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1.
PLoS Pathog ; 19(8): e1011577, 2023 08.
Article in English | MEDLINE | ID: mdl-37603540

ABSTRACT

Circular RNAs (circRNAs) are involved in various biological roles, including viral infection and antiviral immune responses. To identify influenza A virus (IAV) infection-related circRNAs, we compared the circRNA profiles of A549 cells upon IAV infection. We found that circVAMP3 is substantially upregulated after IAV infection or interferon (IFN) stimulation. Furthermore, IAV and IFN-ß induced the expression of QKI-5, which promoted the biogenesis of circVAMP3. Overexpression of circVAMP3 inhibited IAV replication, while circVAMP3 knockdown promoted viral replication, suggesting that circVAMP3 restricts IAV replication. We verified the effect of circVAMP3 on viral infection in mice and found that circVAMP3 restricted IAV replication and pathogenesis in vivo. We also found that circVAMP3 functions as a decoy to the viral proteins nucleoprotein (NP) and nonstructural protein 1 (NS1). Mechanistically, circVAMP3 interfered with viral ribonucleoprotein complex activity by reducing the interaction of NP with polymerase basic 1, polymerase basic 2, or vRNA and restored the activation of IFN-ß by alleviating the inhibitory effect of NS1 to RIG-I or TRIM25. Our study provides new insights into the roles of circRNAs, both in directly inhibiting virus replication and in restoring innate immunity against IAV infection.


Subject(s)
Influenza, Human , RNA, Circular , Vesicle-Associated Membrane Protein 3 , Animals , Humans , Mice , Influenza, Human/genetics , Interferons , Nucleoproteins , Nucleotidyltransferases , RNA, Circular/genetics , Vesicle-Associated Membrane Protein 3/genetics
2.
Micromachines (Basel) ; 13(4)2022 Mar 30.
Article in English | MEDLINE | ID: mdl-35457848

ABSTRACT

We demonstrate a hybrid laser microfabrication approach, which combines the technical merits of ultrafast laser-assisted chemical etching and carbon dioxide laser-induced in situ melting for centimeter-scale and bonding-free fabrication of 3D complex hollow microstructures in fused silica glass. With the developed approach, large-scale fused silica microfluidic chips with integrated 3D cascaded micromixing units can be reliably manufactured. High-performance on-chip mixing and continuous-flow photochemical synthesis under UV irradiation at ~280 nm were demonstrated using the manufactured chip, indicating a powerful capability for versatile fabrication of highly transparent all-glass microfluidic reactors for on-chip photochemical synthesis.

3.
J Am Chem Soc ; 143(17): 6447-6459, 2021 May 05.
Article in English | MEDLINE | ID: mdl-33878868

ABSTRACT

Connected vessel effects have been widely utilized from ancient times. It is quite interesting to know whether there are any special effects when single-crystal lattices fill the connected spaces inside 3D networks. In some single-crystal and 3D network pairs, there seems to exist a specific rule: when single-crystal lattices fill the connected spaces inside 3D networks, the front of the lattice in each channel is determined by the symmetrical center of the lattice structure. However, this needs to be validated by using various single-crystal lattice to fill the 3D networks with different compositions. Here we report a method to establish a gradient environment which can favor the formation of a micrometer-sized single crystal lattice across various 3D networks. The fronts of the filled lattices form the shapes which are the equilibrium shapes of the single crystals no matter what the single crystals or the 3D networks are, indicating the specific rule while the single-crystal lattices fill the 3D networks. The single crystals filled in the connected spaces inside 3D networks, which are functional materials, and had alternating properties, such as 4-fold higher electronic conductivity, which improve their performance in applications.

4.
J Gen Virol ; 101(12): 1242-1250, 2020 12.
Article in English | MEDLINE | ID: mdl-33016861

ABSTRACT

Post-translational modification plays a critical role in viral replication. Previously we reported that neddylation of PB2 of influenza A virus (IAV) can inhibit viral replication. However, we found that NEDD8 overexpression can still inhibit the replication of PB2 K699R mutant viruses, implying that other viral protein(s) can be neddylated. In this study, we revealed that M1 of IAV can also be modified by NEDD8. We found that the E3 ligase HDM2 significantly promotes M1 neddylation. Furthermore, we identified M1 K187 as the major neddylation site. We generated an IAV M1 K187R mutant (WSN-M1 K187R) and compared the growth of wild-type and mutant viruses in Madin-Darby canine kidney (MDCK) cells. The data showed that the replication of WSN-M1 K187R was more efficient than that of wild-type WSN. More importantly, we observed that overexpression of NEDD8 inhibited the replication of the wild-type WSN more effectively than that of WSN-M1 K187R. In addition, we found that the neddylation-deficient M1 mutant (M1 K187R) had a longer half-life than that of wild-type M1, indicating that the neddylation of M1 reduces stability. Then we performed a viral infection assay and found that WSN-M1 K187R exhibited greater virulence in mice than wild-type WSN, suggesting that the neddylation of M1 reduced IAV replication in vivo. In conclusion, we uncovered that neddylation of M1 by HDM2 negatively regulates the stability of M1, which in turn inhibits viral replication.


