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1.
Water Res ; 257: 121686, 2024 Jun 15.
Article in English | MEDLINE | ID: mdl-38705065

ABSTRACT

This study developed a new process that stably produced ammonium nitrate (NH4NO3), an important and commonly used fertilizer, from the source-separated urine by comammox Nitrospira. In the first stage, the complete conversion of ammonium to nitrate was achieved by comammox Nitrospira. In this scenario, the pH was maintained at 6 by adding external alkali, which also provided sufficient alkalinity for full nitrification. In the second stage, the NH4NO3 was produced directly by comammox Nitropsira by converting half of the ammonium in urine into nitrate. In this case, no alkali was added and pH automatically dropped and self-maintained at an extremely acidic level (pH 3-4). In both scenarios, negligible nitrite accumulation was observed, while the final product of the second stage contained ammonium and nitrate at the molar ratio of 1:1. The dominance of comammox Nitrospira over canonical ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) was systematically proved by the combination of 16S rRNA gene amplicon sequencing, quantitative polymerase chain reaction, and metagenomics. Notably, metagenomic sequencing suggested that the relative abundance of comammox Nitrospira was over 20 % under the acidic condition at pH 3-4, while canonical AOB and NOB were undetectable. Batch experiments showed that the optimal pH for the enriched comammox Nitrospira was ∼7, which could sustain their activity in a wider pH range from 4 to 8 surprisingly but lost activity at pH 3 and 9. The findings not only present an application potential of comammox Nitrospira in nitrogen recovery from urine wastewater but also report the survivability of comammox bacteria in acidic environments.


Subject(s)
Ammonia , Nitrates , Oxidation-Reduction , Nitrates/metabolism , Hydrogen-Ion Concentration , Ammonia/metabolism , Urine/chemistry , Bacteria/metabolism , Nitrification , RNA, Ribosomal, 16S
2.
Microorganisms ; 12(4)2024 Mar 26.
Article in English | MEDLINE | ID: mdl-38674598

ABSTRACT

Multi-drug resistance of bacteria producing extended-spectrum ß-lactamase (ESBL) is a public health challenge. Thus, this study aimed to investigate the antimicrobial susceptibility of ESBL-producing Escherichia coli (ESBL-EC) in Hunan Province, China. A total of 1366 fecal samples were collected from pig, chicken, and cattle farms over a six-year period, which were assessed using strain isolation, 16S rRNA identification, polymerase chain reaction, drug sensitivity testing, whole-genome sequencing, and bioinformatics analysis. The results showed an overall prevalence of 6.66% for ESBL-EC strains, with ESBL positivity extents for pigs, chickens, and cattle isolates at 6.77%, 6.54%, and 12.5%, respectively. Most ESBL-EC isolates were resistant to cefotaxime, tetracycline, and trimethoprim-sulfamethoxazole; however, all the isolates were susceptible to meropenem, with relatively low resistance to amikacin and tigecycline. Various multi-locus sequence types with different origins and similar affinities were identified, with ST155 (n = 16) being the most common subtype. Several types of resistance genes were identified among the 91 positive strains, with beta-lactamase blaCTX-M-55 being the most common ESBL genotype. IncFIB was the predominant plasmid type. Widespread use of antibiotics in animal farming may increase antibiotic resistance, posing a serious threat to the health of farmed animals and, thus, to human food security and health.

3.
Int J Mol Sci ; 24(20)2023 Oct 23.
Article in English | MEDLINE | ID: mdl-37895172

ABSTRACT

Bacterial antibiotic resistance, especially the emergence of multidrug-resistant (MDR) strains, urgently requires the development of effective treatment strategies. It is always of interest to delve into the mechanisms of resistance to current antibiotics and target them to promote the efficacy of existing antibiotics. In recent years, non-antibiotic compounds have played an important auxiliary role in improving the efficacy of antibiotics and promoting the treatment of drug-resistant bacteria. The combination of non-antibiotic compounds with antibiotics is considered a promising strategy against MDR bacteria. In this review, we first briefly summarize the main resistance mechanisms of current antibiotics. In addition, we propose several strategies to enhance antibiotic action based on resistance mechanisms. Then, the research progress of non-antibiotic compounds that can promote antibiotic-resistant bacteria through different mechanisms in recent years is also summarized. Finally, the development prospects and challenges of these non-antibiotic compounds in combination with antibiotics are discussed.


