless mRNAs encoding model proteins, such as nanoluciferase with a molecular weight of 19 kDa, and is readily applicable for in vitro evaluations of mRNAs and nascent peptide chain sequences, as well as factors and small molecules that affect mitochondrial translation.


Subject(s)
Protein Biosynthesis , Ribosomes , Swine , Animals , Ribosomes/metabolism , Mammals/genetics , Mammals/metabolism , Mitochondria/metabolism , Peptides/metabolism , Saccharomyces cerevisiae/genetics , Mitochondrial Proteins/metabolism
2.
Nucleic Acids Res ; 49(1): 371-382, 2021 01 11.
Article in English | MEDLINE | ID: mdl-33300043

ABSTRACT

Mammalian mitochondria have their own dedicated protein synthesis system, which produces 13 essential subunits of the oxidative phosphorylation complexes. We have reconstituted an in vitro translation system from mammalian mitochondria, utilizing purified recombinant mitochondrial translation factors, 55S ribosomes from pig liver mitochondria, and a tRNA mixture from either Escherichia coli or yeast. The system is capable of translating leaderless mRNAs encoding model proteins (DHFR and nanoLuciferase) or some mtDNA-encoded proteins. We show that a leaderless mRNA, encoding nanoLuciferase, is faithfully initiated without the need for any auxiliary factors other than IF-2mt and IF-3mt. We found that the ribosome-dependent GTPase activities of both the translocase EF-G1mt and the recycling factor EF-G2mt are insensitive to fusidic acid (FA), the translation inhibitor that targets bacterial EF-G homologs, and consequently the system is resistant to FA. Moreover, we demonstrate that a polyproline sequence in the protein causes 55S mitochondrial ribosome stalling, yielding ribosome nascent chain complexes. Analyses of the effects of the Mg concentration on the polyproline-mediated ribosome stalling suggested the unique regulation of peptide elongation by the mitoribosome. This system will be useful for analyzing the mechanism of translation initiation, and the interactions between the nascent peptide chain and the mitochondrial ribosome.


Subject(s)
Mitochondria/metabolism , Mitochondrial Proteins/biosynthesis , Mitochondrial Ribosomes/metabolism , Peptides/metabolism , Protein Biosynthesis , RNA, Messenger/genetics , 5' Untranslated Regions , Animals , Cell-Free System , DNA/chemical synthesis , Escherichia coli , Eukaryotic Initiation Factors/metabolism , Humans , Luciferases/biosynthesis , Luciferases/genetics , Magnesium/pharmacology , Mitochondrial Proteins/genetics , Mitochondrial Ribosomes/drug effects , Mitochondrial Ribosomes/ultrastructure , Oxidative Phosphorylation , Peptide Chain Initiation, Translational , Peptide Elongation Factors/physiology , Peptides/genetics , Protein Biosynthesis/drug effects , Recombinant Proteins/metabolism , Saccharomyces cerevisiae , Swine , Tetrahydrofolate Dehydrogenase/biosynthesis , Tetrahydrofolate Dehydrogenase/genetics
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