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1.
Methods Mol Biol ; 2657: 3-14, 2023.
Article in English | MEDLINE | ID: mdl-37149519

ABSTRACT

The quantitation of liberated reducing sugars by the copper-bicinchoninic acid (BCA) assay provides a highly sensitive method for the measurement of glycoside hydrolase (GH) activity, particularly on soluble polysaccharide substrates. Here we describe a straightforward method adapted to low-volume polymerase chain reaction (PCR) tubes that enables the rapid, parallel determination of GH kinetics in applications ranging from initial activity screening and assay optimization to precise Michaelis-Menten analysis.


Subject(s)
Glycoside Hydrolases , Quinolines , Copper , Polysaccharides
2.
ACS Chem Biol ; 16(11): 2087-2102, 2021 11 19.
Article in English | MEDLINE | ID: mdl-34709792

ABSTRACT

The ß-glucans are a disparate group of structurally diverse polysaccharides, whose members are widespread in human diets as components of the cell walls of plants, algae, and fungi (including yeasts), and as bacterial exopolysaccharides. Individual ß-glucans from these sources have long been associated with positive effects on human health through metabolic and immunological effects. Remarkably, the ß-configured glucosidic linkages that define these polysaccharides render them inaccessible to the limited repertoire of digestive enzymes encoded by the human genome. As a result, the various ß-glucans become fodder for the human gut microbiota (HGM) in the lower gastrointestinal tract, where they influence community composition and metabolic output, including fermentation to short chain fatty acids (SCFAs). Only recently, however, have the specific molecular systems that enable the utilization of ß-glucans by select members of the HGM been fully elucidated by combined genetic, biochemical, and structural biological approaches. In the context of ß-glucan structures and their effects on human nutrition and health, we summarize here the functional characterization of individual polysaccharide utilization loci (PULs) responsible for the saccharification of mixed-linkage ß(1→3)/ß(1→4)-glucans, ß(1→6)-glucans, ß(1→3)-glucans, ß(1→2)-glucans, and xyloglucans in symbiotic human gut bacteria. These exemplar PULs serve as well-defined biomarkers for the prediction of ß-glucan metabolic capability in individual bacterial taxa and across the global human population.


Subject(s)
Gastrointestinal Microbiome/physiology , beta-Glucans/metabolism , Bacteria/enzymology , Bacteria/genetics , Bacteria/metabolism , Fermentation , Glycoside Hydrolases/chemistry , Glycoside Hydrolases/genetics , Glycoside Hydrolases/metabolism , Humans , beta-Glucans/chemistry
3.
Chem Pharm Bull (Tokyo) ; 50(6): 861-2, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12045350

ABSTRACT

Three new cardiac glycosides named cheiranthoside VIII (1), cheiranthoside IX (2) and cheiranthoside X (3) were isolated from the seeds of Erysimum cheiranthoides. Based on spectroscopic data, the structures of 1-3 were characterized as strophanthidin 3-O-beta-D-glucopyranosyl-(1-->4)-beta-D-antiaropyranoside, cheiranthidin 3-O-beta-D-glucopyranosyl-(1-->4)-beta-D-boiviopyranoside and cheiranthidin 3-O-alpha-L-rhamnopyranosyl-(1-->4)-beta-D-digitoxopyranoside, respectively. The aglycone moiety possessing a carboxyl group at C-10 of 2 and 3 was regarded to be determined for the first time.


Subject(s)
Brassicaceae/chemistry , Cardiac Glycosides/isolation & purification , Glycosides/isolation & purification , Steroids/isolation & purification , Cardiac Glycosides/chemistry , Glycosides/chemistry , Seeds/chemistry , Steroids/chemistry
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