Subject(s)
Anti-Bacterial Agents , Drug Resistance, Multiple, Bacterial , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Bacteria , Drug Resistance, Bacterial , Microbial Sensitivity Tests
4.
Antibiotics (Basel) ; 12(7)2023 Jul 12.
Article in English | MEDLINE | ID: mdl-37508274

ABSTRACT

Non-typhoidal Salmonella (NTS) is a foodborne pathogen and a prevalent causative agent for disease outbreaks globally. The Salmonella enterica serovar 4,[5],12:i:- (S.4,[5],12:i:-) belongs to the monophasic variant of Salmonella typhimurium, which is of current global concern. In this study, the epidemiology and genomic characterization of S. 4,[5],12:i:- isolates from 17 livestock farms in Hunan Province between 2019 and 2020, as well as their susceptibility to 14 antimicrobial agents, were profiled. Twelve Salmonella serotypes were identified using the White-Kauffmann-Le Minor scheme, and whole-genome sequencing analyses were conducted based on these isolates. Overall, 107 Salmonella strains were isolated, of which 73% (78/107) were multidrug resistant. Resistance to tetracycline (85.05%) was found to be the most prevalent, followed by the oqxAB and aac(6')-Ib-cr genes. S. typhimurium (monophasic) 4,[5],12:i:- was the most common serotype, followed by S. typhimurium and S. derby. Most antimicrobial-resistant strains were isolated from pigs, indicating that they could be important reservoirs of resistant non-typhoidal Salmonella strains. The presence of similar genetic environments in S. 4,[5],12:i:- indicates both vertical and horizontal transmission of resistance plasmids, which may promote the spread of drug resistance genes. Appropriate measures should be taken to curb the prevalence of S. 4,[5],12:i:-.

5.
Antibiotics (Basel) ; 12(1)2023 Jan 11.
Article in English | MEDLINE | ID: mdl-36671348

ABSTRACT

BACKGROUND: The plasmid-mediated tigecycline resistance gene tet(X4) confers a high level of resistance to tigecycline. The experiment aims to investigate the prevalence and characterization of tet(X4) in Escherichia coli isolates from chicken and pig farms in Hunan province, China. METHODS: A total of six tet(X4) positive strains were identified in 257 E. coli derived from chicken samples in Xiangtan city (n = 2), pig samples in Xiangxiang city (n = 1), Chenzhou city (n = 2), and Zhuzhou city (n = 1). The presence of tet(X4) was directly detected by PCR assay, and then the broth dilution method determined the antimicrobial susceptibility profile of the tet(X4)-positive isolates. Genomic locations were identified by whole-genome sequencing (WGS) and bioinformatics. RESULTS: Almost all tet(X4)-positive strains showed high resistance to multidrug, including tigecycline. Resistome analysis revealed many antibiotic resistance genes, including those with resistance to tetracyclines, ß-lactams, phenicols, quinolones, lincosamides chloramphenicol, aminoglycosides and sulfamids. These tet(X4)-bearing strains exhibited six distract STs, such as ST10, 202, ST218, ST362, ST2077, ST7068. The plasmid replicon types carrying tet(X4) were the hybrid plasmid IncFIA(HI1)/IncHIA/IncHIB(R27) (5/6) and IncX1 (1/6). CONCLUSIONS: The presence of similar genetic environments in E. coli from different cities suggests there may be horizontal transmission pathways promoting the broad spread of drug-resistant genes in Hunan Province, putting great pressure on multidrug resistance monitoring.

