Underwater hyperspectral classification of deep sea corals exposed to 2-methylnaphthalene.

Coral reefs around the world are under threat due to anthropogenic impacts on the environment. It is therefore important to develop methods to monitor the status of the reefs and detect changes in the health condition of the corals at an early stage before severe damage occur. In this work, we evaluate underwater hyperspectral imaging as a method to detect changes in health status of both orange and white color morphs of the coral species Lophelia pertusa. Differing health status was achieved by exposing 60 coral samples to the toxic compound 2-methylnaphthalene in concentrations of 0 mg L-1 to 3.5 mg L-1. A machine learning model was utilized to classify corals according to lethal concentration (LC) levels LC5 (5% mortality) and LC25 (25% mortality), solely based on their reflectance spectra. All coral samples were classified to correct concentration group. This is a first step towards developing a remote sensing technique able to assess environmental impact on deep-water coral habitats over larger areas.

Coherent effects in the scattering of light from two-dimensional rough metal surfaces.

We investigate numerically multiple light-scattering phenomena for two-dimensional randomly rough metallic surfaces, where surface plasmon polaritons (SPPs) mediate several surface scattering effects. The scattering problem is solved by numerical solution of the reduced Rayleigh equation for reflection. The multiple scattering phenomena of enhanced backscattering and enhanced forward scattering are observed in the same system, and their presence is due to the excitation of SPPs. The numerical results discussed are qualitatively different from previous results for one-dimensionally rough surfaces, as one-dimensional surfaces have a limited influence on the polarization of light.

Overdetermined broadband spectroscopic Mueller matrix polarimeter designed by genetic algorithms.

This paper reports on the design and implementation of a liquid crystal variable retarder based overdetermined spectroscopic Mueller matrix polarimeter, with parallel processing of all wavelengths. The system was designed using a modified version of a recently developed genetic algorithm [Letnes et al. Opt. Express 18, 22, 23095 (2010)]. A generalization of the eigenvalue calibration method is reported that allows the calibration of such overdetermined polarimetric systems. Out of several possible designs, one of the designs was experimentally implemented and calibrated. It is reported that the instrument demonstrated good performance, with a measurement accuracy in the range of 0.1% for the measurement of air.

Fast and optimal broad-band Stokes/Mueller polarimeter design by the use of a genetic algorithm.

A fast multichannel Stokes/Mueller polarimeter with no mechanically moving parts has been designed to have close to optimal performance from 430-2000 nm by applying a genetic algorithm. Stokes (Mueller) polarimeters are characterized by their ability to analyze the full Stokes (Mueller) vector (matrix) of the incident light (sample). This ability is characterized by the condition number, κ, which directly influences the measurement noise in polarimetric measurements. Due to the spectral dependence of the retardance in birefringent materials, it is not trivial to design a polarimeter using dispersive components. We present here both a method to do this optimization using a genetic algorithm, as well as simulation results. Our results include fast, broad-band polarimeter designs for spectrographic use, based on 2 and 3 Ferroelectric Liquid Crystals, whose material properties are taken from measured values. The results promise to reduce the measurement noise significantly over previous designs, up to a factor of 4.5 for a Mueller polarimeter, in addition to extending the spectral range.