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1.
Nat Commun ; 15(1): 1908, 2024 Mar 08.
Article in English | MEDLINE | ID: mdl-38459023

ABSTRACT

Liver injury is a core pathological process in the majority of liver diseases, yet the genetic factors predisposing individuals to its initiation and progression remain poorly understood. Here we show that asialoglycoprotein receptor 1 (ASGR1), a lectin specifically expressed in the liver, is downregulated in patients with liver fibrosis or cirrhosis and male mice with liver injury. ASGR1 deficiency exacerbates while its overexpression mitigates acetaminophen-induced acute and CCl4-induced chronic liver injuries in male mice. Mechanistically, ASGR1 binds to an endoplasmic reticulum stress mediator GP73 and facilitates its lysosomal degradation. ASGR1 depletion increases circulating GP73 levels and promotes the interaction between GP73 and BIP to activate endoplasmic reticulum stress, leading to liver injury. Neutralization of GP73 not only attenuates ASGR1 deficiency-induced liver injuries but also improves survival in mice received a lethal dose of acetaminophen. Collectively, these findings identify ASGR1 as a potential genetic determinant of susceptibility to liver injury and propose it as a therapeutic target for the treatment of liver injury.


Subject(s)
Acetaminophen , Liver , Animals , Humans , Male , Mice , Acetaminophen/toxicity , Asialoglycoprotein Receptor/genetics , Asialoglycoprotein Receptor/metabolism , Endoplasmic Reticulum Stress , Fibrosis , Liver/metabolism , Liver Cirrhosis/pathology
2.
Am J Cancer Res ; 13(11): 5174-5196, 2023.
Article in English | MEDLINE | ID: mdl-38058844

ABSTRACT

Ferroptosis has demonstrated significant potential in treating radiochemotherapy-resistant cancers, but its efficacy can be affected by recently discovered ferroptosis suppressors. In this study, we discovered that NR0B1 protects against erastin- or RSL3-induced ferroptosis in lung cancer cells. Transcriptomic analysis revealed that NR0B1 significantly interfered with the expression of 12 ferroptosis-related genes, and the expression level of NR0B1 positively correlated with that of c-JUN, NRF2, and CBS. We further revealed that NR0B1 suppression of ferroptosis depended on the activities of c-JUN, NRF2, and CBS. NR0B1 directly promoted the expression of NRF2 and c-JUN and indirectly upregulated CBS expression through enhancing NRF2 and/or c-JUN transcription. Moreover, we showed that NR0B1 depletion restrained xenograft tumor growth and facilitated RSL3-induced ferroptosis in the tumors. In conclusion, our findings uncover that NR0B1 suppresses ferroptosis by activating the c-JUN/NRF2-CBS signaling pathway in lung cancer cells, providing new evidence for the involvement of NR0B1 in drug resistance during cancer therapy.

3.
Aquac Nutr ; 2023: 8325440, 2023.
Article in English | MEDLINE | ID: mdl-37664404

ABSTRACT

This study investigated the dietary effects of lipid and protein levels on growth performance, feed utilization, body composition, lipid metabolism, and antioxidant capacity of triploid rainbow trout, Oncorhynchus mykiss. A 3 × 2 two-factor design was conducted with three crude lipid levels of 4%, 9%, and 14% (L4, L9, and L14) and two crude protein levels of 44%, 49% (P44, P49). Therefore, a total of six diets were prepared as P44/L4, P44/L9, P44/L14, P49/L4, P49/L9, and P49/L14. Triploid rainbow trout (initial body weight 65.0 ± 0.1 g) were fed one of the six diets for 80 days. The results showed that weight gain (WG), protein retention (PR), and protein efficiency rate (PER) significantly increased with increasing the dietary lipid level at the same crude protein level, while feed conversion ratio (FCR) and hepatosomatic index significantly decreased (P < 0.05). At the same lipid level, there was no difference in WG, FCR, PR, PER between 44% and 49% crude protein group (P > 0.05). The P49/L14 group had the highest WG (374.6%) and lowest FCR (1.25), while P44/L14 group had the highest PER (1.80) and PR (25.06%) with similar WG and FCR to P49/L14 group. The crude lipid contents in whole fish were significantly higher in the L14 group than those in the L4 and L9 groups (P < 0.05). Muscle n-3 PUFAs, n-6 PUFAs, and PUFAs levels were positively correlated with dietary lipid level, while n-6 PUFAs was negatively correlated with dietary protein level. Dietary protein, dietary lipid, and their interaction significantly affected hepatic malondialdehyde (MDA) content, aspartate aminotransferase, lipase (LPS), and fatty acid synthase (FAS) activities (P < 0.05). In both P44 and P49 groups, LPS and FAS activities increased with increasing the dietary lipid level. MDA content significantly decreased in the P44 group and increased in the P49 group with increasing the dietary lipid level (P < 0.05). As dietary protein level increased, serum total cholesterol level increased, while hepatic phosphoenolpyruvate carboxykinase activity decreased. With increasing the dietary lipid level, total superoxide dismutase, catalase, total nitric oxide synthase, and fructose-1,6-bisphosphatase activities showed an increasing trend, while the opposite was true for alanine aminotransferase activity. In conclusion, based on growth performance and feed utilization, dietary protein level of 44% and dietary lipid level of 14% (measured value, 43.71% and 13.62%) were suggested for young triploid rainbow trout.