6.
J Pathol Clin Res ; 9(2): 121-128, 2023 03.
Article in English | MEDLINE | ID: mdl-36424637

ABSTRACT

Siglec-15, a novel immune suppressor, is upregulated in many human cancers. The aim of this study was to explore the expression of Siglec-15 in colorectal cancer (CRC), and investigate whether Siglec-15 could be a potential target for cancer immunotherapy in patients with CRC. We performed immunohistochemical analyses of Siglec-15 on a cohort of 805 patients with CRC and made comparisons between clinicopathological characteristics, PD-L1 expression, CD3, CD8, CD45RO tumor-infiltrating lymphocytes (TILs), and prognosis. We found that Siglec-15 expression was commonly detected in tumor cells (48.3%) and tumor-associated stromal cells (33.4%), and was more frequently observed than PD-L1 expression in tumor cells. In contrast, Siglec-15 expression was weakly and scarcely found in normal mucosa (13%). Siglec-15 overexpression in tumor cells was associated with advanced TNM stage (p = 0.020). Co-expression of Siglec-15 and PD-L1 in tumor cells was found in 14.4% of patients, and Siglec-15 expression was detected in almost half of PD-L1 negative cases. Elevated Siglec-15 expression in tumor and stromal cells was associated with sparser CD45RO and CD8 TILs (p = 0.035 and p = 0.004, respectively). The expression of Siglec-15 did not have prognostic significance. In summary, compared to PD-L1, Siglec-15 protein expression is more prevalent in CRC and is associated with advanced disease stage and fewer TILs. These findings support Siglec-15 as a potential cancer immunotherapy target, in addition to PD-1/PD-L1 inhibitors, in patients with CRC.


Subject(s)
Colorectal Neoplasms , Lymphocytes, Tumor-Infiltrating , Sialic Acid Binding Immunoglobulin-like Lectins , Humans , B7-H1 Antigen/genetics , B7-H1 Antigen/metabolism , Prognosis , Sialic Acid Binding Immunoglobulin-like Lectins/metabolism
7.
Front Microbiol ; 13: 1002827, 2022.
Article in English | MEDLINE | ID: mdl-36386648

ABSTRACT

The mobile colistin-resistance (mcr)-1 gene is primarily detected in Enterobacteriaceae species, such as Escherichia coli and Salmonella enterica, and represents a significant public health threat. Herein, we investigated the prevalence and characteristics of mcr-1-positive E. coli (MCRPEC) in hospitalized companion animals in a pet hospital in Shanghai, China, from May 2021 to July 2021. Seventy-nine non-duplicate samples were collected from the feces (n = 52) and wounds (n = 20) of cats and dogs and the surrounding hospital environment (n = 7). Seven MCRPEC strains, identified using screening assays and polymerase chain reaction, exhibited multidrug-resistant phenotypes in broth-microdilution and agar-dilution assays. Based in whole-genome sequencing and bioinformatics analyses, all seven isolates were determined to belong to sequence type (ST) 117. Moreover, the Incl2 plasmid was prevalent in these MCRPEC isolates, and the genetic environment of the seven E. coli strains was highly similar to that of E. coli SZ02 isolated from human blood. The isolates also harbored the ß-lactamase gene bla CTX-M-65, and florfenicol resistance gene floR, among other resistance genes. Given that horizontal transfer occurred in all seven strains, E. coli plasmid transferability may accelerate the emergence of multidrug-resistant bacteria and may be transmitted from companion animals to humans. Therefore, the surveillance of MCRPEC isolates among companion animals should be strengthened.

