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Genome Biol ; 18(1): 114, 2017 06 15.
Article in English | MEDLINE | ID: mdl-28619072

ABSTRACT

BACKGROUND: Plant adaptive responses to changing environments involve complex molecular interplays between intrinsic and external signals. Whilst much is known on the signaling components mediating diurnal, light, and temperature controls on plant development, their influence on chromatin-based transcriptional controls remains poorly explored. RESULTS: In this study we show that a SWI/SNF chromatin remodeler subunit, BAF60, represses seedling growth by modulating DNA accessibility of hypocotyl cell size regulatory genes. BAF60 binds nucleosome-free regions of multiple G box-containing genes, opposing in cis the promoting effect of the photomorphogenic and thermomorphogenic regulator Phytochrome Interacting Factor 4 (PIF4) on hypocotyl elongation. Furthermore, BAF60 expression level is regulated in response to light and daily rhythms. CONCLUSIONS: These results unveil a short path between a chromatin remodeler and a signaling component to fine-tune plant morphogenesis in response to environmental conditions.


Subject(s)
Arabidopsis Proteins/genetics , Basic Helix-Loop-Helix Transcription Factors/genetics , Chromosomal Proteins, Non-Histone/genetics , DNA-Binding Proteins/genetics , Hypocotyl/growth & development , Seedlings/genetics , Transcription Factors/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Chromatin Assembly and Disassembly , DNA, Plant/genetics , Gene Expression Regulation, Plant , Hypocotyl/genetics , Nucleosomes/genetics , Seedlings/growth & development
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