4.
Front Public Health ; 11: 1084005, 2023.
Article in English | MEDLINE | ID: mdl-36875399

ABSTRACT

Background: Osteoporosis has already been a growing health concern worldwide. The influence of living area, lifestyle, socioeconomic, and medical conditions on the occurrence of osteoporosis in the middle-aged and elderly people in China has not been fully addressed. Methods: The study was a multicenter cross-sectional study on the middle-aged and elderly permanent residents, which gathered information of 22,081 residents from June 2015 to August 2021 in seven representative regions of China. The bone mineral density of lumbar vertebrae and hip were determined using the dual-energy X-ray absorptiometry densitometer instruments. Serum levels of bone metabolism markers were also measured. Information about education, smoking, and chronic diseases were also collected through face-to-face interviews. Age-standardized prevalence and 95% confidence intervals (CIs) of osteopenia and osteoporosis by various criteria were estimated by subgroups and overall based on the data of China 2010 census. The relationships between the osteoporosis or osteopenia and sociodemographic variables or other factors were examined using univariate linear models and multivariable multinomial logit analyses. Results: After screening, 19,848 participants (90%) were enrolled for the final analysis. The age-standardized prevalence of osteoporosis was estimated to be 33.49%(95%CI, 32.80-34.18%) in the middle-aged and elderly Chinese permanent residents, for men and women was 20.73% (95% CI, 19.58-21.87%) and 38.05% (95% CI, 37.22-38.89%), respectively. The serum concentrations of bone metabolic markers, and calcium and phosphorus metabolism were influenced by age, body mass index (BMI), gender, education level, regions, and bone mass status. Women, aged 60 or above, BMI lower than 18.5 kg/m2, low education level including middle school, primary school and no formal education as well as current regular smoking, a history of fracture were all significantly associated with a higher risk of osteoporosis and osteopenia in the middle-aged and elderly people. Conclusions: This study revealed dramatic regional differences in osteoporosis prevalence in China, and female, aged 60 or older, low BMI, low education level, current regular smoking, and a history of fracture were associated with a high risk of osteoporosis. More prevention and treatment resources should be invested into particular population exposed to these risk factors.


Subject(s)
Bone Diseases, Metabolic , Osteoporosis , Aged , Male , Middle Aged , Humans , Female , Smoking , Cohort Studies , Cross-Sectional Studies , Prevalence , China
5.
BMC Endocr Disord ; 22(1): 165, 2022 Jun 27.
Article in English | MEDLINE | ID: mdl-35761253

ABSTRACT

BACKGROUND: The present study investigated the prevalence of osteoporosis (OP) among patients with essential hypertension (EH) in the Changchun community and analysed the correlation between EH and OP. METHODS: The study included 425 subjects with EH and 425 age- and sex-matched healthy controls. Bone mineral density (BMD) and serum creatinine (CR) levels were measured, and the subjects' current EH and OP statuses were surveyed to analyse the correlation between EH and OP. RESULTS: The EH group exhibited lower BMD and a higher rate of having OP than the control group, and this difference was statistically significant (p < 0.05). A significant sex difference in the BMD T-score was observed among the subjects (male: - 1.19 ± 1.55, female: - 1.70 ± 1.34). In both the EH group and the control group, the rate of having OP in females was greater than that in males. However, the OP prevalence among subjects with EH varied significantly by age, body weight, fracture history, nocturnal urination frequency, depression and anxiety status, duration of hypertension, and antihypertensive medication use (p < 0.05). Two-way analysis of variance suggested an effect of the interaction between different EH statuses and bone mass conditions on the serum CR values (F = 3.584, p = 0.028, bias η2 = 0.008). CONCLUSIONS: The prevalence of OP and low BMD were significantly higher among subjects with EH than among healthy controls. Additionally, the findings indicate that age, weight, fracture history, nocturnal urination frequency, depression and anxiety, duration of hypertension and antihypertensive drug use may be correlated to having OP in EH subjects, requiring further studies. Moreover, serum CR levels in subjects with different bone mass profiles were strongly influenced by the presence or absence of EH, and the serum CR levels differed significantly with the interaction of these two factors.