8.
Front Microbiol ; 13: 1032969, 2022.
Article in English | MEDLINE | ID: mdl-36312957

ABSTRACT

Aeromonas hydrophila is an important zoonotic pathogen responsible for septicemia, diarrhea and gastroenteritis, and has attracted considerable attention. The EnvZ/OmpR two-component system (TCS) mediates environmental stress responses in gram-negative bacteria. We investigated the role of the TCS in A. hydrophila by comparing the characteristics of the parental (23-C-23), EnvZ/OmpR knockout (23-C-23:ΔEnvZ/OmpR), and complemented strains (23-C-23:CΔEnvZ/OmpR). Under non-stress conditions, the 23-C-23:ΔEnvZ/OmpR strain showed a significant decrease in growth rate compared to that of 23-C-23. Transcriptome and metabonomic analysis indicated that many metabolic pathways were remarkably affected in the ΔEnvZ/OmpR strain, including the TCA cycle and arginine biosynthesis. In addition, the virulence of the ΔEnvZ/OmpR strain was attenuated in a Kunming mouse model. The ΔEnvZ/OmpR strain exhibited notably reduced tolerance to environmental stresses, including high temperature, different pH conditions, oxidative stress, and high osmotic stress. The downregulated expression of genes related to cell metabolism, motility, and virulence in the ΔEnvZ/OmpR mutant strain was further validated by real-time quantitative PCR. Consequently, our data suggest that the EnvZ/OmpR TCS is required for growth, motility, virulence, and stress response in A. hydrophila, which has significant implications in the development of novel antibacterial and vaccine therapies targeting EnvZ/OmpR against A. hydrophila.

9.
Comput Intell Neurosci ; 2022: 3650702, 2022.
Article in English | MEDLINE | ID: mdl-36045997

ABSTRACT

Winter wheat is one of the most important food products. Increasing food demand and limited land resources have forced the development of agricultural production to be more refined and efficient. The most important part of agricultural production is sowing. With the promotion of precision agriculture, precision seeding has become the main component of modern agricultural seeding technology system, and the adoption of precision seeding technology is an important means of large-scale production and cost saving and efficiency enhancement. However, the current sowing technology and sowing equipment cannot meet the requirements of wheat sowing accuracy. In this context, a differential perturbation particle swarm optimization (DPPSO) algorithm is proposed by embedding differential perturbation into particle swarm optimization, which shows fast convergence speed and good global performance. After that the DPPSO is used to optimize the convolutional neural network (CNN) to build an optimized CNN (DPPSO-CNN) model and applied to the field of crops fine sowing. Finally, the experimental results show that the proposed method not only has a faster convergence rate but also achieves better wheat seeding performance. The research of this paper an effectively improves the accuracy and uniformity of wheat seeding and lay a foundation for improving wheat yield per unit area and promotes the intelligent development of agriculture in the future.


Subject(s)
Agriculture , Triticum , Agriculture/methods , Algorithms , Neural Networks, Computer , Seasons
10.
Vet Med Sci ; 8(6): 2460-2465, 2022 11.
Article in English | MEDLINE | ID: mdl-36130135

ABSTRACT

BACKGROUND: Tigecycline is regarded as a last-resort antimicrobial agent against multidrug resistance (MDR). However, resistance-nodulation-division efflux pump resistance genes, such as tmexCD3-toprJ3, that confer resistance to tigecycline have emerged. OBJECTIVES: This study aimed to characterise the tmexCD3-toprJ3 gene cluster in Pseudomonas juntendi and Proteus terrae isolated from a pig farm. METHODS: Samples were obtained from a Chinese piggery and included 92 pig faecal samples, 56 wastewater samples, 23 drinking water samples, 28 sow vagina samples and nine sow uterus swabs. The presence of tmexCD3-toprJ3 was detected using a polymerase chain reaction assay, and the antimicrobial susceptibility profile of the tmexCD3-toprJ3-positive isolates was determined using the broth dilution method. Genomic locations were identified using whole-genome sequencing and bioinformatics. RESULTS: We identified two tmexCD3-toprJ3-positive isolates, and both isolates were highly resistant to antibiotics such as tigecycline. In addition, we identified several mobile elements (ISPa7, ISCfr1, ISVsa3) and insertion sequences (TnAs2, TnAs3) in tmexCD3-toprJ3-positive isolates that could increase the potential for the spread of MDR. CONCLUSIONS: To the best of our knowledge, this study is the first to report the detection of tmexCD3-toprJ3 in P. juntendi and P. terrae isolated from a pig farm.