Subject(s)
Influenza A virus/physiology , NEDD8 Protein/metabolism , Orthomyxoviridae Infections/virology , Viral Matrix Proteins/metabolism , Virus Replication , Animals , Cell Line , Female , Humans , Influenza A virus/genetics , Influenza A virus/metabolism , Influenza A virus/pathogenicity , Lysine/genetics , Mice, Inbred BALB C , Orthomyxoviridae Infections/pathology , Protein Stability , Ubiquitin-Protein Ligases/metabolism , Viral Matrix Proteins/genetics , Virulence
5.
Nanomicro Lett ; 12(1): 31, 2020 Jan 21.
Article in English | MEDLINE | ID: mdl-34138238

ABSTRACT

Bio-inspired hierarchical self-assembly provides elegant and powerful bottom-up strategies for the creation of complex materials. However, the current self-assembly approaches for natural bio-compounds often result in materials with limited diversity and complexity in architecture as well as microstructure. Here, we develop a novel coordination polymerization-driven hierarchical assembly of micelle strategy, using phytic acid-based natural compounds as an example, for the spatially controlled fabrication of metal coordination bio-derived polymers. The resultant ferric phytate polymer nanospheres feature hollow architecture, ordered meso-channels of ~ 12 nm, high surface area of 401 m2 g-1, and large pore volume of 0.53 cm3 g-1. As an advanced anode material, this bio-derivative polymer delivers a remarkable reversible capacity of 540 mAh g-1 at 50 mA g-1, good rate capability, and cycling stability for sodium-ion batteries. This study holds great potential of the design of new complex bio-materials with supramolecular chemistry.

6.
J Virol ; 93(21)2019 11 01.
Article in English | MEDLINE | ID: mdl-31434735

ABSTRACT

Previously, we identified a set of long noncoding RNAs (lncRNAs) that were differentially expressed in influenza A virus (IAV)-infected cells. In this study, we focused on lnc-MxA, which is upregulated during IAV infection. We found that the overexpression of lnc-MxA facilitates the replication of IAV, while the knockdown of lnc-MxA inhibits viral replication. Further studies demonstrated that lnc-MxA is an interferon-stimulated gene. However, lnc-MxA inhibits the Sendai virus (SeV)- and IAV-induced activation of beta interferon (IFN-ß). A luciferase assay indicated that lnc-MxA inhibits the activation of the IFN-ß reporter upon stimulation with RIG-I, MAVS, TBK1, or active IRF3 (IRF3-5D). These data indicated that lnc-MxA negatively regulates the RIG-I-mediated antiviral immune response. A chromatin immunoprecipitation (ChIP) assay showed that the enrichment of IRF3 and p65 at the IFN-ß promoter in lnc-MxA-overexpressing cells was significantly lower than that in control cells, indicating that lnc-MxA interfered with the binding of IRF3 and p65 to the IFN-ß promoter. Chromatin isolation by RNA purification (ChIRP), triplex pulldown, and biolayer interferometry assays indicated that lnc-MxA can bind to the IFN-ß promoter. Furthermore, an electrophoretic mobility shift assay (EMSA) showed that lnc-MxA can form complexes with the IFN-ß promoter fragment. These results demonstrated that lnc-MxA can form a triplex with the IFN-ß promoter to interfere with the activation of IFN-ß transcription. Using a vesicular stomatitis virus (VSV) infection assay, we confirmed that lnc-MxA can repress the RIG-I-like receptor (RLR)-mediated antiviral immune response and influence the antiviral status of cells. In conclusion, we revealed that lnc-MxA is an interferon-stimulated gene (ISG) that negatively regulates the transcription of IFN-ß by forming an RNA-DNA triplex.IMPORTANCE IAV can be recognized as a nonself molecular pattern by host immune systems and can cause immune responses. However, the intense immune response induced by influenza virus, known as a "cytokine storm," can also cause widespread tissue damage (X. Z. J. Guo and P. G. Thomas, Semin Immunopathol 39:541-550, 2017, https://doi.org/10.1007/s00281-017-0636-y; S. Yokota, Nihon Rinsho 61:1953-1958, 2003; I. A. Clark, Immunol Cell Biol 85:271-273, 2007). Meanwhile, the detailed mechanisms involved in the balancing of immune responses in host cells are not well understood. Our studies reveal that, as an IFN-inducible gene, lnc-MxA functions as a negative regulator of the antiviral immune response. We uncovered the mechanism by which lnc-MxA inhibits the activation of IFN-ß transcription. Our findings demonstrate that, as an ISG, lnc-MxA plays an important role in the negative-feedback loop involved in maintaining immune homeostasis.