Subject(s)
Fractures, Bone , Hypertension , Osteoporosis , Bone Density , Essential Hypertension/complications , Essential Hypertension/epidemiology , Female , Humans , Hypertension/epidemiology , Male , Osteoporosis/drug therapy , Osteoporosis/epidemiology , Osteoporosis/etiology , Prevalence , Risk Factors
6.
Zhongguo Zhong Yao Za Zhi ; 47(4): 1120-1125, 2022 Feb.
Article in Chinese | MEDLINE | ID: mdl-35285213

ABSTRACT

Since the implementation of drug registration in China, the classification of Chinese medicine has greatly met the needs of public health and effectively guided the transformation, inheritance, and innovation of research achievements on traditional Chinese medicine(TCM). In the past 30 years, the development of new Chinese medicine has followed the registration transformation model of " one prescription for single drug". This model refers to the R&D and registration system of modern drugs, and approximates to the " law-abiding" medication method in TCM clinic, while it rarely reflects the sequential therapy of syndrome differentiation and comprehensive treatment with multiple measures. In 2017, Opinions on Deepening the Reform of Review and Approval System and Encouraging the Innovation of Drugs and Medical Devices released by the General Office of the CPC Central Committee and the General Office of the State Council pointed out that it is necessary to " establish and improve the registration and technical evaluation system in line with the characteristics of Chinese medicine, and handle the relationship between the traditional advantages of Chinese medicine and the requirements of modern drug research". Therefore, based on the development law and characteristics of TCM, clinical thinking should be highlighted in the current technical requirements and registration system of research and development of Chinese medicine. Based on the current situation of registration supervision of Chinese medicine and the modern drug research in China, the present study analyzed limitations and deficiency of " one prescription for single drug" in the research and development of Chinese medicine. Additionally, a new type of " series prescriptions" was proposed, which was consistent with clinical thinking and clinical reality. This study is expected to contribute to the independent innovation and high-quality development of the TCM industry.


Subject(s)
Drugs, Chinese Herbal , Medicine, Chinese Traditional , China , Drugs, Chinese Herbal/therapeutic use , Prescriptions , Public Health
7.
Biomed Res Int ; 2021: 3931750, 2021.
Article in English | MEDLINE | ID: mdl-34621894

ABSTRACT

Xianling Gubao Capsule (XGC), a kind of capsule preparation of Chinese herbal officially approved for sale by the National Medical Products Administration (NMPA), has the effect of tonifying kidney and strengthening bones. Although the impact of XGC in treating bone diseases has been widely studied, the effect of XGC in kidney injury is unknown yet. The kidney injury model is established by intraperitoneal injection with cadmium chloride (CdCl2). Before model establishment, each XGC group was pregavaged with XGC for 10 d. After 10 d, CdCl2 was injected intraperitoneally into the model group and each XGC group, each XGC group continued to be gavaged with XGC for 4 weeks, and the control group was gavaged with equal doses of distilled water once daily. The level of serum urea nitrogen (BUN) and serum creatinine (Cr) is evaluated by kit. The effect of XGC on protecting kidney injury in mice with kidney injury is analyzed by histopathology (HE stain), immunohistochemistry (IHC), and real-time fluorescence quantitative PCR (RT-qPCR). The results show that CdCl2 significantly increases the level BUN and Cr in serum and results in remarkable pathological changes in the nephron, including tubule edema, congestion, and necrosis. While oral administration of XGC can significantly decrease BUN and Cr in serum and prevent and protect the kidney from the above injuries. In addition, the protein expression of p-mTOR was remarkably reduced, and the ratio of LC3II/LC3I protein and mRNA was significantly increased in mice with oral administration of XGC. Our findings suggest that XGC can prevent and protect kidney injury by improving the state of renal tubular hyperemia and necrosis and reduce the level of BUN and Cr in cadmium poisoning mice.


Subject(s)
Cadmium/toxicity , Drugs, Chinese Herbal/pharmacology , Kidney/injuries , Animals , Autophagy/drug effects , Autophagy/genetics , Blood Urea Nitrogen , Capsules , Creatinine/blood , Female , Gene Expression Regulation/drug effects , Kidney/drug effects , Kidney/pathology , Kidney/physiopathology , Mice, Inbred C57BL , RNA, Messenger/genetics , RNA, Messenger/metabolism
8.
Mol Genet Genomics ; 296(1): 33-40, 2021 Jan.
Article in English | MEDLINE | ID: mdl-32944789

ABSTRACT

Joubert syndrome (JBTS), a rare genetic disorder resulted from primary cilium defects or basal-body dysfunction, is characterized by agenesis of cerebellar vermis and abnormal brain stem. Both genotypes and phenotypes of JBTS are highly heterogeneous. The identification of pathogenic gene variation is essential for making a definite diagnosis on JBTS. Here, we found that hypoplasia of cerebellar vermis occurred in three male members in a Chinese family. Then, we performed whole exome sequencing to identify a novel missense mutation c.599T > C (p. L200P) in the OFD1 gene which is the candidate gene of X-linked JBTS (JBST10). The following analysis showed that the variant was absent in the 1000 Genomes, ExAC and the 200 female controls; the position 200 Leucine residue was highly conserved across species; the missense variant was predicted to be deleterious using PolyPhen-2, PROVEAN, SIFT and Mutation Taster. The OFD1 expression was heavily lower in the proband and an induced male fetus compared with a healthy male with a wild-type OFD1 gene. The in vitro expression analysis of transiently transfecting c.599T or c.599C plasmids into HEK-293T cells confirmed that the missense mutation caused OFD1 reduction at the protein level. And further the mutated OFD1 decreased the level of Gli1 protein, a read-out of Sonic hedgehog (SHH) signaling essential for development of central neural system. A known pathogenic variant c.515T > C (p. L172P) showed the similar results. All of these observations suggested that the missense mutation causes the loss function of OFD1, resulting in SHH signaling impairs and brain development abnormality. In addition, the three patients have Dandy-Walker malformation, macrogyria and tetralogy of Fallot, respectively, the latter two of which are firstly found in JBTS10 patients. In conclusion, our findings expand the context of genotype and phenotype in the JBTS10 patients.