Subject(s)
Pseudomonas , Swine , Animals , Female , Tigecycline , Microbial Sensitivity Tests/veterinary , Farms
11.
Sci Rep ; 12(1): 13952, 2022 08 17.
Article in English | MEDLINE | ID: mdl-35977984

ABSTRACT

This study aimed to establish a nomogram for the prediction of cancer-specific survival (CSS) of CRC patients with synchronous LM. The final prognostic nomogram based on prognostic factors was evaluated by concordance index (C-index), time-dependent receiver operating characteristic curves, and calibration curves. In the training and validation groups, the C-index for the nomogram was 0.648 and 0.638, and the AUC was 0.793 and 0.785, respectively. The high quality of the calibration curves in the nomogram models for CSS at 1-, 3-, and 5-year was observed. The nomogram model provided a conventional and useful tool to evaluate the 1-, 3-, and 5-year CSS of CRC patients with synchronous LM.


Subject(s)
Colorectal Neoplasms , Lung Neoplasms , Colorectal Neoplasms/pathology , Humans , Lung Neoplasms/pathology , Neoplasm Staging , Nomograms , Prognosis , SEER Program
12.
Antibiotics (Basel) ; 11(8)2022 Aug 06.
Article in English | MEDLINE | ID: mdl-36009937

ABSTRACT

The emergence of the mobile tigecycline-resistance gene, tet(X4), poses a significant threat to public health. To investigate the prevalence and genetic characteristics of the tet(X4)-positive Escherichia coli in humans, 1101 human stool samples were collected from a tertiary class-A hospital in Beijing, China, in 2019. Eight E. coli isolates that were positive for tet(X4) were identified from clinical departments of oncology (n = 3), hepatology (n = 2), nephrology (n = 1), urology (n = 1), and general surgery (n = 1). They exhibited resistance to multiple antibiotics, including tigecycline, but remained susceptible to meropenem and polymyxin B. A phylogenetic analysis revealed that the clonal spread of four tet(X4)-positive E. coli from different periods of time or departments existed in this hospital, and three isolates were phylogenetically close to the tet(X4)-positive E. coli from animals and the environment. All tet(X4)-positive E. coli isolates contained the IncX1-plasmid replicon. Three isolates successfully transferred their tigecycline resistance to the recipient strain, C600, demonstrating that the plasmid-mediated horizontal gene transfer constitutes another critical mechanism for transmitting tet(X4). Notably, all tet(X4)-bearing plasmids identified in this study had a high similarity to several plasmids recovered from animal-derived strains. Our findings revealed the importance of both the clonal spread and horizontal gene transfer in the spread of tet(X4) within human clinics and between different sources.

13.
Front Microbiol ; 13: 918634, 2022.
Article in English | MEDLINE | ID: mdl-35832814

ABSTRACT

Feammox-based nitrogen removal technology can reduce energy consumption by aeration and emission of carbon dioxide. However, the huge theoretical demand for Fe(III) becomes a challenge for the further development of Feammox. This study investigated an anammox-derived Feammox process with an intermittent dosage of Fe2O3 and proposed a novel approach to reduce the Fe(III) consumption. The results showed that anammox genera Candidatus Brocadia and Candidatus Kuenenia in the seed anammox sludge significantly decreased after cultivation. The formation of N2 was the dominating pathway in Feammox while that of nitrite and nitrate could be neglected. Batch tests showed that specific Feammox activity of ammonium oxidation was 1.14-9.98 mg N/(g VSS·d). The maximum removal efficiency of ammonium reached 52.3% in the bioreactor with a low dosage of Fe(III) which was only 5.8% of the theoretical demand in Feammox. The removal of ammonium was mainly achieved through Feammox, while partial nitrification/anammox also played a role due to the non-power and unintentional oxygen leakage. The super-low oxygen also responded to the low demand of Fe(III) in the bioreactor because it could trigger the cycle of Fe(III)/Fe(II) by coupling Feammox and chemical oxidation of Fe(II) to Fe(III). Therefore, anammox-derived Feammox can achieve the removal of ammonium with low Fe(III) demand at super-low oxygen.

