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1.
Cancer Discov ; 13(3): 672-701, 2023 03 01.
Article in English | MEDLINE | ID: mdl-36745048

ABSTRACT

Drugs that kill tumors through multiple mechanisms have the potential for broad clinical benefits. Here, we first developed an in silico multiomics approach (BipotentR) to find cancer cell-specific regulators that simultaneously modulate tumor immunity and another oncogenic pathway and then used it to identify 38 candidate immune-metabolic regulators. We show the tumor activities of these regulators stratify patients with melanoma by their response to anti-PD-1 using machine learning and deep neural approaches, which improve the predictive power of current biomarkers. The topmost identified regulator, ESRRA, is activated in immunotherapy-resistant tumors. Its inhibition killed tumors by suppressing energy metabolism and activating two immune mechanisms: (i) cytokine induction, causing proinflammatory macrophage polarization, and (ii) antigen-presentation stimulation, recruiting CD8+ T cells into tumors. We also demonstrate a wide utility of BipotentR by applying it to angiogenesis and growth suppressor evasion pathways. BipotentR (http://bipotentr.dfci.harvard.edu/) provides a resource for evaluating patient response and discovering drug targets that act simultaneously through multiple mechanisms. SIGNIFICANCE: BipotentR presents resources for evaluating patient response and identifying targets for drugs that can kill tumors through multiple mechanisms concurrently. Inhibition of the topmost candidate target killed tumors by suppressing energy metabolism and effects on two immune mechanisms. This article is highlighted in the In This Issue feature, p. 517.


Subject(s)
Antineoplastic Agents , Melanoma , Humans , Antineoplastic Agents/pharmacology , Receptors, Estrogen , Immunotherapy , Melanoma/pathology , CD8-Positive T-Lymphocytes , Tumor Microenvironment , Cell Line, Tumor , ERRalpha Estrogen-Related Receptor
2.
J Alzheimers Dis ; 21(4): 1271-81, 2010.
Article in English | MEDLINE | ID: mdl-21504136

ABSTRACT

The effect of supplementation with the omega 3 polyunsaturated fatty acid (n3 PUFA) docosahexaenoic acid (DHA) on membrane composition and amyloid-ß1₋42 (Aß42) secretion was studied in human amyloid-ß protein precursor-transfected Chinese Hamster Ovary (CHO) cells. Twenty-four hour incubation with a range of DHA concentrations resulted in a dose-dependent increase in membrane DHA and eicosapentaenoic acid content and a decrease in arachidonic acid content. In addition, DHA supplementation caused a dose-dependent reduction in the secreted Aß42 levels and resulted in a 4-8 fold decrease in extracellular prostaglandin E2 (PGE2) levels. Tocopherol, which was added to DHA to prevent oxidation, may have contributed to the effect of DHA, since it slightly decreased extracellular Aß42 and PGE2 levels when given alone. The addition of selective COX2 inhibitors Celebrex and curcumin to the culture medium resulted in a significant and comparable inhibition of PGE2 release, but did not inhibit Aß42 secretion, and even significantly increased Aß42 production in this cell system. Together, the present data show that, whereas both DHA and COX2 inhibitors may reduce PGE2 production, only DHA in the presence of tocopherol significantly reduced Aß42 production and concurrently changed membrane lipid composition in CHO cells. It is concluded that in this in vitro setting DHA reduced Aß42 secretion through membrane-related, but not PGE2-related mechanisms.


Subject(s)
Amyloid beta-Peptides/antagonists & inhibitors , Amyloid beta-Peptides/metabolism , Amyloid beta-Protein Precursor/antagonists & inhibitors , Amyloid beta-Protein Precursor/metabolism , Dinoprostone/biosynthesis , Docosahexaenoic Acids/pharmacology , Peptide Fragments/antagonists & inhibitors , Peptide Fragments/metabolism , Amyloid beta-Protein Precursor/genetics , Animals , CHO Cells , Cell Membrane/genetics , Cell Membrane/metabolism , Cell Membrane/pathology , Cell Proliferation/drug effects , Cricetinae , Cricetulus , Dinoprostone/antagonists & inhibitors , Dose-Response Relationship, Drug , Humans , Inflammation/genetics , Inflammation/metabolism , Inflammation/pathology , Transfection/methods
3.
Int Immunopharmacol ; 7(13): 1784-92, 2007 Dec 15.
Article in English | MEDLINE | ID: mdl-17996689

ABSTRACT

There is a growing awareness of the interaction of food constituents with the immune system. The present study aims to evaluate the anti-inflammatory effects of two of these nutritional components (glycine and bovine-lactoferrin (b-LF)) using two different mouse models. In a zymosan-induced ear-skin inflammation model both components decreased the inflammatory response locally (ear swelling and inflammatory cytokine concentration in the ears) and systemically (number of TNF-alpha producing spleen cells). Glycine effects (20, 50 or 100 mg/mouse/day) were concentration dependent. B-LF (0.1 or 1 mg/mouse/day) inhibited the inflammatory response although higher doses (5 and 25 mg/mouse/day) were not effective. A combination of b-LF 0.1 mg/mouse/day and glycine 20 or 50 mg/mouse/day counteracted the zymosan-induced ear swelling synergistically and enhanced the decrease in the number of TNF-alpha producing spleen cells of the individual components. In a zymosan-induced acute arthritis model glycine (50 mg/mouse/day) inhibited joint swelling, inflammatory cell infiltration and cartilage proteoglycan depletion. A b-LF dose of 5 mg/mouse/day reduced the zymosan-induced joint swelling without modulating inflammatory cell infiltration and cartilage proteoglycan depletion. The present study indicates that the anti-inflammatory effects of glycine are independent of the used models. B-LF displays a reversed concentration dependency and the activity is model dependent. A combination of glycine and lactoferrin demonstrated a synergistic anti-inflammatory effect on zymosan-induced skin inflammation and an enhanced decrease in the number of TNF-alpha producing spleen cells compared to the effect of the single components. Therefore, this nutritional concept might be a new option for the treatment of chronic inflammatory diseases.


Subject(s)
Anti-Inflammatory Agents/pharmacology , Glycine/pharmacology , Inflammation/drug therapy , Lactoferrin/pharmacology , Administration, Oral , Animals , Disease Models, Animal , Drug Synergism , Glycine/administration & dosage , Inflammation/chemically induced , Lactoferrin/administration & dosage , Male , Mice , Mice, Inbred BALB C , Proteoglycans/metabolism , Tumor Necrosis Factor-alpha/biosynthesis , Zymosan
4.
Muscle Nerve ; 33(5): 691-3, 2006 May.
Article in English | MEDLINE | ID: mdl-16372346

ABSTRACT

CD2F1 mice were inoculated with C26 adenocarcinoma cells, followed by assessment of ex vivo muscular function. Muscles from tumor-bearing mice had a significantly lower force output during a single maximal contraction and during repeated contractions than control muscles. The relative force output, however, did not differ when corrected for muscle mass. Thus, cachexia significantly reduces absolute skeletal muscle function, but muscle "quality" appears unaltered.


Subject(s)
Adenocarcinoma/complications , Cachexia/etiology , Muscle Contraction/physiology , Muscle, Skeletal/physiopathology , Analysis of Variance , Animals , Disease Models, Animal , Electric Stimulation/methods , Male , Mice , Muscle Contraction/radiation effects , Muscle, Skeletal/pathology , Neoplasms, Experimental , Time Factors
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