Subject(s)
Abnormalities, Multiple/genetics , Cerebellum/abnormalities , Dandy-Walker Syndrome/genetics , Eye Abnormalities/genetics , Kidney Diseases, Cystic/genetics , Lissencephaly/genetics , Mutation, Missense , Proteins/genetics , Retina/abnormalities , Tetralogy of Fallot/genetics , Abnormalities, Multiple/diagnostic imaging , Abnormalities, Multiple/metabolism , Abnormalities, Multiple/pathology , Amino Acid Sequence , Brain Stem/abnormalities , Brain Stem/diagnostic imaging , Brain Stem/metabolism , Cerebellar Vermis/abnormalities , Cerebellar Vermis/diagnostic imaging , Cerebellar Vermis/metabolism , Cerebellum/diagnostic imaging , Cerebellum/metabolism , Cerebellum/pathology , Child, Preschool , Dandy-Walker Syndrome/diagnostic imaging , Dandy-Walker Syndrome/metabolism , Dandy-Walker Syndrome/pathology , Eye Abnormalities/diagnostic imaging , Eye Abnormalities/metabolism , Eye Abnormalities/pathology , Family , Female , Gene Expression , Genotype , HEK293 Cells , Hedgehog Proteins/deficiency , Hedgehog Proteins/genetics , Humans , Kidney Diseases, Cystic/diagnostic imaging , Kidney Diseases, Cystic/metabolism , Kidney Diseases, Cystic/pathology , Lissencephaly/diagnostic imaging , Lissencephaly/metabolism , Lissencephaly/pathology , Male , Pedigree , Phenotype , Proteins/metabolism , Retina/diagnostic imaging , Retina/metabolism , Retina/pathology , Sequence Alignment , Sequence Homology, Amino Acid , Sex Factors , Signal Transduction , Tetralogy of Fallot/diagnostic imaging , Tetralogy of Fallot/metabolism , Tetralogy of Fallot/pathology , Zinc Finger Protein GLI1/deficiency , Zinc Finger Protein GLI1/genetics
9.
BMJ Open ; 9(11): e028084, 2019 11 24.
Article in English | MEDLINE | ID: mdl-31767578

ABSTRACT

INTRODUCTION: Osteoporotic fracture is one of the most common causes of disability and a major contributor to medical care costs in many regions of the world. The polymorphisms of genes related to vitamin D metabolism and transportation are associated with variation in bone mineral density and the risk of osteoporosis. METHODS AND ANALYSIS: The China Community-based Cohort of Osteoporosis study is an observational, longitudinal, multicentre, prospective cohort study for middle-aged and older permanent residents of China, which has been ongoing in six cities since 2016. Female residents aged 45-80 years old and male residents aged 50-80 years old are identified through permanent resident lists. All the enrolled participants will complete questionnaires on their personal characteristics and histories. The bone mineral density of their lumbar vertebrae and left hip will be measured and serum bone metabolism parameters assessed. Polymorphisms of genes related to vitamin D metabolism and transportation will be detected, and their relationship with the risk of osteoporosis, and osteoporotic fracture, will be analysed. About 18 000 residents will be involved in the study. ETHICS AND DISSEMINATION: The study was approved by Institutional Ethics Board of Longhua Hospital affiliated to Shanghai University of Traditional Chinese Medicine (2016LCSY065). Results will be published in peer-reviewed journals. The results of this study are expected to improve the understanding of the association between polymorphisms of genes related to vitamin D metabolism and transportation and the risk of osteoporosis and osteoporotic fracture among middle-aged and older residents of China. TRIAL REGISTRATION NUMBER: NCT02958020.