14.
Antibiotics (Basel) ; 11(6)2022 May 25.
Article in English | MEDLINE | ID: mdl-35740120

ABSTRACT

Antibiotics have been extensively used to ensure the productivity of animals on intensive livestock farms. Accordingly, antimicrobial-resistant organisms, which can be transmitted to humans via the food chain, pose a threat to public health. The Enterobacterium antimicrobial resistance gene, blaNDM-1, is a transmissible gene that has attracted widespread attention. Here, we aimed to investigate the prevalence of Enterobacteriaceae carrying blaNDM-1 on an intensive pig farm. A total of 190 samples were collected from a pig farm in Hunan Province, China. Resistant isolates were selected using MacConkey agar with meropenem and PCR to screen for blaNDM-1-positive isolates. Positive strains were tested for conjugation, antimicrobial susceptibility, and whole-genome sequencing. Four blaNDM-1-positive Providencia strains were obtained, and multidrug resistance was observed in these strains. The structure carrying blaNDM-1 did not conjugate to E. coli J53 after three repeated conjugation assays. This suggests that, in intensive farming, attention should be focused on animal health and welfare to reduce the frequency of antibiotic usage. Carbapenem-resistant Enterobacteriaceae in the breeding industry should be included in systematic monitoring programs, including animal, human, and environmental monitoring programs.

15.
Int J Food Microbiol ; 378: 109820, 2022 Oct 02.
Article in English | MEDLINE | ID: mdl-35752017

ABSTRACT

This study, a part of the China national surveillance program on antimicrobial resistance in zoonotic bacteria, was to determine the phenotypic and genomic characteristics of endemic pig-associated Staphylococcus aureus ST398 strains in China. A total of 68 (48.9 %) S. aureus strains were recovered from 139 samples collected from two pig farms and one slaughterhouse in Qinghai province. Genomic characterization of All S. aureus strains was performed by WGS and their evolutionary relationships were assessed by phylogenetic analysis. Their susceptibilities to antimicrobials were determined using the broth dilution method. All S. aureus strains consisted of 41 ST398-t571 MSSA, 26 ST398-t011 MRSA and 1 ST5-t002 MRSA. Among these, ST398 was frequently identified in 67 S. aureus strains, suggesting that ST398 was a frequent source of MRSA and MSSA infections in Qinghai province and its possibility of transmission between individuals in pigs from farms and slaughterhouse. Meanwhile, Livestock-associated-MRSA ST398 in our study was establishing closely evolutionary relationships with MRSA ST 398 in Europe and Australia. The clues about closely relatedness of the global S. aureus ST398 underscore the potential public health risk of S. aureus ST398 in the pork supply chain and offer significant guidance for veterinary and human health.


Subject(s)
Methicillin-Resistant Staphylococcus aureus , Staphylococcal Infections , Animals , Humans , Livestock , Methicillin-Resistant Staphylococcus aureus/genetics , Microbial Sensitivity Tests , Phylogeny , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology , Staphylococcal Infections/veterinary , Staphylococcus aureus/genetics , Swine
16.
Front Microbiol ; 13: 840520, 2022.
Article in English | MEDLINE | ID: mdl-35464934