Subject(s)
Interferon-beta/genetics , Promoter Regions, Genetic , RNA, Long Noncoding/metabolism , Transcription, Genetic , A549 Cells , Binding Sites , Gene Expression , HEK293 Cells , Humans , Immunity, Innate , Interferon Regulatory Factor-3/metabolism , Interferon-beta/metabolism , Myxovirus Resistance Proteins/genetics , RNA, Long Noncoding/genetics , Transcription Factor RelA/metabolism , Virus Diseases/immunology , Virus Diseases/virology , Virus Replication , Viruses/classification , Viruses/immunology
7.
Korean J Parasitol ; 57(2): 101-115, 2019 Apr.
Article in English | MEDLINE | ID: mdl-31104402

ABSTRACT

The pathogenesis of cerebral malaria is biologically complex and involves multi-factorial mechanisms such as microvascular congestion, immunopathology by the pro-inflammatory cytokine and endothelial dysfunction. Recent data have suggested that a pleiotropic T-cell immunomodulatory protein (TIP) could effectively mediate inflammatory cytokines of mammalian immune response against acute graft-versus-host disease in animal models. In this study, we identified a conserved homologue of TIP in Plasmodium berghei (PbTIP) as a membrane protein in Plasmodium asexual stage. Compared with PBS control group, the pathology of experimental cerebral malaria (ECM) in rPbTIP intravenous injection (i.v.) group was alleviated by the downregulation of pro-inflammatory responses, and rPbTIP i.v. group elicited an expansion of regulatory T-cell response. Therefore, rPbTIP i.v. group displayed less severe brain pathology and feverish mice in rPbTIP i.v. group died from ECM. This study suggested that PbTIP may be a novel promising target to alleviate the severity of ECM.


Subject(s)
Immunologic Factors/administration & dosage , Malaria, Cerebral/prevention & control , Membrane Proteins/administration & dosage , Plasmodium berghei/immunology , Protozoan Proteins/administration & dosage , Recombinant Proteins/administration & dosage , Administration, Intravenous , Animals , Brain/pathology , Disease Models, Animal , Endothelial Cells/drug effects , Immunologic Factors/isolation & purification , Lymphocyte Activation , Malaria, Cerebral/pathology , Membrane Proteins/genetics , Membrane Proteins/isolation & purification , Mice, Inbred BALB C , Mice, Inbred C57BL , Plasmodium berghei/genetics , Protozoan Proteins/genetics , Protozoan Proteins/isolation & purification , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , T-Lymphocytes, Regulatory/drug effects , Treatment Outcome
8.
Angew Chem Int Ed Engl ; 58(22): 7431-7434, 2019 May 27.
Article in English | MEDLINE | ID: mdl-30924995

ABSTRACT

Harvesting energy directly in oceans by electrochemical devices is essential for driving underwater appliances such as underwater vehicles or detectors. Owing to the extreme undersea environment, it is important but difficult to use the devices with both a high energy density and power density simultaneously. Inspired by marine organisms that have switchable energy extraction modes (aerobic respiration for long-term living or anaerobic respiration to provide instantaneously high output power for fast movement), an auto-switchable dual-mode seawater energy extraction system is presented to provide high energy density and power density both by initiatively choosing different solutes in seawater as electron acceptors. With assistance from metal-organic frameworks, this device had a theoretical energy density of 3960 Wh kg-1 , and a high practical power density of 100±4 mW cm-2 with exceptional stability and low cost, making practical applications in seawater to be possible.

9.
Chempluschem ; 84(1): 85-91, 2019 Jan.
Article in English | MEDLINE | ID: mdl-31950736

ABSTRACT

Treatment of the SiMe3 -protected dichloro-rhenium carbyne complexes Re{≡CCH=C(R)C≡CSiMe3 }Cl2 (PMe2 Ph)3 (R = CMe3 , 1-adamantyl) with CsF in methanol directly afforded the 12-membered metallacycles {ReCl(PMe2 Ph)3 }2 {≡CCH=C(R)C≡C-}2 . The electronic structure of the metallacycle was investigated by density functional calculations. The UV-vis spectrum of the metallacycle shows a red-shifted band compared to that of the starting dichlorocarbyne complex. Treatment of {ReCl(PMe2 Ph)3 }2 {≡CCH=C(CMe3 )C≡C-}2 with HCl produced the dichloro-rhenium carbyne complex Re{≡CCH=C(CMe3 )C≡CH}Cl2 (PMe2 Ph)3 , which is consistent with the electronic structure of the 12-membered metallacycles.

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