Subject(s)
Osteoporosis/genetics , Osteoporotic Fractures/etiology , Polymorphism, Single Nucleotide , Vitamin D/metabolism , Absorptiometry, Photon , Aged , Aged, 80 and over , Bone Density , China/epidemiology , Female , Hip/diagnostic imaging , Humans , Longitudinal Studies , Lumbar Vertebrae/diagnostic imaging , Male , Middle Aged , Multicenter Studies as Topic , Observational Studies as Topic , Osteoporosis/diagnosis , Osteoporosis/epidemiology , Osteoporotic Fractures/epidemiology , Prospective Studies , Research Design , Risk Factors
10.
Fish Physiol Biochem ; 45(4): 1431-1443, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31267430

ABSTRACT

Connective tissue growth factor (ctgf) is involved in the proliferation, migration, adhesion of cell, and the constituent of extracellular matrix, which plays an important role in embryogenesis, angiogenesis, wound repair, and fibrosis diseases. In this study, the cDNA sequence of grass carp ctgf gene was cloned by rapid amplification of cDNA ends (RACE) method; then, the characteristics of this gene and the predicted protein sequence were analyzed by bioinformatics methods, and the tissue differential expression pattern was detected by the quantitative real-time PCR. The results showed that the grass carp ctgf gene has a full-length of 2223 bp, encoding 343 amino acids. The deduced CTGF protein is a hydrophilic and secretary protein with a molecular mass of 37,978.2 Da and an isoelectric point of 8.22. The signal peptide locates between residue positions 1 and 22 of the polypeptide chain. The protein contains α-helix, ß-strand, and loops. The CTGF protein of grass carp shows a homology of 98%, 96%, 91%, and 91% with Wuchang bream (Megalobrama amblycephala), zebrafish (Danio rerio), common carp (Cyprinus carpio), and Mexican tetra (Astyanax mexicanus). The grass carp ctgf gene expressed significantly higher in blood and spleen than that in other tissues (P < 0.05). The low expression tissues included the heart, gill, skin, muscle, kidney, brain, and intestinal, and the lowest expression tissue was the liver. The results are consistent with the function of this gene.


Subject(s)
Carps/genetics , Connective Tissue Growth Factor/genetics , Fish Proteins/genetics , Animals , Cloning, Molecular , Connective Tissue Growth Factor/blood , DNA, Complementary/genetics , Fish Proteins/blood , Gene Expression , Spleen/metabolism
11.
Environ Pollut ; 242(Pt A): 922-930, 2018 Nov.
Article in English | MEDLINE | ID: mdl-30373037

ABSTRACT

The aim of this study was to establish a method for predicting heavy metal concentrations in PM2.5 (particulate matter with a diameter of less than 2.5 µm) using support vector machine (SVM) models combined with magnetic properties of leaves. In this study, PM2.5 samples and the leaves of three common evergreen tree species were collected simultaneously during four different seasons in Nanjing, China. A SVM algorithm was used to establish models for the prediction of airborne heavy metal concentrations based on leaf magnetic properties, with or without meteorological factors and pollutant concentrations as input variables. Results showed that the annual average PM2.5 concentration was 58.47 µg/m3. PM2.5 concentrations, leaf magnetic properties, and nearly all airborne heavy metals had higher concentrations in winter than in spring, summer, or fall. Ferrimagnetic minerals preponderant in dust-loaded leaves were sampled from the three tree species. Models using magnetic properties of leaves from Ligustrum lucidum Ait and Osmanthus fragrans Lour yielded better prediction effects than those based on the leaves of Cedar deodara G. Don, showing relatively higher correlation coefficient (R) values and lower errors in both training and test stages. Fe and Pb concentrations were well-simulated by the prediction models, with R values > 0.7 in both training and test stages. By contrast, the concentrations of V, Co, Sb, Tl, and Zn were relatively poor-simulated, with most R values < 0.7 in both training and test stages. Predictions for the main urban areas of Nanjing showed that the highest heavy metal concentrations occurred near industrial and traffic pollution sources. Our results provide a cost-effective approach for the prediction of airborne heavy metal concentrations based on the biomagnetic monitoring of tree leaves.


Subject(s)
Air Pollutants/analysis , Environmental Monitoring/methods , Magnetics , Metals, Heavy/analysis , Particulate Matter/analysis , China , Dust/analysis , Environmental Pollution/analysis , Industry , Plant Leaves/chemistry , Support Vector Machine , Trees
12.
Environ Sci Pollut Res Int ; 24(32): 25315-25328, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28932943

ABSTRACT

Environmental magnetism is a simple and fast method that can be used to assess heavy metal pollution in urban areas from the relationships between magnetic properties and heavy metal concentrations. Leaves of Osmanthus fragrans, one of the most widely distributed evergreen trees in Nanjing, China, were collected from four different district types, i.e., residential, educational, traffic, and industrial. The magnetic properties and heavy metal concentrations were measured both for unwashed (dust-loaded) and washed leaves. Scanning electron microscopy with energy-dispersive X-ray spectroscopy confirmed that unwashed leaves accumulated much dust due to atmospheric deposition. The value of magnetic properties and heavy metal concentrations in unwashed leaves was significantly higher than those of washed leaves, indicating that these characteristics were mainly derived from atmospheric particulate matter. Saturation isothermal remanent magnetization (SIRM) values obtained from unwashed and washed leaves ranged from 209.14 × 10-6 to 877.85 × 10-6 Am2 kg-1 and from 69.50 × 10-6 to 501.28 × 10-6 Am2 kg-1, respectively. High concentrations of heavy metals, such as Pb and Fe, the Tomlinson pollution load index, and the SIRM of unwashed leaves occurred in the traffic and industrial districts. A preliminary principal component analysis identified the source categories and suggested that industrial activities may be more related to the release of particulate matter rich in Fe. The heavy metal concentrations and pollution load index showed significant positive correlations with the low-frequency magnetic susceptibility and SIRM of unwashed leaves, indicating that these properties can be used to semi-quantify atmospheric heavy metal pollution. Our study suggests that it is possible to employ magnetic measurements as a useful tool for the monitoring and assessment of atmospheric heavy metal pollution.