ABSTRACT

Colistin is one of the last-line drugs against difficult to treat and multidrug-resistant Gram-negative bacteria. The emergence of mobile colistin resistance gene mcr-1 increased worldwide attention on colistin resistance. mcr-1 is the dominant gene that caused resistance to colistin in chicken-derived Escherichia coli (E. coli) in China; it has a broad resistance spectrum and causes multiple drug resistance problems. There are only few studies on mcr-positive E. coli (MCRPEC) from laying ducks and quails in China. Here, the molecular and epidemiological characteristics of MCRPEC from three kinds of poultry farms (laying duck, quail, and broiler) were investigated in Changsha, China. A total of 17 mcr-positive E. coli (MCRPEC) strains were screened in 690 samples from the three kinds of poultry farms. This is the first report on MCRPEC, to our best knowledge, derived from quail. All the MCRPEC strains were resistant to colistin, sulfamethoxazole-trimethoprim, florfenicol, tetracycline, and ciprofloxacin, and mildly resistant to tigecycline, gentamicin, piperacillin/tazobactam, cefotaxime, and ceftiofur. All the strains were sensitive to meropenem and amikacin. By bioinformatics analysis, 17 MCRPEC strains belonging to 11 MLST types were distributed in phylogroups A (58.8%), B1 (23.5%), and phylogroup D (17.6%). mcr-1 was located in IncI2 plasmid with typical plasmid conjugation transfer part, type IV secretory system, and tellurium-resistant protein, increasing transmission capacity to other bacteria. Monitoring of colistin-resistant bacteria in poultry farms should be strengthened.

17.
J Integr Neurosci ; 21(2): 56, 2022 Mar 22.
Article in English | MEDLINE | ID: mdl-35364644

ABSTRACT

The long short-term memory network (LSTM) is widely used in time series data processing as a temporal recursive network. The resting-state functional magnetic resonance data shows that not only are there temporal variations in the resting state, but there are also interactions between brain regions. To integrate the temporal and spatial characteristics of brain regions, this paper proposes a model called feature weighted-LSTM (FW-LSTM). The feature weight is defined by spatial characteristics calculating the frequency of connectivity of each brain region and further integrated into the LSTM. Thus, it can comprehensively model both temporal and spatial changes in rs-fMRI brain regions. The FW-LSTM model on the Alzheimer's disease neuroimaging initiative (ADNI) dataset is used to extract the time-varying characteristics of 90 brain regions for Alzheimer's disease (AD) classification. The model performances are 77.80%, 76.41%, and 78.81% in accuracy, sensitivity, and specificity. It outperformed the one-dimensional convolutional neural networks (1D-CNN) model and LSTM model, which only used temporal features of brain regions.


Subject(s)
Alzheimer Disease , Magnetic Resonance Imaging , Alzheimer Disease/pathology , Brain , Humans , Magnetic Resonance Imaging/methods , Neural Networks, Computer , Neuroimaging
18.
Hypertens Pregnancy ; 41(2): 116-125, 2022 May.
Article in English | MEDLINE | ID: mdl-35354421

ABSTRACT

Animal experiments showed that PIH rats had increased mean arterial pressure (MAP), systolic blood pressure (SBP), and diastolic blood pressure (DBP), but decreased litter size, number of viable fetuses, fetal weight, and placental weight. The higher Flt-1 and lower VEGF was observed in PIH rats with elevated TNF-α and IL-6 levels and decreased IL-10 levels. Treatment with agomiR-140-5p improved regarding the above indicators. Cell experiments demonstrated that miR-140-5p mimic increased cell invasion and migration abilities and decreased the activity of TGF-ß/Smad pathway, while TGFBR1 can reverse the role of miR-140-5p mimic in trophoblasts.


Subject(s)
Hypertension, Pregnancy-Induced , MicroRNAs , Animals , Female , Humans , MicroRNAs/metabolism , Placenta/metabolism , Pregnancy , Rats , Signal Transduction , Transforming Growth Factor beta/metabolism
19.
Vet Med Sci ; 8(3): 1294-1299, 2022 05.
Article in English | MEDLINE | ID: mdl-35182454

