ABSTRACT
We demonstrate quantum walks of a photon pair in a spatially extended Einstein-Podolsky-Rosen state coupled into an on-chip multiport photonic lattice. By varying the degree of entanglement we observe Anderson localization for pairs in a separable state and Anderson colocalization for pairs in an Einstein-Podolsky-Rosen entangled state. In the former case, each photon localizes independently, while in the latter neither photon localizes, but the pair colocalizes--revealing unexpected survival of the spatial correlations through strong disorder.
ABSTRACT
Azorhizobium caulinodans is able to fix nitrogen in the free-living state and in symbiosis with the tropical legume Sesbania rostrata. The bacteria accumulate poly-beta-hydroxybutyrate (PHB) under both conditions. The structural gene for PHB synthase, phbC, was inactivated by insertion of an interposon. The mutant strains obtained were devoid of PHB, impaired in their growth properties, totally devoid of nitrogenase activity ex planta (Nif-), and affected in nucleotide pools and induced Fix- nodules devoid of bacteria. The Nif- phenotype was the consequence of the lack of nifA transcription. Nitrogenase activity was partially restored to a phbC mutant by constitutive expression of the nifA gene. However, this constitutive nifA expression had no effect on the nucleotide content or on growth of the phbC mutant. It is suggested that PHB is required for maintaining the reducing power of the cell and therefore the bacterial growth. These observations also suggest a new control of nifA expression to adapt nitrogen fixation to the availability of carbon and reducing equivalents.
Subject(s)
Acyltransferases/genetics , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial/physiology , Hydroxybutyrates/metabolism , Polyesters/metabolism , Rhizobiaceae/genetics , Transcription Factors/genetics , Acyltransferases/physiology , Fabaceae/microbiology , Genes, Bacterial/genetics , Molecular Sequence Data , Mutagenesis, Insertional , Nitrogen Fixation/genetics , Nitrogenase/metabolism , Nucleotides/analysis , Plant Roots , Plants, Medicinal , Rhizobiaceae/enzymology , Rhizobiaceae/growth & developmentABSTRACT
Constitutive expression of foreign glutamate dehydrogenase in Rhizobium etli inhibits bean plant nodulation (A. Mendoza, A. Leija, E. Martínez-Romero, G. Hernández, and J. Mora. Mol. Plant-Microbe Interact. 8:584-592, 1995). Here we report that this inhibition is overcome when controlling gdhA expression by NifA, thus delaying the GDH activity onset after nodule establishment. Expression of gdhA modifies the nitrogen partitioning inside the bacteroid, where newly synthesized ammonia is preferentially incorporated into the amino acid pool instead of being exported to the infected cells. As a consequence, the fixed nitrogen transport to the leaves, measured as the ureides content in xylem sap, is significantly reduced. Nitrogenase activity, although not nifHDK expression, is significantly reduced in bacteroids expressing gdhA, probably due to the utilization of energy and reducing power for nitrogen assimilation. Here we show that ammonia assimilation inside R. etli bacteroids is active, albeit at low levels, and when enhanced is deleterious to the symbiotic performance. This leads us to believe that further reduction of the basal nitrogen metabolism in the bacteroid might stimulate the nitrogenase activity and increase the nitrogen supply to the plant.
Subject(s)
Bacterial Proteins/metabolism , Glutamate Dehydrogenase/genetics , Nitrogen Fixation/genetics , Rhizobium/genetics , Symbiosis , Transcription Factors/metabolism , Base Sequence , Fabaceae/enzymology , Fabaceae/ultrastructure , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Microscopy, Electron , Molecular Sequence Data , Plant Roots/enzymology , Plant Roots/ultrastructure , Plants, Medicinal , Plasmids , Rhizobium/enzymologyABSTRACT
Rhizobium etli accumulates poly-beta-hydroxybutyrate (PHB) in symbiosis and in free life. PHB is a reserve material that serves as a carbon and/or electron sink when optimal growth conditions are not met. It has been suggested that in symbiosis PHB can prolong nitrogen fixation until the last stages of seed development, but experiments to test this proposition have not been done until now. To address these questions in a direct way, we constructed an R. etli PHB-negative mutant by the insertion of an Omega-Km interposon within the PHB synthase structural gene (phaC). The identification and sequence of the R. etli phaC gene are also reported here. Physiological studies showed that the PHB-negative mutant strain was unable to synthesize PHB and excreted more lactate, acetate, pyruvate, beta-hydroxybutyrate, fumarate, and malate than the wild-type strain. The NAD+/NADH ratio in the mutant strain was lower than that in the parent strain. The oxidative capacity of the PHB-negative mutant was reduced. Accordingly, the ability to grow in minimal medium supplemented with glucose or pyruvate was severely diminished in the mutant strain. We propose that in free life PHB synthesis sequesters reductive power, allowing the tricarboxylic acid cycle to proceed under conditions in which oxygen is a limiting factor. In symbiosis with Phaseolus vulgaris, the PHB-negative mutant induced nodules that prolonged the capacity to fix nitrogen.