Subject(s)
Environmental Monitoring , Environmental Pollution , Magnetics , Metals, Heavy , Plant Leaves/chemistry , China , Dust/analysis , Environmental Monitoring/methods , Environmental Pollution/analysis , Industry , Metals, Heavy/analysis , Particulate Matter/analysis , Spectrometry, X-Ray Emission , Trees
13.
Environ Sci Technol ; 51(12): 6927-6935, 2017 Jun 20.
Article in English | MEDLINE | ID: mdl-28581714

ABSTRACT

The development of a reasonable statistical method of predicting the concentrations of fine-particle-bound heavy metals remains challenging. In this study, daily PM2.5 samples were collected within four different seasons from a Chinese mega-city. The annual average PM2.5 concentrations determined in industrial, city center, and suburban areas were 90, 81, and 85 µg m-3, respectively. Environmental magnetic measurements, including magnetic susceptibility, anhysteretic remanent magnetization, isothermal remanent magnetization, hysteresis loops, and thermomagnetism, indicated that the main magnetic mineral of PM2.5 is low-coercivity pseudosingle domain (PSD) magnetite. Using a support vector machine (SVM), both the volume- and mass-related concentrations of heavy metals were predicted by the PM2.5 mass concentrations and meteorological factors, with or without magnetic properties as input variables. The inclusion of magnetic variables significantly improved the prediction results for most heavy metals. Predictions based on models that included the magnetic properties of the metals Al, Fe, Mn, Ni, and Ti were promising, with R values of >0.8 in both the training and the test stages as well as relatively low errors. Our results demonstrate that the inclusion of environmental magnetism in a SVM approach aids in the effective monitoring and assessment of airborne heavy-metal contamination in cities.


Subject(s)
Air Pollutants , Magnetics , Metals, Heavy , Support Vector Machine , Cities , Environmental Monitoring , Forecasting
14.
Chemosphere ; 180: 513-522, 2017 Aug.
Article in English | MEDLINE | ID: mdl-28431389

ABSTRACT

Size-fractionated heavy metal concentrations were observed in airborne particulate matter (PM) samples collected from 2014 to 2015 (spanning all four seasons) from suburban (Xianlin) and industrial (Pukou) areas in Nanjing, a megacity of southeast China. Rapid prediction models of size-fractionated metals were established based on multiple linear regression (MLR), back propagation artificial neural network (BP-ANN) and support vector machine (SVM) by using meteorological factors and PM concentrations as input parameters. About 38% and 77% of PM2.5 concentrations in Xianlin and Pukou, respectively, were beyond the Chinese National Ambient Air Quality Standard limit of 75 µg/m3. Nearly all elements had higher concentrations in industrial areas, and in winter among the four seasons. Anthropogenic elements such as Pb, Zn, Cd and Cu showed larger percentages in the fine fraction (ø≤2.5 µm), whereas the crustal elements including Al, Ba, Fe, Ni, Sr and Ti showed larger percentages in the coarse fraction (ø > 2.5 µm). SVM showed a higher training correlation coefficient (R), and lower mean absolute error (MAE) as well as lower root mean square error (RMSE), than MLR and BP-ANN for most metals. All the three methods showed better prediction results for Ni, Al, V, Cd and As, whereas relatively poor for Cr and Fe. The daily airborne metal concentrations in 2015 were then predicted by the fully trained SVM models and the results showed the heaviest pollution of airborne heavy metals occurred in December and January, whereas the lightest pollution occurred in June and July.


Subject(s)
Air Pollutants/analysis , Environmental Monitoring/methods , Metals/analysis , Particulate Matter/analysis , China , Environmental Pollution/analysis , Environmental Pollution/statistics & numerical data , Industry , Linear Models , Multivariate Analysis , Neural Networks, Computer , Particle Size , Seasons , Support Vector Machine
15.
J Muscle Res Cell Motil ; 37(3): 71-81, 2016 06.
Article in English | MEDLINE | ID: mdl-27334505