ABSTRACT

BACKGROUND: Wildlife zoos provide the opportunity for children and adults to interact with animals, However, it's unknown that the risk of contact with animals, which carried zoonotic pathogens and antimicrobial resistant bacteria. OBJECTIVES: This study aimed to investigate the prevalence and antimicrobial susceptibility of extended-spectrum ß-lactamases Escherichia coli (ESBLs-EC) from a wildlife zoo in China. METHODS: A total of 93 wildlife faecal samples were collected from a wildlife zoo. Agar dilution method was used to determine the resistant phenotype. Whole genomes sequencing and bioinformatic analysis were employed to evaluate the molecular typing and genetic relationships of ESBLs-EC. RESULTS: A total of 23 CTX-M-positive ESBLs-EC were isolated from swan (n = 14), squirrel monkey (n = 5), black hat hanging monkey (n = 2), gibbon monkey (n = 1) and phoenicopteridae (n = 1) respectively. All ESBLs-EC strains were resistant to cefotaxime, tetracycline, ciprofloxacin and trimethoprim-sulfamethoxazole, but susceptible to colistin, tigecycline, meropenem and amikacin. By screening whole genome sequences, ESBLs-EC strains main carried blaCTX-M-55 (34.8%, 8/23) and blaCTX-M-14 (26.0%, 6/23), following by blaCTX-M-27 (21.7%, 5/23), blaCTX-M-15 (13.0%, 3/23) and blaCTX-M-121 (4.3%, 1/23). ESBLs-EC strains mainly belonged to phylogroup A (60.9%, 14/23), and ST48, ST746 and ST616 (3 strains respectively, 13.0%) were major ST types. Core genome-based single nucleotide polymorphism (SNP) analysis suggested that strains from the swan, over the phylogenetic tree, have a closer genetic relationship with strains from other animals (black hat hanging monkey, gibbon monkey, phoenicopteridae and squirrel monkey). CONCLUSIONS: CTX-M type ESBLs-EC can transmit between animals in wildlife zoos, which may be a risk of spread to animal keepers, veterinarians and visitors when contact with animals. Our study provides that the importance of hygiene measures to minimise the risk of transmission of ESBLs-EC to visitors in wildlife zoos.


Subject(s)
Escherichia coli Infections , Escherichia coli , Animals , Animals, Wild , Anti-Bacterial Agents/pharmacology , China/epidemiology , Escherichia coli/genetics , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli Infections/veterinary , Phylogeny , Prevalence , beta-Lactamases/genetics
20.
Article in English | MEDLINE | ID: mdl-35162595

ABSTRACT

Accelerated land use and land cover changes affect regional landscape patterns and change the ecological environment, including soil conservation capabilities. This is not conducive to the sustainable development of human society. In this research, we explored the land use change pattern and landscape change pattern in western Hubei from 2000 to 2020. Using the Chinese soil loss equation and stepwise regression, we measure how landscape patterns affect soil erosion under land use and cover changes in western Hubei Province. The results show that average soil erosion in the mountainous areas of western Hubei tended to increase from 2000 to 2010 and decrease from 2010 to 2020; soil erosion was higher in the western than in the eastern part of the study area. The land in areas with high-intensity and low-intensity soil erosion was mainly waterfront/grassland and cropland/forestland, respectively, and the area of moderate to severe soil erosion was greatest when the slope was 10-20°. When the slope exceeded 20°, the soil erosion area of each grade tended to decrease; thus, 20° is the critical slope for soil erosion in the study area. The landscape pattern in mountainous areas changed dramatically from 2000 to 2020. At the landscape level, landscape fragmentation increased and connectivity decreased, but the area of landscape diversity was stable. Soil erosion in western Hubei was positively correlated with the contiguity index, aggregation index and largest patch index but negatively correlated with the Shannon evenness index. The higher the landscape fragmentation and the greater the accumulation of single land-use types, the more severe the soil erosion is, while the higher the landscape connectivity and the richer the landscape diversity, the less severe the soil erosion is. The results can inform regional landscape management and soil conservation research.


Subject(s)
Conservation of Natural Resources , Soil Erosion , China , Environmental Monitoring , Forests , Humans , Soil
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