Subject(s)
Acyltransferases/genetics , Genes, Bacterial , Hydroxybutyrates/metabolism , Mutation , Polyesters/metabolism , Rhizobium/genetics , Amino Acid Sequence , Amino Acids/metabolism , Base Sequence , Carboxylic Acids/metabolism , Glycogen/biosynthesis , Molecular Sequence Data , NAD/analysis , Oxidation-Reduction , Pyruvate Dehydrogenase Complex/analysis , Rhizobium/enzymology , Rhizobium/ultrastructure , Sequence Analysis, DNAABSTRACT
The modification of the ammonium assimilation pathway of Rhizobium etli (GS-GOGAT) by adding an additional ammonium assimilation enzyme, GDH, strongly affects its symbiotic interaction with beans. The plasmid pAM1a, based in the stable vector pTR101 (M. Weinstein, R. C. Roberts, and D. R. Helsinki, J. Bacteriol. 174,7486-7489, 1992), containing the Escherichia coli gdhA gene flanked by two transcription-translation terminators was constructed. The expression of GDH in both, the wild type (CFN42/pAM1a) and a ntrC- mutant (CFN2012/pAM1a) R. etli strains, gave a similar metabolic effect, i.e., high GDH and reduced GOGAT activities, and an increased synthesis and excretion of several amino acids. The total inhibition of bean nodulation was observed when the minimum optimal inoculum of R. etli CFN42/pAM1a was used; however, an effective symbiosis occurred with the CFN2012/pAM1a mutant strain. While a total inhibition of the induction of the nodA gene by bean root exudate or by naringenin was observed in the CFN42/pAM1a strain, at 10 mM ammonium, the CFN2012/pAM1a showed an optimal nodA gene induction. A correlation between nodA gene induction, Nod factor production, and nodulation was observed. We conclude that in R. etli, there is a down-regulation of nod gene expression and nodulation when a high internal nitrogen content is built up by the presence of a functional GDH and that NtrC is involved in such regulation. An instability of the plasmid harboring the gdhA gene was observed during symbiosis, indicating a strong selection against cells containing this plasmid.
Subject(s)
Fabaceae/microbiology , Plants, Medicinal , Quaternary Ammonium Compounds/metabolism , Rhizobium/metabolism , Down-Regulation , Escherichia coli/enzymology , Escherichia coli/genetics , Genes, Bacterial , Glutamate Dehydrogenase/genetics , Phenotype , Plasmids/genetics , Rhizobium/genetics , SymbiosisABSTRACT
Experience from different laboratories indicates that Rhizobium strains can generate variability in regard to some phenotypic characteristics such as colony morphology or symbiotic properties. On the other hand, several reports suggest that under certain stress conditions or genetic manipulations Rhizobium cells can present genomic rearrangements. In search of frequent genomic rearrangements, we analyzed three Rhizobium strains under laboratory conditions that are not considered to cause stress in bacterial populations. DNAs from direct descendants of a single cell were analyzed in regard to the hybridization patterns obtained, using as probes different recombinant plasmids or cosmids; while most of the probes utilized did not show differences in the hybridization patterns, some of them revealed the occurrence of frequent genomic rearrangements. The implications and possible biological significance of these observations are discussed.
Subject(s)
DNA, Bacterial/genetics , Genes, Bacterial , Mutation , Rhizobium/genetics , Cloning, Molecular , Genetic Variation , Nucleic Acid HybridizationABSTRACT
Mucor rouxii organisms growing aerobically and exponentially on a well-defined minimal medium are able to differentiate as yeasts or as mycelia, depending on the amino acid as the nitrogen source. When certain amino acids were used as the nitrogen source, spores differentiated only as hyphae, whereas other amino acids gave rise to other morphological forms having different ratios of yeasts to hyphae. In both hyphal and yeast cultures, an aerobic metabolism was predominant, as shown by determining several metabolic parameters such as oxygen tension, glucose consumption, ethanol production, and CO2 release. A complete conversion of yeasts to hyphae was obtained by the appropriate change in the amino acid used as nitrogen source. By preparing spheroplasts from mycelial cultures and transferring them to media with amino acids that induce yeast formation, a 50% yield in the reverse transformation was achieved. A correlation between the change in pH of the medium and cell morphology was observed in different growth conditions. Decrease in the pH of the medium preceded the appearance of hyphae. Also, when the initial pH of the medium was increased, aspartate-containing cultures developed mainly as mycelia, instead of yeasts, with a corresponding decrease in the final pH.