ABSTRACT

Unc45 myosin chaperone b(unc45b)gene is a molecular chaperone that mediates the folding, assembly and accumulation of thick-filament myosin in the formation of sarcomere, which plays an important role in the development of striated muscle and the stability of sarcomere. In this study, the complete cDNA sequence of unc45b gene of grass carp was obtained by rapid amplification of cDNA ends (RACE), and the characteristics of the unc45b protein predicted from gene sequence was analyzed by bioinformatics methods. The differential expression pattern in tissues was also detected by quantitative real-time PCR. The results showed that the full-length of unc45b gene of grass carp is 3163 bp, which contains a 60 bp 5'UTR, a 298 bp 3'UTR, and a 2865 bp open reading frame (ORF) encoding a 934 amino acid peptide. The deduced unc45b protein exhibits a homology of 92, 86, 86 % with the protein of zebrafish (Danio rerio), channel catfish (Ietalurus punctatus) and tilapia (Oreochromis niloticus) respectively, and the protein contains UCS myosin head binding domain and TPR peptide repeat domain. The protein is a hydrophilic and non-secretory protein with a molecular mass and isoeletronic point of 103,699.8 and 7.39 Da. The structural elements of the protein includes α-helixes and loops, and the unc45b gene highly expresses in skeletal muscle and heart in grass carp. This study laid a foundation for further research in explaining the myofibril accumulation in crisped grass carp.


Subject(s)
Cloning, Molecular/methods , Nonmuscle Myosin Type IIB/genetics , Animals , Carps
16.
Exp Ther Med ; 12(1): 177-182, 2016 Jul.
Article in English | MEDLINE | ID: mdl-27347036

ABSTRACT

In order to decrease the incidence of flap necrosis after reconstructive surgeries, new approaches are required. In the present study, a model of venous congested flaps in rats was established to test the heat shock protein (HSP) 90α, 'F-5', protein as an intervention therapy to alleviate ischemia-reperfusion injury. A recombinant plasmid pET15b-F-5 carrying the HSP90α gene was constructed and the induced protein was purified from bacterial cell cultures. The rats in the study were divided into three different intervention groups: group A rats were treated with normal saline prior to flap establishment, group B rats were treated with HSP90α, 'F-5', protein prior to flap establishment, and group C rats were treated with the same 'F-5' protein after the surgical procedure. Additionally, the reperfusion time-points, ischemia for 6 or 8 h (5 rats each), were established in each group. After set periods of time, the flaps were observed for skin appearance, blood flow, survival rate and histological changes including neovascularization and re-epithelialization. The results showed that the flaps in the rats pre-treated with 'F-5' protein performed better than the flaps of rats in the other two groups: the blood flow was higher, flap survival rate was increased, inflammatory cell infiltration was decreased and angiogenesis increased, and new skin structure was better completed by the end of the experiment. The parameters examind were improved for all the groups when the ischemia time was 6 h instead of 8 h. In conclusion, HSP90α intervention prior to flap establishment was shown to be beneficial in the model of ischemia-reperfusion injury in venous-congested flaps.

17.
Fish Shellfish Immunol ; 35(5): 1624-34, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24055509

ABSTRACT

Signal transducer and activator of transcription 3 (STAT3) binds to Janus kinase 2 (JAK2) to initiate the JAK2/STAT3 signal transduction pathway, which plays an important role in cancer cell proliferation, immune regulation, reproduction, lipid metabolism, and other physiological processes of the organism. In this study, the cDNA sequence of the STAT3 gene from grass carp was cloned using RACE (rapid-amplification of cDNA ends). Twelve characteristics of the STAT3 gene and its encoded protein sequence were predicted and analyzed using bioinformatics methods; these features included the general physical and chemical properties, the hydrophobicity, the secondary structure and the three-dimensional structure of the protein. Quantitative real-time PCR was employed to detect grass carp STAT3 expression pattern in different tissues. The results showed that the full-length STAT3 gene from grass carp is 2739-bp long and contains a 216-bp 5'UTR, a 300-bp 3'UTR, and a 2223-bp open reading frame (ORF) that encodes a 740-amino acid peptide. The deduced protein exhibited 99%∼94% homology to the STAT3 protein of zebrafish (Danio rerio), medaka (Oryzias latipes), turbot (Scophthalmus maximus), white-spotted char (Salvelinus leucomaenis), mandarin fish (Siniperca chuatsi), rainbow trout (Oncorhynchus mykiss), and green pufferfish (Tetraodon fluviatilis). The deduced grass carp STAT3 protein contains a protein interaction domain, an alpha domain, a DNA binding domain, and an SH2 domain. The STAT3 protein of grass carp is a hydrophilic and non-secretory protein, and its molecular mass and isoeletronic point were found to be 98,5412.1 Da and 6.39, respectively. The structural elements of STAT3 included α-helixes, ß-sheets, and loops. The grass carp STAT3 is expressed in all of the six tissues tested, which were the liver, spleen, gill, muscle, heart, and brain. The highest expression level was found in the liver (P < 0.05), whereas a significantly lower expression level was found in the spleen, gills, brain, and muscle (P < 0.05), and the lowest expression level was found in the heart (P < 0.05). This study provides a basis for further structural and functional exploration of the STAT3 from grass carp, including its deduced protein and its signal transduction function.


Subject(s)
Carps/genetics , STAT3 Transcription Factor/genetics , STAT3 Transcription Factor/metabolism , Analysis of Variance , Animals , Base Sequence , Cloning, Molecular , Computational Biology , DNA Primers/genetics , DNA, Complementary/genetics , Gene Components , Gene Expression Profiling , Isoelectric Point , Liver/metabolism , Molecular Sequence Data , Real-Time Polymerase Chain Reaction , Sequence Analysis, DNA/veterinary , Sequence Homology , Species Specificity
18.
Mol Biol Rep ; 39(10): 9463-72, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22733489

ABSTRACT

MicroRNAs (miRNAs) are an extensive class of newly identified small RNAs that regulate gene expression at post-transcription level by mRNA cleavage or translation. In our study, we used qRT-PCR and found that Vv-miR164 is expression in grapevine leaves, stems, tendrils, inflorescences, flowers and fruits. In addition, two potential target genes for Vv-miR164 were also found and verified by PPM-RACE and RLM-RACE. The results not only maps the cleavage site of the target mRNA but allowed for detection the expression pattern of cleaved fragments that can indicate the regulatory function of this miRNA on its target genes. These target genes were explored by qRT-PCR where some exhibited different expression patterns from their corresponding miRNA, indicating the cleavage mode of the miRNA on its target genes. The efficient and powerful approach used in this study can help in further understanding of how miRNAs cleaved their target mRNAs. Results from this study prove the importance of Vv-miR164 in regulating development and growth of grapes, and adds to the existing knowledge of small RNA-mediated regulation in grapes.


Subject(s)
Genes, Plant , MicroRNAs/metabolism , Plant Components, Aerial/genetics , RNA, Plant/metabolism , Vitis/genetics , Amino Acid Sequence , Base Sequence , Chromosome Mapping , Cloning, Molecular , Gene Expression , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , MicroRNAs/genetics , Molecular Sequence Data , Plant Components, Aerial/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , RNA Interference , RNA, Plant/genetics , Vitis/metabolism
19.
Article in English | MEDLINE | ID: mdl-22613815

ABSTRACT

Bone morphogenetic protein (BMP15) is a member of the transforming growth factor ß (TGF-ß) superfamily with a key role in regulating follicle development in mammals and birds. However, potential ovarian roles of BMPs remain unexplored in teleosts. In this study, the full-length sequences of bmp15 were obtained using rapid-amplification of cDNA ends (RACE). The full-length cDNA sequence of bmp15 is 2217 bp which contained 214 bp 5'-UTR and 845 bp 3'-UTR. The open reading frame (ORF) sequence of bmp15 is 1158 bp, encoding a predicted protein of 385 amino acid residues. BMP15 has a specific RXXR protease cleavage site of TGF-ß superfamily (is RIRR) and six conserved cysteine residues. Using real-time quantitative PCR revealed that bmp15 mRNA was largely expressed in the ovary and testis and mostly in oocytes within the follicle, slightly expressed in muscle, liver and pituitary. BMP15 is mainly present at stage I follicles by real-time quantitative PCR and immunohistochemistry. Phylogenetic analysis showed that gibel carp bmp15 was similar to bmp15 of zebrafish and other fish species. Treatment with human chorionic gonadotropin (hCG) in isolated follicles of gibel carp in vitro showed altered bmp15 mRNA expression: when treated with 10 ng/mL hCG for 10h, the expression level of bmp15 was significantly increased. However, with proceeding cultivation, the expression level of BMP15 mRNA decreased. The results of this study indicate that bmp15 may play a key role during development of follicles in gibel carp, especially in early stage follicles.


Subject(s)
Bone Morphogenetic Protein 15/chemistry , Bone Morphogenetic Protein 15/metabolism , Carps/metabolism , Chorionic Gonadotropin/pharmacology , Ovarian Follicle/drug effects , Ovarian Follicle/metabolism , Amino Acid Sequence , Animals , Base Sequence , Bone Morphogenetic Protein 15/genetics , Carps/genetics , Female , Gene Expression Regulation, Developmental/drug effects , Gene Expression Regulation, Developmental/genetics , Humans , Molecular Sequence Data , Sequence Alignment
20.
Phys Rev Lett ; 108(6): 067004, 2012 Feb 10.
Article in English | MEDLINE | ID: mdl-22401113

ABSTRACT

We successfully tuned an underdoped ultrathin YBa2Cu3O(7-x) film into the overdoped regime by means of electrostatic doping using an ionic liquid as a dielectric material. This process proved to be reversible. Transport measurements showed a series of anomalous features compared to chemically doped bulk samples and a different two-step doping mechanism for electrostatic doping was revealed. The normal resistance increased with carrier concentration on the overdoped side and the high temperature (180 K) Hall number peaked at a doping level of p∼0.15. These anomalous behaviors suggest that there is an electronic phase transition in the Fermi surface around the optimal doping level.

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